RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 TRAM2Q15035 370 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 OR1Q1Q15612 314 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 CD226Q15762 336 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 NDUFAF6Q330K2 333 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 ZIK1Q3SY52 487 aaPredicted RBP6.84□□□□□ -1.31
CLDN1-202ENST00000490800 GXYLT1Q4G148 440 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 EMC4Q5J8M3 183 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 FGD3Q5JSP0 725 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 DCST1Q5T197 706 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 TMEM211Q6ICI0 200 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 ZNF770Q6IQ21 691 aaPredicted RBP6.84□□□□□ -1.31
CLDN1-202ENST00000490800 ARHGAP11AQ6P4F7 1023 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 PODNL1Q6PEZ8 512 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 ZNF550Q7Z398 422 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 GDF7Q7Z4P5 450 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 RANBP3LQ86VV4 465 aaPredicted RBP6.84□□□□□ -1.31
CLDN1-202ENST00000490800 GPALPP1Q8IXQ4 340 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 RPRMLQ8N4K4 120 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 MARVELD2Q8N4S9 558 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 ATG16L2Q8NAA4 619 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 GATSQ8NAP1 163 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 ZNF527Q8NB42 609 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 OR9Q2Q8NGE9 314 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 SLC7A13Q8TCU3 470 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 ADAMTS16Q8TE57 1224 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 RNF138Q8WVD3 245 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 TFAP2CQ92754 450 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 HGDQ93099 445 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 ARSGQ96EG1 525 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 SLC41A3Q96GZ6 507 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 LURAP1Q96LR2 239 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 RDH12Q96NR8 316 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 MBOAT4Q96T53 435 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 FEVQ99581 238 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 ZNF559Q9BR84 538 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 ADI1Q9BV57 179 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 TTTY12Q9BZ98 90 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 RTN4RQ9BZR6 473 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 UCK2Q9BZX2 261 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 POLR2J2Q9GZM3 115 aaKnown RBP6.84□□□□□ -1.31
CLDN1-202ENST00000490800 POLR2J3Q9H1A7 115 aaKnown RBP6.84□□□□□ -1.31
CLDN1-202ENST00000490800 TOR3AQ9H497 397 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 COQ3Q9NZJ6 369 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 TESQ9UGI8 421 aaKnown RBP6.84□□□□□ -1.31
CLDN1-202ENST00000490800 TMCC3Q9ULS5 477 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 SLC35A3Q9Y2D2 325 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 LRCH1Q9Y2L9 728 aa6.84□□□□□ -1.31
CLDN1-202ENST00000490800 CSMD2Q7Z408 3487 aa6.84□□□□□ -1.32
CLDN1-202ENST00000490800 PDZD2O15018 2839 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 ABCA12Q86UK0 2595 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 A0A087WUU8 490 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 LOC100996750A0A140TA64 210 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 A0A1B0GWA3 101 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 TRAPPC13A5PLN9 417 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 E9PQ18 207 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 GLSO94925 669 aaPredicted RBP6.83□□□□□ -1.32
CLDN1-202ENST00000490800 P04436 131 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 UBTFL6P0CB48 400 aaPredicted RBP6.83□□□□□ -1.32
CLDN1-202ENST00000490800 UBL4AP11441 157 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 ANXA8P13928 327 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 HPGDP15428 266 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 FSTP19883 344 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 POU3F2P20265 443 aaPredicted RBP6.83□□□□□ -1.32
CLDN1-202ENST00000490800 IGFBP5P24593 272 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 EVI2BP34910 448 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 CAPGP40121 348 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 DNASE1L1P49184 302 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 KRTAP10-9P60411 292 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 ADARB1P78563 741 aaKnown RBP6.83□□□□□ -1.32
CLDN1-202ENST00000490800 PMPCAQ10713 525 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 ST3GAL3Q11203 375 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 SKP2Q13309 424 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 RFX4Q33E94 735 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 SLC36A3Q495N2 470 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 PGBD2Q6P3X8 592 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 OPN5Q6U736 354 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 RTL4Q6ZR62 310 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 NUP54Q7Z3B4 507 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 GALNT5Q7Z7M9 940 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 MARCH3Q86UD3 253 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 SLC22A16Q86VW1 577 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 NKAIN4Q8IVV8 208 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 ZNF440Q8IYI8 595 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 DHRSXQ8N5I4 330 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 SLC15A4Q8N697 577 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 AQP11Q8NBQ7 271 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 OR5M9Q8NGP3 310 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 SLC22A8Q8TCC7 542 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 PHOSPHO1Q8TCT1 267 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 CYGBQ8WWM9 190 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 SGCZQ96LD1 299 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 NODALQ96S42 347 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 SPOCK3Q9BQ16 436 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 FAM173AQ9BQD7 235 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 PRSS27Q9BQR3 290 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 KRTAP4-6Q9BYQ5 205 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 TRIM2Q9C040 744 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 LAT2Q9GZY6 243 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 ENKD1Q9H0I2 346 aa6.83□□□□□ -1.32
CLDN1-202ENST00000490800 TP63Q9H3D4 680 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms