RNA–Protein interactions for RNA: ENST00000490839.1

AGAP3-222, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-222	ENST00000490839	CNOT9	Q92600	299 aa	Known RBP	13.24	□□□□□ -0.29
AGAP3-222	ENST00000490839	AURKB	Q96GD4	344 aa	Predicted RBP	13.24	□□□□□ -0.29
AGAP3-222	ENST00000490839	ZNF385A	Q96PM9	386 aa	Known RBP	13.24	□□□□□ -0.29
AGAP3-222	ENST00000490839	ZC3H12D	A2A288	527 aa	Known RBP	13.23	□□□□□ -0.29
AGAP3-222	ENST00000490839	OR6C65	A6NJZ3	312 aa		13.23	□□□□□ -0.29
AGAP3-222	ENST00000490839	LIPT2	A6NK58	231 aa		13.23	□□□□□ -0.29
AGAP3-222	ENST00000490839	AQP7P3	A6NL99	342 aa		13.23	□□□□□ -0.29
AGAP3-222	ENST00000490839	CLDN24	A6NM45	220 aa		13.23	□□□□□ -0.29
AGAP3-222	ENST00000490839	VSTM5	A8MXK1	200 aa		13.23	□□□□□ -0.29
AGAP3-222	ENST00000490839	hCG_2039718	K7EN88	272 aa		13.23	□□□□□ -0.29
AGAP3-222	ENST00000490839	FAAH	O00519	579 aa		13.23	□□□□□ -0.29
AGAP3-222	ENST00000490839	AP3D1	O14617	1153 aa		13.23	□□□□□ -0.29
AGAP3-222	ENST00000490839	VENTX	O95231	258 aa		13.23	□□□□□ -0.29
AGAP3-222	ENST00000490839	IGLV1-44	P01699	117 aa		13.23	□□□□□ -0.29
AGAP3-222	ENST00000490839	GPI	P06744	558 aa		13.23	□□□□□ -0.29
AGAP3-222	ENST00000490839	TACR3	P29371	465 aa		13.23	□□□□□ -0.29
AGAP3-222	ENST00000490839	CALCR	P30988	508 aa		13.23	□□□□□ -0.29
AGAP3-222	ENST00000490839	KHK	P50053	298 aa		13.23	□□□□□ -0.29
AGAP3-222	ENST00000490839	MAD2L1	Q13257	205 aa	Predicted RBP	13.23	□□□□□ -0.29
AGAP3-222	ENST00000490839	DEF8	Q6ZN54	512 aa		13.23	□□□□□ -0.29
AGAP3-222	ENST00000490839	HMGN2P46	Q86SG4	172 aa		13.23	□□□□□ -0.29
AGAP3-222	ENST00000490839	TMEM99	Q8N816	258 aa		13.23	□□□□□ -0.29
AGAP3-222	ENST00000490839	MAGEE2	Q8TD90	523 aa	Predicted RBP	13.23	□□□□□ -0.29
AGAP3-222	ENST00000490839	BCL2L2	Q92843	193 aa	Predicted RBP	13.23	□□□□□ -0.29
AGAP3-222	ENST00000490839	RAB8B	Q92930	207 aa		13.23	□□□□□ -0.29
AGAP3-222	ENST00000490839	TUBGCP3	Q96CW5	907 aa		13.23	□□□□□ -0.29
AGAP3-222	ENST00000490839	ZG16B	Q96DA0	208 aa		13.23	□□□□□ -0.29
AGAP3-222	ENST00000490839	ALKBH3	Q96Q83	286 aa	Predicted RBP	13.23	□□□□□ -0.29
AGAP3-222	ENST00000490839	OCEL1	Q9H607	264 aa		13.23	□□□□□ -0.29
AGAP3-222	ENST00000490839	MKS1	Q9NXB0	559 aa		13.23	□□□□□ -0.29
AGAP3-222	ENST00000490839	ASIC5	Q9NY37	505 aa		13.23	□□□□□ -0.29
AGAP3-222	ENST00000490839	SMIM23	A6NLE4	172 aa		13.22	□□□□□ -0.29
AGAP3-222	ENST00000490839	SKAP2	O75563	359 aa	Predicted RBP	13.22	□□□□□ -0.29
AGAP3-222	ENST00000490839	AKR7A3	O95154	331 aa		13.22	□□□□□ -0.29
AGAP3-222	ENST00000490839	SHBG	P04278	402 aa		13.22	□□□□□ -0.29
AGAP3-222	ENST00000490839	UQCRB	P14927	111 aa		13.22	□□□□□ -0.29
AGAP3-222	ENST00000490839	IFNGR1	P15260	489 aa		13.22	□□□□□ -0.29
AGAP3-222	ENST00000490839	NPR2	P20594	1047 aa		13.22	□□□□□ -0.29
AGAP3-222	ENST00000490839	UQCRC2	P22695	453 aa		13.22	□□□□□ -0.29
AGAP3-222	ENST00000490839	ALDH3A1	P30838	453 aa		13.22	□□□□□ -0.29
AGAP3-222	ENST00000490839	SERPINB5	P36952	375 aa		13.22	□□□□□ -0.29
AGAP3-222	ENST00000490839	COMP	P49747	757 aa	Predicted RBP	13.22	□□□□□ -0.29
AGAP3-222	ENST00000490839	ACTG1	P63261	375 aa		13.22	□□□□□ -0.29
AGAP3-222	ENST00000490839	HGFAC	Q04756	655 aa		13.22	□□□□□ -0.29
AGAP3-222	ENST00000490839	SCGB2A2	Q13296	93 aa		13.22	□□□□□ -0.29
AGAP3-222	ENST00000490839	RIN1	Q13671	783 aa		13.22	□□□□□ -0.29
AGAP3-222	ENST00000490839	CEACAM7	Q14002	265 aa		13.22	□□□□□ -0.29
AGAP3-222	ENST00000490839	OR7A5	Q15622	319 aa		13.22	□□□□□ -0.29
AGAP3-222	ENST00000490839	FAM174B	Q3ZCQ3	159 aa		13.22	□□□□□ -0.29
AGAP3-222	ENST00000490839	GPAT3	Q53EU6	434 aa		13.22	□□□□□ -0.29
AGAP3-222	ENST00000490839	SAXO2	Q658L1	398 aa		13.22	□□□□□ -0.29
AGAP3-222	ENST00000490839	GPAT4	Q86UL3	456 aa		13.22	□□□□□ -0.29
AGAP3-222	ENST00000490839	GLCCI1	Q86VQ1	547 aa		13.22	□□□□□ -0.29
AGAP3-222	ENST00000490839	SVOPL	Q8N434	492 aa		13.22	□□□□□ -0.29
AGAP3-222	ENST00000490839	OR8J2	Q8NGG1	315 aa		13.22	□□□□□ -0.29
AGAP3-222	ENST00000490839	UBASH3B	Q8TF42	649 aa		13.22	□□□□□ -0.29
AGAP3-222	ENST00000490839	WDR60	Q8WVS4	1066 aa		13.22	□□□□□ -0.29
AGAP3-222	ENST00000490839	ANKRD27	Q96NW4	1050 aa		13.22	□□□□□ -0.29
AGAP3-222	ENST00000490839	DOK1	Q99704	481 aa		13.22	□□□□□ -0.29
AGAP3-222	ENST00000490839	SEC61A2	Q9H9S3	476 aa		13.22	□□□□□ -0.29
AGAP3-222	ENST00000490839	DYNLRB1	Q9NP97	96 aa		13.22	□□□□□ -0.29
AGAP3-222	ENST00000490839	NOP53	Q9NZM5	478 aa	Known RBP	13.22	□□□□□ -0.29
AGAP3-222	ENST00000490839	CFAP73	A6NFT4	308 aa		13.21	□□□□□ -0.29
AGAP3-222	ENST00000490839		B4DSR2	109 aa		13.21	□□□□□ -0.29
AGAP3-222	ENST00000490839	NR5A2	O00482	541 aa		13.21	□□□□□ -0.29
AGAP3-222	ENST00000490839	VAMP5	O95183	116 aa		13.21	□□□□□ -0.29
AGAP3-222	ENST00000490839	IGKV3-15	P01624	115 aa		13.21	□□□□□ -0.29
AGAP3-222	ENST00000490839	HOXB1	P14653	301 aa	Predicted RBP	13.21	□□□□□ -0.29
AGAP3-222	ENST00000490839	SELENOP	P49908	381 aa		13.21	□□□□□ -0.29
AGAP3-222	ENST00000490839	SH3BGR	P55822	239 aa	Predicted RBP	13.21	□□□□□ -0.29
AGAP3-222	ENST00000490839	TUBA1B	P68363	451 aa		13.21	□□□□□ -0.29
AGAP3-222	ENST00000490839	TUBA4A	P68366	448 aa		13.21	□□□□□ -0.29
AGAP3-222	ENST00000490839	EMX2	Q04743	252 aa		13.21	□□□□□ -0.29
AGAP3-222	ENST00000490839	TRIP10	Q15642	601 aa		13.21	□□□□□ -0.29
AGAP3-222	ENST00000490839	TUBA1A	Q71U36	451 aa		13.21	□□□□□ -0.29
AGAP3-222	ENST00000490839	SPATA21	Q7Z572	469 aa		13.21	□□□□□ -0.29
AGAP3-222	ENST00000490839	SGMS2	Q8NHU3	365 aa		13.21	□□□□□ -0.29
AGAP3-222	ENST00000490839	NEURL3	Q96EH8	262 aa		13.21	□□□□□ -0.29
AGAP3-222	ENST00000490839	APOPT1	Q96IL0	206 aa		13.21	□□□□□ -0.29
AGAP3-222	ENST00000490839	MECR	Q9BV79	373 aa		13.21	□□□□□ -0.29
AGAP3-222	ENST00000490839	NELFA	Q9H3P2	528 aa		13.21	□□□□□ -0.29
AGAP3-222	ENST00000490839	METTL17	Q9H7H0	456 aa	Predicted RBP	13.21	□□□□□ -0.29
AGAP3-222	ENST00000490839	PRAMEF27	A3QJZ7	478 aa		13.2	□□□□□ -0.3
AGAP3-222	ENST00000490839	AGAP5	A6NIR3	686 aa		13.2	□□□□□ -0.3
AGAP3-222	ENST00000490839	SCN2B	O60939	215 aa		13.2	□□□□□ -0.3
AGAP3-222	ENST00000490839	THBS4	P35443	961 aa		13.2	□□□□□ -0.3
AGAP3-222	ENST00000490839	P2RY4	P51582	365 aa		13.2	□□□□□ -0.3
AGAP3-222	ENST00000490839	POU3F1	Q03052	451 aa	Predicted RBP	13.2	□□□□□ -0.3
AGAP3-222	ENST00000490839	LGALS3BP	Q08380	585 aa		13.2	□□□□□ -0.3
AGAP3-222	ENST00000490839	EPS8	Q12929	822 aa		13.2	□□□□□ -0.3
AGAP3-222	ENST00000490839	CCNI	Q14094	377 aa		13.2	□□□□□ -0.3
AGAP3-222	ENST00000490839	GNA13	Q14344	377 aa		13.2	□□□□□ -0.3
AGAP3-222	ENST00000490839	ADRM1	Q16186	407 aa		13.2	□□□□□ -0.3
AGAP3-222	ENST00000490839	GSTA3	Q16772	222 aa		13.2	□□□□□ -0.3
AGAP3-222	ENST00000490839	SMU1	Q2TAY7	513 aa		13.2	□□□□□ -0.3
AGAP3-222	ENST00000490839	ANXA8L1	Q5VT79	327 aa		13.2	□□□□□ -0.3
AGAP3-222	ENST00000490839	TMEM225	Q6GV28	225 aa		13.2	□□□□□ -0.3
AGAP3-222	ENST00000490839	ZCCHC23	Q6ZST2	131 aa		13.2	□□□□□ -0.3
AGAP3-222	ENST00000490839	LINGO2	Q7L985	606 aa		13.2	□□□□□ -0.3
AGAP3-222	ENST00000490839	LSR	Q86X29	649 aa	Predicted RBP	13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms