RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 PARPBPQ9NWS1 579 aa14.57□□□□□ -0.08
SF3A1-209ENST00000496189 MAGEL2Q9UJ55 1249 aa14.57□□□□□ -0.08
SF3A1-209ENST00000496189 RPS6KA6Q9UK32 745 aa14.57□□□□□ -0.08
SF3A1-209ENST00000496189 NOSIPQ9Y314 301 aaKnown RBP14.57□□□□□ -0.08
SF3A1-209ENST00000496189 SH3GLB1Q9Y371 365 aa14.57□□□□□ -0.08
SF3A1-209ENST00000496189 CACNA1DQ01668 2161 aa14.57□□□□□ -0.08
SF3A1-209ENST00000496189 A0A1B0GWA3 101 aa14.56□□□□□ -0.08
SF3A1-209ENST00000496189 M0R3H8 397 aa14.56□□□□□ -0.08
SF3A1-209ENST00000496189 OR2T1O43869 369 aa14.56□□□□□ -0.08
SF3A1-209ENST00000496189 ZNF682O95780 498 aa14.56□□□□□ -0.08
SF3A1-209ENST00000496189 TCN1P20061 433 aaPredicted RBP14.56□□□□□ -0.08
SF3A1-209ENST00000496189 BNIP2Q12982 314 aa14.56□□□□□ -0.08
SF3A1-209ENST00000496189 DAZAP2Q15038 168 aaPredicted RBP14.56□□□□□ -0.08
SF3A1-209ENST00000496189 DNAL1Q4LDG9 190 aa14.56□□□□□ -0.08
SF3A1-209ENST00000496189 SWT1Q5T5J6 900 aaKnown RBP14.56□□□□□ -0.08
SF3A1-209ENST00000496189 TMEM225Q6GV28 225 aa14.56□□□□□ -0.08
SF3A1-209ENST00000496189 GLYATQ6IB77 296 aa14.56□□□□□ -0.08
SF3A1-209ENST00000496189 TFAP2EQ6VUC0 442 aa14.56□□□□□ -0.08
SF3A1-209ENST00000496189 RINLQ6ZS11 566 aa14.56□□□□□ -0.08
SF3A1-209ENST00000496189 UBE2J2Q8N2K1 259 aa14.56□□□□□ -0.08
SF3A1-209ENST00000496189 STEAP2Q8NFT2 490 aa14.56□□□□□ -0.08
SF3A1-209ENST00000496189 VANGL1Q8TAA9 524 aaPredicted RBP14.56□□□□□ -0.08
SF3A1-209ENST00000496189 SLC38A4Q969I6 547 aa14.56□□□□□ -0.08
SF3A1-209ENST00000496189 MCHR1Q99705 422 aa14.56□□□□□ -0.08
SF3A1-209ENST00000496189 RSPO3Q9BXY4 272 aaPredicted RBP14.56□□□□□ -0.08
SF3A1-209ENST00000496189 GMPR2Q9P2T1 348 aaKnown RBP14.56□□□□□ -0.08
SF3A1-209ENST00000496189 EGFL7Q9UHF1 273 aa14.56□□□□□ -0.08
SF3A1-209ENST00000496189 PRPF19Q9UMS4 504 aaKnown RBP14.56□□□□□ -0.08
SF3A1-209ENST00000496189 GPR52Q9Y2T5 361 aa14.56□□□□□ -0.08
SF3A1-209ENST00000496189 IGKV3D-15A0A087WSY6 115 aa14.55□□□□□ -0.08
SF3A1-209ENST00000496189 ZC3H12DA2A288 527 aaKnown RBP14.55□□□□□ -0.08
SF3A1-209ENST00000496189 LIPT2A6NK58 231 aa14.55□□□□□ -0.08
SF3A1-209ENST00000496189 GYG2O15488 501 aa14.55□□□□□ -0.08
SF3A1-209ENST00000496189 MRPL33O75394 65 aaKnown RBP14.55□□□□□ -0.08
SF3A1-209ENST00000496189 ATP5HO75947 161 aa14.55□□□□□ -0.08
SF3A1-209ENST00000496189 VAMP5O95183 116 aa14.55□□□□□ -0.08
SF3A1-209ENST00000496189 SERPINA1P01009 418 aa14.55□□□□□ -0.08
SF3A1-209ENST00000496189 IMPDH2P12268 514 aa14.55□□□□□ -0.08
SF3A1-209ENST00000496189 IL32P24001 234 aa14.55□□□□□ -0.08
SF3A1-209ENST00000496189 IFNA8P32881 189 aa14.55□□□□□ -0.08
SF3A1-209ENST00000496189 OR3A2P47893 321 aa14.55□□□□□ -0.08
SF3A1-209ENST00000496189 RASSF2P50749 326 aa14.55□□□□□ -0.08
SF3A1-209ENST00000496189 CRYBA2P53672 197 aa14.55□□□□□ -0.08
SF3A1-209ENST00000496189 MFSD13AQ14CX5 517 aa14.55□□□□□ -0.08
SF3A1-209ENST00000496189 P2RY6Q15077 328 aa14.55□□□□□ -0.08
SF3A1-209ENST00000496189 OR1Q1Q15612 314 aa14.55□□□□□ -0.08
SF3A1-209ENST00000496189 ZNF613Q6PF04 617 aa14.55□□□□□ -0.08
SF3A1-209ENST00000496189 C6orf89Q6UWU4 347 aa14.55□□□□□ -0.08
SF3A1-209ENST00000496189 CBLL1Q75N03 491 aa14.55□□□□□ -0.08
SF3A1-209ENST00000496189 NUFIP2Q7Z417 695 aaKnown RBP14.55□□□□□ -0.08
SF3A1-209ENST00000496189 COMTD1Q86VU5 262 aa14.55□□□□□ -0.08
SF3A1-209ENST00000496189 CARM1Q86X55 608 aa14.55□□□□□ -0.08
SF3A1-209ENST00000496189 OR6T1Q8NGN1 323 aa14.55□□□□□ -0.08
SF3A1-209ENST00000496189 APH1AQ96BI3 265 aa14.55□□□□□ -0.08
SF3A1-209ENST00000496189 ZNF300Q96RE9 604 aaPredicted RBP14.55□□□□□ -0.08
SF3A1-209ENST00000496189 USB1Q9BQ65 265 aaKnown RBP14.55□□□□□ -0.08
SF3A1-209ENST00000496189 POLR2J2Q9GZM3 115 aaKnown RBP14.55□□□□□ -0.08
SF3A1-209ENST00000496189 POLR2J3Q9H1A7 115 aaKnown RBP14.55□□□□□ -0.08
SF3A1-209ENST00000496189 OR10A4Q9H209 315 aa14.55□□□□□ -0.08
SF3A1-209ENST00000496189 CLEC4MQ9H2X3 399 aaPredicted RBP14.55□□□□□ -0.08
SF3A1-209ENST00000496189 GORASP2Q9H8Y8 452 aa14.55□□□□□ -0.08
SF3A1-209ENST00000496189 CD300AQ9UGN4 299 aa14.55□□□□□ -0.08
SF3A1-209ENST00000496189 SAMD4AQ9UPU9 718 aaKnown RBP14.55□□□□□ -0.08
SF3A1-209ENST00000496189 SNX13Q9Y5W8 968 aa14.55□□□□□ -0.08
SF3A1-209ENST00000496189 ANKHD1Q8IWZ3 2542 aaKnown RBP14.54□□□□□ -0.08
SF3A1-209ENST00000496189 TMEM229AB2RXF0 380 aa14.54□□□□□ -0.08
SF3A1-209ENST00000496189 CTAG2O75638 210 aa14.54□□□□□ -0.08
SF3A1-209ENST00000496189 AKR7A3O95154 331 aa14.54□□□□□ -0.08
SF3A1-209ENST00000496189 CNOT4O95628 575 aaKnown RBP14.54□□□□□ -0.08
SF3A1-209ENST00000496189 STAMBPO95630 424 aa14.54□□□□□ -0.08
SF3A1-209ENST00000496189 NCK1P16333 377 aa14.54□□□□□ -0.08
SF3A1-209ENST00000496189 HTR2AP28223 471 aa14.54□□□□□ -0.08
SF3A1-209ENST00000496189 RPS5P46782 204 aaKnown RBP14.54□□□□□ -0.08
SF3A1-209ENST00000496189 SLC16A1P53985 500 aa14.54□□□□□ -0.08
SF3A1-209ENST00000496189 CASP12Q6UXS9 341 aa14.54□□□□□ -0.08
SF3A1-209ENST00000496189 STAC2Q6ZMT1 411 aa14.54□□□□□ -0.08
SF3A1-209ENST00000496189 FKBP9P1Q75LS8 142 aa14.54□□□□□ -0.08
SF3A1-209ENST00000496189 GPAT4Q86UL3 456 aa14.54□□□□□ -0.08
SF3A1-209ENST00000496189 CCDC103Q8IW40 242 aa14.54□□□□□ -0.08
SF3A1-209ENST00000496189 MFSD8Q8NHS3 518 aa14.54□□□□□ -0.08
SF3A1-209ENST00000496189 KISS1RQ969F8 398 aaPredicted RBP14.54□□□□□ -0.08
SF3A1-209ENST00000496189 ZNF775Q96BV0 537 aaPredicted RBP14.54□□□□□ -0.08
SF3A1-209ENST00000496189 SLC25A36Q96CQ1 311 aa14.54□□□□□ -0.08
SF3A1-209ENST00000496189 SF3B5Q9BWJ5 86 aaKnown RBP14.54□□□□□ -0.08
SF3A1-209ENST00000496189 PCDHAC1Q9H158 963 aa14.54□□□□□ -0.08
SF3A1-209ENST00000496189 MUC13Q9H3R2 512 aa14.54□□□□□ -0.08
SF3A1-209ENST00000496189 RASSF1Q9NS23 344 aa14.54□□□□□ -0.08
SF3A1-209ENST00000496189 TAS2R1Q9NYW7 299 aa14.54□□□□□ -0.08
SF3A1-209ENST00000496189 TESMINQ9Y4I5 508 aa14.54□□□□□ -0.08
SF3A1-209ENST00000496189 MAST4O15021 2626 aa14.53□□□□□ -0.08
SF3A1-209ENST00000496189 NOTCH2Q04721 2471 aa14.53□□□□□ -0.08
SF3A1-209ENST00000496189 TRAV36DV7A0A075B6V5 113 aa14.53□□□□□ -0.08
SF3A1-209ENST00000496189 A0A0B4J2E0 115 aa14.53□□□□□ -0.08
SF3A1-209ENST00000496189 A0A1B0GX12 115 aa14.53□□□□□ -0.08
SF3A1-209ENST00000496189 TRAPPC13A5PLN9 417 aa14.53□□□□□ -0.08
SF3A1-209ENST00000496189 AQP7P3A6NL99 342 aa14.53□□□□□ -0.08
SF3A1-209ENST00000496189 CPSF4LA6NMK7 179 aaKnown RBP14.53□□□□□ -0.08
SF3A1-209ENST00000496189 ZNF716A6NP11 495 aa14.53□□□□□ -0.08
SF3A1-209ENST00000496189 IFNW1P05000 195 aa14.53□□□□□ -0.08
SF3A1-209ENST00000496189 PSMB1P20618 241 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms