RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 PPP3CBP16298 524 aa16■□□□□ 0.15
COL9A3-214ENST00000490398 CD53P19397 219 aa16■□□□□ 0.15
COL9A3-214ENST00000490398 COX5AP20674 150 aa16■□□□□ 0.15
COL9A3-214ENST00000490398 IL32P24001 234 aa16■□□□□ 0.15
COL9A3-214ENST00000490398 PCGF2P35227 344 aa16■□□□□ 0.15
COL9A3-214ENST00000490398 RPS5P46782 204 aaKnown RBP16■□□□□ 0.15
COL9A3-214ENST00000490398 CYLC2Q14093 348 aaPredicted RBP16■□□□□ 0.15
COL9A3-214ENST00000490398 P2RY6Q15077 328 aa16■□□□□ 0.15
COL9A3-214ENST00000490398 VMACQ2NL98 169 aa16■□□□□ 0.15
COL9A3-214ENST00000490398 MMEL1Q495T6 779 aa16■□□□□ 0.15
COL9A3-214ENST00000490398 COQ5Q5HYK3 327 aa16■□□□□ 0.15
COL9A3-214ENST00000490398 TREML1Q86YW5 311 aa16■□□□□ 0.15
COL9A3-214ENST00000490398 NINJ1Q92982 152 aa16■□□□□ 0.15
COL9A3-214ENST00000490398 KISS1RQ969F8 398 aaPredicted RBP16■□□□□ 0.15
COL9A3-214ENST00000490398 TAAR8Q969N4 342 aa16■□□□□ 0.15
COL9A3-214ENST00000490398 APH1AQ96BI3 265 aa16■□□□□ 0.15
COL9A3-214ENST00000490398 SLC25A36Q96CQ1 311 aa16■□□□□ 0.15
COL9A3-214ENST00000490398 RCN3Q96D15 328 aa16■□□□□ 0.15
COL9A3-214ENST00000490398 PLPPR2Q96GM1 343 aa16■□□□□ 0.15
COL9A3-214ENST00000490398 TRIM2Q9C040 744 aa16■□□□□ 0.15
COL9A3-214ENST00000490398 OR10A4Q9H209 315 aa16■□□□□ 0.15
COL9A3-214ENST00000490398 RPS6KB2Q9UBS0 482 aa16■□□□□ 0.15
COL9A3-214ENST00000490398 PRDM4Q9UKN5 801 aa16■□□□□ 0.15
COL9A3-214ENST00000490398 CAPN7Q9Y6W3 813 aa16■□□□□ 0.15
COL9A3-214ENST00000490398 ITPR3Q14573 2671 aa16■□□□□ 0.15
COL9A3-214ENST00000490398 PRRC2AP48634 2157 aaKnown RBP15.99■□□□□ 0.15
COL9A3-214ENST00000490398 A0A0B4J2E0 115 aa15.99■□□□□ 0.15
COL9A3-214ENST00000490398 A0A1B0GX12 115 aa15.99■□□□□ 0.15
COL9A3-214ENST00000490398 PRORSD1PA6NEY8 169 aa15.99■□□□□ 0.15
COL9A3-214ENST00000490398 ELOA3DA6NLF2 546 aaPredicted RBP15.99■□□□□ 0.15
COL9A3-214ENST00000490398 RAF1P04049 648 aa15.99■□□□□ 0.15
COL9A3-214ENST00000490398 THY1P04216 161 aa15.99■□□□□ 0.15
COL9A3-214ENST00000490398 DNASE1P24855 282 aa15.99■□□□□ 0.15
COL9A3-214ENST00000490398 CDH12P55289 794 aa15.99■□□□□ 0.15
COL9A3-214ENST00000490398 LTBQ06643 244 aa15.99■□□□□ 0.15
COL9A3-214ENST00000490398 LGALS3BPQ08380 585 aa15.99■□□□□ 0.15
COL9A3-214ENST00000490398 NRF1Q16656 503 aa15.99■□□□□ 0.15
COL9A3-214ENST00000490398 ELOA3BQ3SY89 546 aa15.99■□□□□ 0.15
COL9A3-214ENST00000490398 ALG10BQ5I7T1 473 aa15.99■□□□□ 0.15
COL9A3-214ENST00000490398 TSPO2Q5TGU0 170 aa15.99■□□□□ 0.15
COL9A3-214ENST00000490398 FBXW9Q5XUX1 488 aa15.99■□□□□ 0.15
COL9A3-214ENST00000490398 CASP12Q6UXS9 341 aa15.99■□□□□ 0.15
COL9A3-214ENST00000490398 UBE2J2Q8N2K1 259 aa15.99■□□□□ 0.15
COL9A3-214ENST00000490398 ZNF433Q8N7K0 673 aaPredicted RBP15.99■□□□□ 0.15
COL9A3-214ENST00000490398 ELOA3Q8NG57 546 aa15.99■□□□□ 0.15
COL9A3-214ENST00000490398 OR9K2Q8NGE7 335 aa15.99■□□□□ 0.15
COL9A3-214ENST00000490398 OR6T1Q8NGN1 323 aa15.99■□□□□ 0.15
COL9A3-214ENST00000490398 ZNF583Q96ND8 569 aa15.99■□□□□ 0.15
COL9A3-214ENST00000490398 TAPBPLQ9BX59 468 aa15.99■□□□□ 0.15
COL9A3-214ENST00000490398 HDHD5Q9BXW7 423 aa15.99■□□□□ 0.15
COL9A3-214ENST00000490398 UBTD1Q9HAC8 227 aa15.99■□□□□ 0.15
COL9A3-214ENST00000490398 FANCFQ9NPI8 374 aa15.99■□□□□ 0.15
COL9A3-214ENST00000490398 SLC7A10Q9NS82 523 aa15.99■□□□□ 0.15
COL9A3-214ENST00000490398 F8P00451 2351 aa15.99■□□□□ 0.15
COL9A3-214ENST00000490398 CCT8L1PA6NM43 557 aa15.98■□□□□ 0.15
COL9A3-214ENST00000490398 BBIP1A8MTZ0 92 aa15.98■□□□□ 0.15
COL9A3-214ENST00000490398 LRRN3E7EW58 273 aa15.98■□□□□ 0.15
COL9A3-214ENST00000490398 GPR171O14626 319 aa15.98■□□□□ 0.15
COL9A3-214ENST00000490398 MRPL33O75394 65 aaKnown RBP15.98■□□□□ 0.15
COL9A3-214ENST00000490398 LYPD3O95274 346 aa15.98■□□□□ 0.15
COL9A3-214ENST00000490398 AHSA1O95433 338 aa15.98■□□□□ 0.15
COL9A3-214ENST00000490398 PNMTP11086 282 aa15.98■□□□□ 0.15
COL9A3-214ENST00000490398 TNFRSF1BP20333 461 aa15.98■□□□□ 0.15
COL9A3-214ENST00000490398 CBLP22681 906 aa15.98■□□□□ 0.15
COL9A3-214ENST00000490398 FAPQ12884 760 aa15.98■□□□□ 0.15
COL9A3-214ENST00000490398 MAPRE2Q15555 327 aa15.98■□□□□ 0.15
COL9A3-214ENST00000490398 STK11Q15831 433 aa15.98■□□□□ 0.15
COL9A3-214ENST00000490398 BEX5Q5H9J7 111 aa15.98■□□□□ 0.15
COL9A3-214ENST00000490398 C9orf135Q5VTT2 229 aa15.98■□□□□ 0.15
COL9A3-214ENST00000490398 SPNS3Q6ZMD2 512 aa15.98■□□□□ 0.15
COL9A3-214ENST00000490398 GPAT4Q86UL3 456 aa15.98■□□□□ 0.15
COL9A3-214ENST00000490398 EPHX4Q8IUS5 362 aa15.98■□□□□ 0.15
COL9A3-214ENST00000490398 OR8J3Q8NGG0 315 aa15.98■□□□□ 0.15
COL9A3-214ENST00000490398 MFSD8Q8NHS3 518 aa15.98■□□□□ 0.15
COL9A3-214ENST00000490398 VANGL1Q8TAA9 524 aaPredicted RBP15.98■□□□□ 0.15
COL9A3-214ENST00000490398 SLC38A4Q969I6 547 aa15.98■□□□□ 0.15
COL9A3-214ENST00000490398 MCHR1Q99705 422 aa15.98■□□□□ 0.15
COL9A3-214ENST00000490398 FOXC2Q99958 501 aa15.98■□□□□ 0.15
COL9A3-214ENST00000490398 ELAC2Q9BQ52 826 aaKnown RBP15.98■□□□□ 0.15
COL9A3-214ENST00000490398 CXXC4Q9H2H0 198 aa15.98■□□□□ 0.15
COL9A3-214ENST00000490398 C12orf10Q9HB07 376 aa15.98■□□□□ 0.15
COL9A3-214ENST00000490398 CMTM6Q9NX76 183 aa15.98■□□□□ 0.15
COL9A3-214ENST00000490398 TESQ9UGI8 421 aaKnown RBP15.98■□□□□ 0.15
COL9A3-214ENST00000490398 ANK3Q12955 4377 aaKnown RBP15.97■□□□□ 0.15
COL9A3-214ENST00000490398 A0A1W2PR80 420 aa15.97■□□□□ 0.15
COL9A3-214ENST00000490398 PDLIM1O00151 329 aa15.97■□□□□ 0.15
COL9A3-214ENST00000490398 RAD51DO75771 328 aa15.97■□□□□ 0.15
COL9A3-214ENST00000490398 ITGA5P08648 1049 aa15.97■□□□□ 0.15
COL9A3-214ENST00000490398 DRD4P21917 467 aa15.97■□□□□ 0.15
COL9A3-214ENST00000490398 KEAP1Q14145 624 aa15.97■□□□□ 0.15
COL9A3-214ENST00000490398 ULK3Q6PHR2 472 aa15.97■□□□□ 0.15
COL9A3-214ENST00000490398 WDR88Q6ZMY6 472 aa15.97■□□□□ 0.15
COL9A3-214ENST00000490398 CREB3L2Q70SY1 520 aa15.97■□□□□ 0.15
COL9A3-214ENST00000490398 CCDC80Q76M96 950 aa15.97■□□□□ 0.15
COL9A3-214ENST00000490398 PATL1Q86TB9 770 aaKnown RBP15.97■□□□□ 0.15
COL9A3-214ENST00000490398 RNF217Q8TC41 542 aa15.97■□□□□ 0.15
COL9A3-214ENST00000490398 ECSITQ9BQ95 431 aa15.97■□□□□ 0.15
COL9A3-214ENST00000490398 TMEM204Q9BSN7 226 aa15.97■□□□□ 0.15
COL9A3-214ENST00000490398 TMEM27Q9HBJ8 222 aa15.97■□□□□ 0.15
COL9A3-214ENST00000490398 NPAP1Q9NZP6 1156 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms