RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 PPP3CBP16298 524 aa8.09□□□□□ -1.11
SUPT20H-220ENST00000490716 NFYCQ13952 458 aa8.09□□□□□ -1.11
SUPT20H-220ENST00000490716 LARS2Q15031 903 aaKnown RBP8.09□□□□□ -1.11
SUPT20H-220ENST00000490716 PHYHD1Q5SRE7 291 aa8.09□□□□□ -1.11
SUPT20H-220ENST00000490716 ULK3Q6PHR2 472 aa8.09□□□□□ -1.11
SUPT20H-220ENST00000490716 PATL1Q86TB9 770 aaKnown RBP8.09□□□□□ -1.11
SUPT20H-220ENST00000490716 FAM169BQ8N8A8 192 aa8.09□□□□□ -1.11
SUPT20H-220ENST00000490716 SCAIQ8N9R8 606 aa8.09□□□□□ -1.11
SUPT20H-220ENST00000490716 C1orf162Q8NEQ5 155 aaPredicted RBP8.09□□□□□ -1.11
SUPT20H-220ENST00000490716 DNAJA4Q8WW22 397 aaPredicted RBP8.09□□□□□ -1.11
SUPT20H-220ENST00000490716 MOGAT1Q96PD6 335 aa8.09□□□□□ -1.11
SUPT20H-220ENST00000490716 GRIP2Q9C0E4 1043 aa8.09□□□□□ -1.11
SUPT20H-220ENST00000490716 ALKBH4Q9NXW9 302 aa8.09□□□□□ -1.11
SUPT20H-220ENST00000490716 GPR52Q9Y2T5 361 aa8.09□□□□□ -1.11
SUPT20H-220ENST00000490716 SLC25A15Q9Y619 301 aa8.09□□□□□ -1.11
SUPT20H-220ENST00000490716 IGLV1-44P01699 117 aa8.09□□□□□ -1.11
SUPT20H-220ENST00000490716 COX6B1P14854 86 aa8.09□□□□□ -1.11
SUPT20H-220ENST00000490716 CD53P19397 219 aa8.09□□□□□ -1.11
SUPT20H-220ENST00000490716 DNAJA1P31689 397 aaKnown RBP8.09□□□□□ -1.11
SUPT20H-220ENST00000490716 MAGEA2P43356 314 aa8.09□□□□□ -1.11
SUPT20H-220ENST00000490716 FXYD6P3P58550 94 aa8.09□□□□□ -1.11
SUPT20H-220ENST00000490716 ENTPD8Q5MY95 495 aa8.09□□□□□ -1.11
SUPT20H-220ENST00000490716 FOXL2NBQ6ZUU3 175 aa8.09□□□□□ -1.11
SUPT20H-220ENST00000490716 CCDC103Q8IW40 242 aa8.09□□□□□ -1.11
SUPT20H-220ENST00000490716 OR9K2Q8NGE7 335 aa8.09□□□□□ -1.11
SUPT20H-220ENST00000490716 DDIT4LQ96D03 193 aa8.09□□□□□ -1.11
SUPT20H-220ENST00000490716 ZNF385AQ96PM9 386 aaKnown RBP8.09□□□□□ -1.11
SUPT20H-220ENST00000490716 PIP5K1AQ99755 562 aa8.09□□□□□ -1.11
SUPT20H-220ENST00000490716 MRPL13Q9BYD1 178 aaKnown RBP8.09□□□□□ -1.11
SUPT20H-220ENST00000490716 EXO5Q9H790 373 aa8.09□□□□□ -1.11
SUPT20H-220ENST00000490716 ARL8BQ9NVJ2 186 aa8.09□□□□□ -1.11
SUPT20H-220ENST00000490716 SPTBN1Q01082 2364 aaKnown RBP8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 ZANQ9Y493 2812 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 CACNA1DQ01668 2161 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 ZNF503-AS2A6NEH8 195 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 CCT8L1PA6NM43 557 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 SEC14L5O43304 696 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 CCDC22O60826 627 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 KDELR2P33947 212 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 SFTPDP35247 375 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 RBM34P42696 430 aaKnown RBP8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 CSNK2A1P68400 391 aaPredicted RBP8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 SLC35A1P78382 337 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 GABRA6Q16445 453 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 ERICH5Q6P6B1 374 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 ARMC8Q8IUR7 673 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 UBQLNLQ8IYU4 475 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 MICU2Q8IYU8 434 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 TMEM54Q969K7 222 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 LRR1Q96L50 414 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 LIME1Q9H400 295 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 B3GNT2Q9NY97 397 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 MCTS1Q9ULC4 181 aaKnown RBP8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 ANKHD1Q8IWZ3 2542 aaKnown RBP8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 M0QX08 132 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 M0R3H8 397 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 PLPP3O14495 311 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 EIF1BO60739 113 aaKnown RBP8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 FAM107AO95990 144 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 PNMTP11086 282 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 HPGDP15428 266 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 KIR2DL3P43628 341 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 LSM11P83369 360 aaKnown RBP eCLIP8.08□□□□□ -1.122e-7■□□□□ 10.9
SUPT20H-220ENST00000490716 P2RY6Q15077 328 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 TOMM20Q15388 145 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 ZNF74Q16587 644 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 C11orf71Q6IPW1 123 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 BEND4Q6ZU67 534 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 PIGXQ8TBF5 258 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 HDHD5Q9BXW7 423 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 C1orf21Q9H246 121 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 DCAF13Q9NV06 445 aaKnown RBP8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 RCE1Q9Y256 329 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 PRR14LQ5THK1 2151 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 SHISA9B4DS77 424 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 ANGPT2O15123 496 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 IGFBP1P08833 259 aaPredicted RBP8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 SNTB1Q13884 538 aaKnown RBP8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 MAPRE2Q15555 327 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 NCMAPQ5T1S8 102 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 PAMR1Q6UXH9 720 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 POU5F2Q8N7G0 328 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 OR5B2Q96R09 309 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 TRIM2Q9C040 744 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 KLHL9Q9P2J3 617 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 AP3M1Q9Y2T2 418 aa8.08□□□□□ -1.12
SUPT20H-220ENST00000490716 ANP32DO95626 131 aa8.07□□□□□ -1.12
SUPT20H-220ENST00000490716 GCKP35557 465 aa8.07□□□□□ -1.12
SUPT20H-220ENST00000490716 GSK3BP49841 420 aa8.07□□□□□ -1.12
SUPT20H-220ENST00000490716 CDC20BQ86Y33 519 aa8.07□□□□□ -1.12
SUPT20H-220ENST00000490716 FAM86B1Q8N7N1 296 aa8.07□□□□□ -1.12
SUPT20H-220ENST00000490716 TMEM99Q8N816 258 aa8.07□□□□□ -1.12
SUPT20H-220ENST00000490716 LINC01560Q8TB33 94 aa8.07□□□□□ -1.12
SUPT20H-220ENST00000490716 OR2M2Q96R28 347 aa8.07□□□□□ -1.12
SUPT20H-220ENST00000490716 FOXC2Q99958 501 aa8.07□□□□□ -1.12
SUPT20H-220ENST00000490716 ELAC2Q9BQ52 826 aaKnown RBP8.07□□□□□ -1.12
SUPT20H-220ENST00000490716 ITPR3Q14573 2671 aa8.07□□□□□ -1.12
SUPT20H-220ENST00000490716 A0A096LNT2 108 aa8.07□□□□□ -1.12
SUPT20H-220ENST00000490716 DANCRP0C864 163 aa8.07□□□□□ -1.12
SUPT20H-220ENST00000490716 TCEA1P23193 301 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms