RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 CCT8L1PA6NM43 557 aa12.54□□□□□ -0.4
VTI1A-209ENST00000496445 CLIC1O00299 241 aa12.54□□□□□ -0.4
VTI1A-209ENST00000496445 NR5A2O00482 541 aa12.54□□□□□ -0.4
VTI1A-209ENST00000496445 NPIPB7O75200 414 aa12.54□□□□□ -0.4
VTI1A-209ENST00000496445 TGDSO95455 350 aa12.54□□□□□ -0.4
VTI1A-209ENST00000496445 GPIP06744 558 aa12.54□□□□□ -0.4
VTI1A-209ENST00000496445 HOXC5Q00444 222 aa12.54□□□□□ -0.4
VTI1A-209ENST00000496445 PAGE3Q5JUK9 113 aa12.54□□□□□ -0.4
VTI1A-209ENST00000496445 C9orf135Q5VTT2 229 aa12.54□□□□□ -0.4
VTI1A-209ENST00000496445 PRAMEF8Q5VWM4 474 aa12.54□□□□□ -0.4
VTI1A-209ENST00000496445 PRAMEF7Q5VXH5 474 aa12.54□□□□□ -0.4
VTI1A-209ENST00000496445 BLOC1S3Q6QNY0 202 aa12.54□□□□□ -0.4
VTI1A-209ENST00000496445 SSX8Q7RTT4 187 aa12.54□□□□□ -0.4
VTI1A-209ENST00000496445 DTX2Q86UW9 622 aa12.54□□□□□ -0.4
VTI1A-209ENST00000496445 COMTD1Q86VU5 262 aa12.54□□□□□ -0.4
VTI1A-209ENST00000496445 WDR31Q8NA23 367 aa12.54□□□□□ -0.4
VTI1A-209ENST00000496445 OR9K2Q8NGE7 335 aa12.54□□□□□ -0.4
VTI1A-209ENST00000496445 BBS10Q8TAM1 723 aa12.54□□□□□ -0.4
VTI1A-209ENST00000496445 LRRC8CQ8TDW0 803 aa12.54□□□□□ -0.4
VTI1A-209ENST00000496445 ATP6V1G3Q96LB4 118 aa12.54□□□□□ -0.4
VTI1A-209ENST00000496445 MUS81Q96NY9 551 aa12.54□□□□□ -0.4
VTI1A-209ENST00000496445 CISD1Q9NZ45 108 aaKnown RBP12.54□□□□□ -0.4
VTI1A-209ENST00000496445 DCTN4Q9UJW0 460 aa12.54□□□□□ -0.4
VTI1A-209ENST00000496445 ABCA2Q9BZC7 2435 aa12.53□□□□□ -0.4
VTI1A-209ENST00000496445 TRBV5-3A0A0A0MS03 114 aa12.53□□□□□ -0.4
VTI1A-209ENST00000496445 TMEM247A6NEH6 219 aa12.53□□□□□ -0.4
VTI1A-209ENST00000496445 A8MVM7 634 aa12.53□□□□□ -0.4
VTI1A-209ENST00000496445 NDUFS7O75251 213 aa12.53□□□□□ -0.4
VTI1A-209ENST00000496445 IGHV4-39P01824 125 aa12.53□□□□□ -0.4
VTI1A-209ENST00000496445 ARAFP10398 606 aa12.53□□□□□ -0.4
VTI1A-209ENST00000496445 NCF2P19878 526 aaPredicted RBP12.53□□□□□ -0.4
VTI1A-209ENST00000496445 ZNF83P51522 516 aa12.53□□□□□ -0.4
VTI1A-209ENST00000496445 AQP5P55064 265 aa12.53□□□□□ -0.4
VTI1A-209ENST00000496445 STX1BP61266 288 aa12.53□□□□□ -0.4
VTI1A-209ENST00000496445 COPZ1P61923 177 aa12.53□□□□□ -0.4
VTI1A-209ENST00000496445 KRTAP1-1Q07627 177 aa12.53□□□□□ -0.4
VTI1A-209ENST00000496445 TNK1Q13470 666 aa12.53□□□□□ -0.4
VTI1A-209ENST00000496445 ZSWIM7Q19AV6 140 aa12.53□□□□□ -0.4
VTI1A-209ENST00000496445 ZNF311Q5JNZ3 666 aa12.53□□□□□ -0.4
VTI1A-209ENST00000496445 C1orf140Q5VVS0 124 aa12.53□□□□□ -0.4
VTI1A-209ENST00000496445 B3GLCTQ6Y288 498 aa12.53□□□□□ -0.4
VTI1A-209ENST00000496445 GOLGA6L1Q8N7Z2 621 aa12.53□□□□□ -0.4
VTI1A-209ENST00000496445 SPDL1Q96EA4 605 aa12.53□□□□□ -0.4
VTI1A-209ENST00000496445 CCDC28BQ9BUN5 200 aa12.53□□□□□ -0.4
VTI1A-209ENST00000496445 PTDSS2Q9BVG9 487 aa12.53□□□□□ -0.4
VTI1A-209ENST00000496445 RAD21L1Q9H4I0 556 aa12.53□□□□□ -0.4
VTI1A-209ENST00000496445 IKZF5Q9H5V7 419 aa12.53□□□□□ -0.4
VTI1A-209ENST00000496445 PARPBPQ9NWS1 579 aa12.53□□□□□ -0.4
VTI1A-209ENST00000496445 CCDC167Q9P0B6 97 aa12.53□□□□□ -0.4
VTI1A-209ENST00000496445 VAPAQ9P0L0 249 aa12.53□□□□□ -0.4
VTI1A-209ENST00000496445 PRDM4Q9UKN5 801 aa12.53□□□□□ -0.4
VTI1A-209ENST00000496445 IFT52Q9Y366 437 aa12.53□□□□□ -0.4
VTI1A-209ENST00000496445 HIVEP2P31629 2446 aa12.53□□□□□ -0.4
VTI1A-209ENST00000496445 JMJD1CQ15652 2540 aa12.53□□□□□ -0.4
VTI1A-209ENST00000496445 HEATR1Q9H583 2144 aaKnown RBP12.52□□□□□ -0.4
VTI1A-209ENST00000496445 FTCDNL1E5RQL4 147 aa12.52□□□□□ -0.41
VTI1A-209ENST00000496445 E7EQL1 145 aa12.52□□□□□ -0.41
VTI1A-209ENST00000496445 PTNP21246 168 aa12.52□□□□□ -0.41
VTI1A-209ENST00000496445 CD40P25942 277 aa12.52□□□□□ -0.41
VTI1A-209ENST00000496445 EGR4Q05215 589 aa12.52□□□□□ -0.41
VTI1A-209ENST00000496445 CLEC12BQ2HXU8 276 aa12.52□□□□□ -0.41
VTI1A-209ENST00000496445 OR7E24Q6IFN5 339 aa12.52□□□□□ -0.41
VTI1A-209ENST00000496445 TMEM108Q6UXF1 575 aa12.52□□□□□ -0.41
VTI1A-209ENST00000496445 GPAT4Q86UL3 456 aa12.52□□□□□ -0.41
VTI1A-209ENST00000496445 C1orf162Q8NEQ5 155 aaPredicted RBP12.52□□□□□ -0.41
VTI1A-209ENST00000496445 NFKBIDQ8NI38 313 aa12.52□□□□□ -0.41
VTI1A-209ENST00000496445 SLC35B4Q969S0 331 aa12.52□□□□□ -0.41
VTI1A-209ENST00000496445 GTPBP3Q969Y2 492 aaKnown RBP12.52□□□□□ -0.41
VTI1A-209ENST00000496445 SF3B5Q9BWJ5 86 aaKnown RBP12.52□□□□□ -0.41
VTI1A-209ENST00000496445 SLCO5A1Q9H2Y9 848 aa12.52□□□□□ -0.41
VTI1A-209ENST00000496445 SLC17A5Q9NRA2 495 aa12.52□□□□□ -0.41
VTI1A-209ENST00000496445 ADPRHL2Q9NX46 363 aa12.52□□□□□ -0.41
VTI1A-209ENST00000496445 UPB1Q9UBR1 384 aa12.52□□□□□ -0.41
VTI1A-209ENST00000496445 GDF2Q9UK05 429 aaPredicted RBP12.52□□□□□ -0.41
VTI1A-209ENST00000496445 ZNF232Q9UNY5 417 aa12.52□□□□□ -0.41
VTI1A-209ENST00000496445 M0R1B8 84 aa12.51□□□□□ -0.41
VTI1A-209ENST00000496445 FZD7O75084 574 aa12.51□□□□□ -0.41
VTI1A-209ENST00000496445 PTAFRP25105 342 aa12.51□□□□□ -0.41
VTI1A-209ENST00000496445 HTR2AP28223 471 aa12.51□□□□□ -0.41
VTI1A-209ENST00000496445 MPGP29372 298 aa12.51□□□□□ -0.41
VTI1A-209ENST00000496445 PRKAR1BP31321 381 aa12.51□□□□□ -0.41
VTI1A-209ENST00000496445 ACVR1BP36896 505 aa12.51□□□□□ -0.41
VTI1A-209ENST00000496445 LGALS3BPQ08380 585 aa12.51□□□□□ -0.41
VTI1A-209ENST00000496445 VEZF1Q14119 521 aa12.51□□□□□ -0.41
VTI1A-209ENST00000496445 ETFDHQ16134 617 aa12.51□□□□□ -0.41
VTI1A-209ENST00000496445 GCNT6Q5T4J0 391 aa12.51□□□□□ -0.41
VTI1A-209ENST00000496445 C11orf71Q6IPW1 123 aa12.51□□□□□ -0.41
VTI1A-209ENST00000496445 KLHL17Q6TDP4 642 aa12.51□□□□□ -0.41
VTI1A-209ENST00000496445 DNM1P46Q6ZS02 220 aa12.51□□□□□ -0.41
VTI1A-209ENST00000496445 AAED1Q7RTV5 226 aa12.51□□□□□ -0.41
VTI1A-209ENST00000496445 EPHX4Q8IUS5 362 aa12.51□□□□□ -0.41
VTI1A-209ENST00000496445 C17orf78Q8N4C9 275 aa12.51□□□□□ -0.41
VTI1A-209ENST00000496445 MAPK1IP1LQ8NDC0 245 aa12.51□□□□□ -0.41
VTI1A-209ENST00000496445 STK35Q8TDR2 534 aa12.51□□□□□ -0.41
VTI1A-209ENST00000496445 TRMT61AQ96FX7 289 aaKnown RBP12.51□□□□□ -0.41
VTI1A-209ENST00000496445 TAPBPLQ9BX59 468 aa12.51□□□□□ -0.41
VTI1A-209ENST00000496445 C1QTNF6Q9BXI9 259 aa12.51□□□□□ -0.41
VTI1A-209ENST00000496445 GRIP2Q9C0E4 1043 aa12.51□□□□□ -0.41
VTI1A-209ENST00000496445 PIF1Q9H611 641 aa12.51□□□□□ -0.41
VTI1A-209ENST00000496445 ARMC7Q9H6L4 198 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms