RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 EGFL7Q9UHF1 273 aa10.36□□□□□ -0.75
UBA3-211ENST00000493957 PROCRQ9UNN8 238 aa10.36□□□□□ -0.75
UBA3-211ENST00000493957 SH3GLB1Q9Y371 365 aa10.36□□□□□ -0.75
UBA3-211ENST00000493957 EMC9Q9Y3B6 208 aa10.36□□□□□ -0.75
UBA3-211ENST00000493957 NOTCH2Q04721 2471 aa10.35□□□□□ -0.75
UBA3-211ENST00000493957 FTCDNL1E5RQL4 147 aa10.35□□□□□ -0.75
UBA3-211ENST00000493957 NDUFAB1O14561 156 aa10.35□□□□□ -0.75
UBA3-211ENST00000493957 GSTA4O15217 222 aa10.35□□□□□ -0.75
UBA3-211ENST00000493957 HNRNPRO43390 633 aaKnown RBP10.35□□□□□ -0.75
UBA3-211ENST00000493957 T-ENOLP0DO92 83 aa10.35□□□□□ -0.75
UBA3-211ENST00000493957 CD8BP10966 210 aa10.35□□□□□ -0.75
UBA3-211ENST00000493957 TCN1P20061 433 aaPredicted RBP10.35□□□□□ -0.75
UBA3-211ENST00000493957 MSX2P35548 267 aaPredicted RBP10.35□□□□□ -0.75
UBA3-211ENST00000493957 RPS5P46782 204 aaKnown RBP10.35□□□□□ -0.75
UBA3-211ENST00000493957 P2RY4P51582 365 aa10.35□□□□□ -0.75
UBA3-211ENST00000493957 SLC35A1P78382 337 aa10.35□□□□□ -0.75
UBA3-211ENST00000493957 H3F3AP84243 136 aa10.35□□□□□ -0.75
UBA3-211ENST00000493957 KRT72Q14CN4 511 aa10.35□□□□□ -0.75
UBA3-211ENST00000493957 RNPS1Q15287 305 aaKnown RBP10.35□□□□□ -0.75
UBA3-211ENST00000493957 ULK3Q6PHR2 472 aa10.35□□□□□ -0.75
UBA3-211ENST00000493957 TFAP2EQ6VUC0 442 aa10.35□□□□□ -0.75
UBA3-211ENST00000493957 PGAM4Q8N0Y7 254 aa10.35□□□□□ -0.75
UBA3-211ENST00000493957 SLC43A2Q8N370 569 aa10.35□□□□□ -0.75
UBA3-211ENST00000493957 LINC01560Q8TB33 94 aa10.35□□□□□ -0.75
UBA3-211ENST00000493957 BCAS4Q8TDM0 211 aa10.35□□□□□ -0.75
UBA3-211ENST00000493957 STK35Q8TDR2 534 aa10.35□□□□□ -0.75
UBA3-211ENST00000493957 PROX1Q92786 737 aa10.35□□□□□ -0.75
UBA3-211ENST00000493957 SLC38A4Q969I6 547 aa10.35□□□□□ -0.75
UBA3-211ENST00000493957 TAAR8Q969N4 342 aa10.35□□□□□ -0.75
UBA3-211ENST00000493957 BCO1Q9HAY6 547 aa10.35□□□□□ -0.75
UBA3-211ENST00000493957 TMEM27Q9HBJ8 222 aa10.35□□□□□ -0.75
UBA3-211ENST00000493957 SPAG4Q9NPE6 437 aa10.35□□□□□ -0.75
UBA3-211ENST00000493957 PLSCR4Q9NRQ2 329 aa10.35□□□□□ -0.75
UBA3-211ENST00000493957 GLRX2Q9NS18 164 aa10.35□□□□□ -0.75
UBA3-211ENST00000493957 ADPRHL2Q9NX46 363 aa10.35□□□□□ -0.75
UBA3-211ENST00000493957 CRIM1Q9NZV1 1036 aa10.35□□□□□ -0.75
UBA3-211ENST00000493957 PRSS50Q9UI38 385 aa10.35□□□□□ -0.75
UBA3-211ENST00000493957 TRAPPC4Q9Y296 219 aa10.35□□□□□ -0.75
UBA3-211ENST00000493957 SNX13Q9Y5W8 968 aa10.35□□□□□ -0.75
UBA3-211ENST00000493957 TACC2O95359 2948 aa10.35□□□□□ -0.75
UBA3-211ENST00000493957 CADP27708 2225 aa10.34□□□□□ -0.75
UBA3-211ENST00000493957 SPG11Q96JI7 2443 aa10.34□□□□□ -0.75
UBA3-211ENST00000493957 A0A087WUJ7 227 aa10.34□□□□□ -0.75
UBA3-211ENST00000493957 LRRN3E7EW58 273 aa10.34□□□□□ -0.75
UBA3-211ENST00000493957 FMO6PO60774 539 aa10.34□□□□□ -0.75
UBA3-211ENST00000493957 AHSA1O95433 338 aa10.34□□□□□ -0.75
UBA3-211ENST00000493957 ZNF682O95780 498 aa10.34□□□□□ -0.75
UBA3-211ENST00000493957 SERPINA1P01009 418 aa10.34□□□□□ -0.75
UBA3-211ENST00000493957 GPIP06744 558 aa10.34□□□□□ -0.75
UBA3-211ENST00000493957 YES1P07947 543 aa10.34□□□□□ -0.75
UBA3-211ENST00000493957 GGT1P19440 569 aa10.34□□□□□ -0.75
UBA3-211ENST00000493957 FKBP2P26885 142 aaKnown RBP10.34□□□□□ -0.75
UBA3-211ENST00000493957 KRTAP10-9P60411 292 aa10.34□□□□□ -0.75
UBA3-211ENST00000493957 SELENOWP63302 87 aa10.34□□□□□ -0.75
UBA3-211ENST00000493957 MXRA7P84157 204 aa10.34□□□□□ -0.75
UBA3-211ENST00000493957 LTBQ06643 244 aa10.34□□□□□ -0.75
UBA3-211ENST00000493957 FOXD4Q12950 439 aaPredicted RBP10.34□□□□□ -0.75
UBA3-211ENST00000493957 TSC22D1Q15714 1073 aa10.34□□□□□ -0.75
UBA3-211ENST00000493957 TMEM201Q5SNT2 666 aa10.34□□□□□ -0.75
UBA3-211ENST00000493957 OTUD3Q5T2D3 398 aaPredicted RBP10.34□□□□□ -0.75
UBA3-211ENST00000493957 DEF8Q6ZN54 512 aa10.34□□□□□ -0.75
UBA3-211ENST00000493957 RINLQ6ZS11 566 aa10.34□□□□□ -0.75
UBA3-211ENST00000493957 C22orf34Q6ZV56 151 aa10.34□□□□□ -0.75
UBA3-211ENST00000493957 GDF7Q7Z4P5 450 aa10.34□□□□□ -0.75
UBA3-211ENST00000493957 DEFB107AQ8IZN7 70 aa10.34□□□□□ -0.75
UBA3-211ENST00000493957 FAM86B1Q8N7N1 296 aa10.34□□□□□ -0.75
UBA3-211ENST00000493957 ADAMTS16Q8TE57 1224 aa10.34□□□□□ -0.75
UBA3-211ENST00000493957 DNAJA4Q8WW22 397 aaPredicted RBP10.34□□□□□ -0.75
UBA3-211ENST00000493957 SLC25A36Q96CQ1 311 aa10.34□□□□□ -0.75
UBA3-211ENST00000493957 SLC47A1Q96FL8 570 aa10.34□□□□□ -0.75
UBA3-211ENST00000493957 NSL1Q96IY1 281 aa10.34□□□□□ -0.75
UBA3-211ENST00000493957 CDRT15Q96T59 188 aa10.34□□□□□ -0.75
UBA3-211ENST00000493957 PCDHAC1Q9H158 963 aa10.34□□□□□ -0.75
UBA3-211ENST00000493957 C12orf10Q9HB07 376 aa10.34□□□□□ -0.75
UBA3-211ENST00000493957 KLHL9Q9P2J3 617 aa10.34□□□□□ -0.75
UBA3-211ENST00000493957 BAG5Q9UL15 447 aa10.34□□□□□ -0.75
UBA3-211ENST00000493957 SLC7A7Q9UM01 511 aa10.34□□□□□ -0.75
UBA3-211ENST00000493957 AP3M1Q9Y2T2 418 aa10.34□□□□□ -0.75
UBA3-211ENST00000493957 HEATR1Q9H583 2144 aaKnown RBP10.34□□□□□ -0.75
UBA3-211ENST00000493957 ROS1P08922 2347 aa10.34□□□□□ -0.75
UBA3-211ENST00000493957 ANKRD17O75179 2603 aaKnown RBP10.34□□□□□ -0.75
UBA3-211ENST00000493957 LRBAP50851 2863 aa10.33□□□□□ -0.76
UBA3-211ENST00000493957 MAST4O15021 2626 aa10.33□□□□□ -0.76
UBA3-211ENST00000493957 IGKV3D-15A0A087WSY6 115 aa10.33□□□□□ -0.76
UBA3-211ENST00000493957 TRAPPC13A5PLN9 417 aa10.33□□□□□ -0.76
UBA3-211ENST00000493957 AQP7P3A6NL99 342 aa10.33□□□□□ -0.76
UBA3-211ENST00000493957 B2RBV5 119 aa10.33□□□□□ -0.76
UBA3-211ENST00000493957 J3KTA2 159 aa10.33□□□□□ -0.76
UBA3-211ENST00000493957 DNPH1O43598 174 aa10.33□□□□□ -0.76
UBA3-211ENST00000493957 CHP2O43745 196 aa10.33□□□□□ -0.76
UBA3-211ENST00000493957 IFNA14P01570 189 aa10.33□□□□□ -0.76
UBA3-211ENST00000493957 IGHV3-9P01782 118 aa10.33□□□□□ -0.76
UBA3-211ENST00000493957 BGLAPP02818 100 aa10.33□□□□□ -0.76
UBA3-211ENST00000493957 PNMTP11086 282 aa10.33□□□□□ -0.76
UBA3-211ENST00000493957 POU2F1P14859 743 aa10.33□□□□□ -0.76
UBA3-211ENST00000493957 CD79BP40259 229 aa10.33□□□□□ -0.76
UBA3-211ENST00000493957 YAP1P46937 504 aaKnown RBP10.33□□□□□ -0.76
UBA3-211ENST00000493957 MAP2K6P52564 334 aa10.33□□□□□ -0.76
UBA3-211ENST00000493957 PIN1Q13526 163 aaPredicted RBP10.33□□□□□ -0.76
UBA3-211ENST00000493957 EEF1A1P5Q5VTE0 462 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms