RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 GABARAPO95166 117 aa18.73■□□□□ 0.59
RNF40-203ENST00000493683 C1SP09871 688 aa18.73■□□□□ 0.59
RNF40-203ENST00000493683 ETV5P41161 510 aa18.73■□□□□ 0.59
RNF40-203ENST00000493683 YPEL5P62699 121 aa18.73■□□□□ 0.59
RNF40-203ENST00000493683 POU3F1Q03052 451 aaPredicted RBP18.73■□□□□ 0.59
RNF40-203ENST00000493683 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.73■□□□□ 0.592e-7■■■■□ 24
RNF40-203ENST00000493683 MOB3CQ70IA8 216 aa18.73■□□□□ 0.59
RNF40-203ENST00000493683 FRMD1Q8N878 549 aa18.73■□□□□ 0.59
RNF40-203ENST00000493683 OR52N1Q8NH53 320 aa18.73■□□□□ 0.59
RNF40-203ENST00000493683 SLAMF9Q96A28 289 aa18.73■□□□□ 0.59
RNF40-203ENST00000493683 SLC39A13Q96H72 371 aa18.73■□□□□ 0.59
RNF40-203ENST00000493683 ZNF142P52746 1687 aaPredicted RBP18.73■□□□□ 0.59
RNF40-203ENST00000493683 PDLIM3Q53GG5 364 aaPredicted RBP18.73■□□□□ 0.59
RNF40-203ENST00000493683 OR2G6Q5TZ20 316 aa18.73■□□□□ 0.59
RNF40-203ENST00000493683 SFXN4Q6P4A7 337 aa18.73■□□□□ 0.59
RNF40-203ENST00000493683 IDO2Q6ZQW0 420 aa18.73■□□□□ 0.59
RNF40-203ENST00000493683 ZNF534Q76KX8 674 aa18.73■□□□□ 0.59
RNF40-203ENST00000493683 HAO2Q9NYQ3 351 aa18.73■□□□□ 0.59
RNF40-203ENST00000493683 IL2RGP31785 369 aa18.73■□□□□ 0.59
RNF40-203ENST00000493683 WDR5BQ86VZ2 330 aa18.73■□□□□ 0.59
RNF40-203ENST00000493683 NKX3-1Q99801 234 aaPredicted RBP18.73■□□□□ 0.59
RNF40-203ENST00000493683 TMEM38AQ9H6F2 299 aa18.73■□□□□ 0.59
RNF40-203ENST00000493683 ACAD8Q9UKU7 415 aa18.73■□□□□ 0.59
RNF40-203ENST00000493683 BOKQ9UMX3 212 aaPredicted RBP18.73■□□□□ 0.59
RNF40-203ENST00000493683 A0A0U1RQK1 487 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 AP1G1O43747 822 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 HOXB5P09067 269 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 IL32P24001 234 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 SSTR2P30874 369 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 HBG1P69891 147 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 HBG2P69892 147 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 COX15Q7KZN9 410 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 TMEM59Q9BXS4 323 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 TPSD1Q9BZJ3 242 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 SMIM3Q9BZL3 60 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 WDR76Q9H967 626 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 ZNF225Q9UK10 706 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 OR6C65A6NJZ3 312 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 CNMDO75829 334 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 GLSO94925 669 aaPredicted RBP18.72■□□□□ 0.59
RNF40-203ENST00000493683 ITGB2P05107 769 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 TRAPPC2P0DI81 140 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 TRAPPC2BP0DI82 140 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 YIF1BQ5BJH7 314 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 DUSP19Q8WTR2 217 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 EPHX3Q9H6B9 360 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 ACKR4Q9NPB9 350 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 NOX4Q9NPH5 578 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 TRDV1A0A1B0GX56 115 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 SDC3O75056 442 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 RPS18P62269 152 aaKnown RBP18.72■□□□□ 0.59
RNF40-203ENST00000493683 SYT6Q5T7P8 510 aaPredicted RBP18.72■□□□□ 0.59
RNF40-203ENST00000493683 LSMEM2Q8N112 164 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 OR13C2Q8NGS9 318 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 SLC38A5Q8WUX1 472 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 RNF141Q8WVD5 230 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 ZBED3Q96IU2 234 aaPredicted RBP18.72■□□□□ 0.59
RNF40-203ENST00000493683 OR7A17O14581 309 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 OLFM2O95897 454 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 FOSL1P15407 271 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 RPE65Q16518 533 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 SMN1Q16637 294 aaKnown RBP18.72■□□□□ 0.59
RNF40-203ENST00000493683 SLC35D3Q5M8T2 416 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 ZNF684Q5T5D7 378 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 NKAIN3Q8N8D7 197 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 ALG12Q9BV10 488 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 COQ3Q9NZJ6 369 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 CD207Q9UJ71 328 aa18.72■□□□□ 0.59
RNF40-203ENST00000493683 PTRH2Q9Y3E5 179 aaKnown RBP18.72■□□□□ 0.59
RNF40-203ENST00000493683 J3KTA2 159 aa18.71■□□□□ 0.59
RNF40-203ENST00000493683 ICAM2P13598 275 aa18.71■□□□□ 0.59
RNF40-203ENST00000493683 FPR3P25089 353 aa18.71■□□□□ 0.59
RNF40-203ENST00000493683 VASPP50552 380 aaPredicted RBP18.71■□□□□ 0.59
RNF40-203ENST00000493683 UBE2KP61086 200 aa18.71■□□□□ 0.59
RNF40-203ENST00000493683 RPS25P62851 125 aaKnown RBP18.71■□□□□ 0.59
RNF40-203ENST00000493683 MBTPS1Q14703 1052 aa18.71■□□□□ 0.59
RNF40-203ENST00000493683 C17orf99Q6UX52 265 aa18.71■□□□□ 0.59
RNF40-203ENST00000493683 RETREG3Q86VR2 466 aa18.71■□□□□ 0.59
RNF40-203ENST00000493683 RAB3CQ96E17 227 aa18.71■□□□□ 0.59
RNF40-203ENST00000493683 SDSLQ96GA7 329 aa18.71■□□□□ 0.59
RNF40-203ENST00000493683 GM2AP17900 193 aa18.71■□□□□ 0.59
RNF40-203ENST00000493683 REEP5Q00765 189 aa18.71■□□□□ 0.59
RNF40-203ENST00000493683 ACSM1Q08AH1 577 aa18.71■□□□□ 0.59
RNF40-203ENST00000493683 CREB3L2Q70SY1 520 aa18.71■□□□□ 0.59
RNF40-203ENST00000493683 NEURL3Q96EH8 262 aa18.71■□□□□ 0.59
RNF40-203ENST00000493683 GFOD1Q9NXC2 390 aa18.71■□□□□ 0.59
RNF40-203ENST00000493683 AQP9O43315 295 aa18.71■□□□□ 0.59
RNF40-203ENST00000493683 FADS1O60427 444 aa18.71■□□□□ 0.59
RNF40-203ENST00000493683 CHRNEQ04844 493 aa18.71■□□□□ 0.59
RNF40-203ENST00000493683 DPY19L2P2Q6ZN68 376 aa18.71■□□□□ 0.59
RNF40-203ENST00000493683 SLC6A18Q96N87 628 aa18.71■□□□□ 0.59
RNF40-203ENST00000493683 OSGIN1Q9UJX0 560 aa18.71■□□□□ 0.59
RNF40-203ENST00000493683 MYH11P35749 1972 aa18.71■□□□□ 0.59
RNF40-203ENST00000493683 TRBV11-1A0A0K0K1C0 115 aa18.71■□□□□ 0.59
RNF40-203ENST00000493683 AGAP14A8MT82 685 aa18.71■□□□□ 0.59
RNF40-203ENST00000493683 OIP5O43482 229 aa18.71■□□□□ 0.59
RNF40-203ENST00000493683 FURINP09958 794 aa18.71■□□□□ 0.59
RNF40-203ENST00000493683 GDF1P27539 372 aa18.71■□□□□ 0.59
RNF40-203ENST00000493683 CTBSQ01459 385 aa18.71■□□□□ 0.59
RNF40-203ENST00000493683 SLC51BQ86UW2 128 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms