RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 IMPAD1Q9NX62 359 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 QPCTLQ9NXS2 382 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 ZNF226Q9NYT6 803 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 B4GALT7Q9UBV7 327 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 BAIAP2Q9UQB8 552 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 RNF6Q9Y252 685 aa12.78□□□□□ -0.36
VPS26A-205ENST00000489656 ZNF407Q9C0G0 2248 aa12.77□□□□□ -0.36
VPS26A-205ENST00000489656 PTPRQQ9UMZ3 2332 aa12.77□□□□□ -0.36
VPS26A-205ENST00000489656 OR2M5A3KFT3 312 aa12.77□□□□□ -0.37
VPS26A-205ENST00000489656 TRIM64A6NGJ6 449 aa12.77□□□□□ -0.37
VPS26A-205ENST00000489656 SHISA8B8ZZ34 492 aa12.77□□□□□ -0.37
VPS26A-205ENST00000489656 LRRN3E7EW58 273 aa12.77□□□□□ -0.37
VPS26A-205ENST00000489656 K7ENP7 123 aa12.77□□□□□ -0.37
VPS26A-205ENST00000489656 BHLHE40O14503 412 aa12.77□□□□□ -0.37
VPS26A-205ENST00000489656 HMGN1P05114 100 aa12.77□□□□□ -0.37
VPS26A-205ENST00000489656 HPNP05981 417 aa12.77□□□□□ -0.37
VPS26A-205ENST00000489656 LYNP07948 512 aa12.77□□□□□ -0.37
VPS26A-205ENST00000489656 RPSAP08865 295 aaKnown RBP12.77□□□□□ -0.37
VPS26A-205ENST00000489656 RFPL3SP0C7P2 107 aa12.77□□□□□ -0.37
VPS26A-205ENST00000489656 SLC6A6P31641 620 aa12.77□□□□□ -0.37
VPS26A-205ENST00000489656 UQCRC1P31930 480 aa12.77□□□□□ -0.37
VPS26A-205ENST00000489656 UCNP55089 124 aa12.77□□□□□ -0.37
VPS26A-205ENST00000489656 B3GALT5-AS1P59052 145 aa12.77□□□□□ -0.37
VPS26A-205ENST00000489656 TLE3Q04726 772 aa12.77□□□□□ -0.37
VPS26A-205ENST00000489656 TOP3AQ13472 1001 aaPredicted RBP12.77□□□□□ -0.37
VPS26A-205ENST00000489656 SYT14P1Q58G82 188 aa12.77□□□□□ -0.37
VPS26A-205ENST00000489656 ZNF766Q5HY98 468 aa12.77□□□□□ -0.37
VPS26A-205ENST00000489656 RBM48Q5RL73 367 aaKnown RBP12.77□□□□□ -0.37
VPS26A-205ENST00000489656 SLC25A30Q5SVS4 291 aa12.77□□□□□ -0.37
VPS26A-205ENST00000489656 C6orf141Q5SZD1 244 aa12.77□□□□□ -0.37
VPS26A-205ENST00000489656 C1QL3Q5VWW1 255 aa12.77□□□□□ -0.37
VPS26A-205ENST00000489656 LAIR2Q6ISS4 152 aa12.77□□□□□ -0.37
VPS26A-205ENST00000489656 INO80CQ6PI98 192 aaPredicted RBP12.77□□□□□ -0.37
VPS26A-205ENST00000489656 THSD4Q6ZMP0 1018 aa12.77□□□□□ -0.37
VPS26A-205ENST00000489656 MAMDC2Q7Z304 686 aaPredicted RBP12.77□□□□□ -0.37
VPS26A-205ENST00000489656 IQCF1Q8N6M8 205 aa12.77□□□□□ -0.37
VPS26A-205ENST00000489656 LRRC17Q8N6Y2 441 aa12.77□□□□□ -0.37
VPS26A-205ENST00000489656 ZFP62Q8NB50 900 aaPredicted RBP12.77□□□□□ -0.37
VPS26A-205ENST00000489656 OR8J1Q8NGP2 316 aa12.77□□□□□ -0.37
VPS26A-205ENST00000489656 OR4Q3Q8NH05 313 aa12.77□□□□□ -0.37
VPS26A-205ENST00000489656 OR51A7Q8NH64 312 aa12.77□□□□□ -0.37
VPS26A-205ENST00000489656 OR11A1Q9GZK7 315 aa12.77□□□□□ -0.37
VPS26A-205ENST00000489656 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.77□□□□□ -0.37
VPS26A-205ENST00000489656 MYRFQ9Y2G1 1151 aa12.77□□□□□ -0.37
VPS26A-205ENST00000489656 HDGFL3Q9Y3E1 203 aa12.77□□□□□ -0.37
VPS26A-205ENST00000489656 PCDHGB7Q9Y5F8 929 aa12.77□□□□□ -0.37
VPS26A-205ENST00000489656 CORINQ9Y5Q5 1042 aa12.77□□□□□ -0.37
VPS26A-205ENST00000489656 FRYQ5TBA9 3013 aa12.77□□□□□ -0.37
VPS26A-205ENST00000489656 LOC400499M0QZD8 3231 aa12.76□□□□□ -0.37
VPS26A-205ENST00000489656 TRAV17A0A0B4J275 112 aa12.76□□□□□ -0.37
VPS26A-205ENST00000489656 LINC01387J3KSC0 135 aa12.76□□□□□ -0.37
VPS26A-205ENST00000489656 WBP4O75554 376 aaKnown RBP12.76□□□□□ -0.37
VPS26A-205ENST00000489656 CCDC159P0C7I6 412 aa12.76□□□□□ -0.37
VPS26A-205ENST00000489656 IL11P20809 199 aa12.76□□□□□ -0.37
VPS26A-205ENST00000489656 IDUAP35475 653 aa12.76□□□□□ -0.37
VPS26A-205ENST00000489656 PCYT1AP49585 367 aa12.76□□□□□ -0.37
VPS26A-205ENST00000489656 MEOX1P50221 254 aa12.76□□□□□ -0.37
VPS26A-205ENST00000489656 SGCBQ16585 318 aa12.76□□□□□ -0.37
VPS26A-205ENST00000489656 KCTD21Q4G0X4 260 aa12.76□□□□□ -0.37
VPS26A-205ENST00000489656 CLEC12AQ5QGZ9 265 aa12.76□□□□□ -0.37
VPS26A-205ENST00000489656 TMEM201Q5SNT2 666 aa12.76□□□□□ -0.37
VPS26A-205ENST00000489656 RAET1LQ5VY80 246 aa12.76□□□□□ -0.37
VPS26A-205ENST00000489656 DPY19L2P2Q6ZN68 376 aa12.76□□□□□ -0.37
VPS26A-205ENST00000489656 PTCHD4Q6ZW05 846 aa12.76□□□□□ -0.37
VPS26A-205ENST00000489656 GALNTL5Q7Z4T8 443 aa12.76□□□□□ -0.37
VPS26A-205ENST00000489656 NANOGNBQ7Z5D8 188 aa12.76□□□□□ -0.37
VPS26A-205ENST00000489656 ZNF786Q8N393 782 aa12.76□□□□□ -0.37
VPS26A-205ENST00000489656 C10orf53Q8N6V4 93 aa12.76□□□□□ -0.37
VPS26A-205ENST00000489656 SCAIQ8N9R8 606 aa12.76□□□□□ -0.37
VPS26A-205ENST00000489656 LRRC75AQ8NAA5 344 aa12.76□□□□□ -0.37
VPS26A-205ENST00000489656 FAM83FQ8NEG4 500 aaPredicted RBP12.76□□□□□ -0.37
VPS26A-205ENST00000489656 OR5J2Q8NH18 312 aa12.76□□□□□ -0.37
VPS26A-205ENST00000489656 APH1BQ8WW43 257 aa12.76□□□□□ -0.37
VPS26A-205ENST00000489656 TM9SF4Q92544 642 aa12.76□□□□□ -0.37
VPS26A-205ENST00000489656 SLC38A2Q96QD8 506 aa12.76□□□□□ -0.37
VPS26A-205ENST00000489656 TTTY12Q9BZ98 90 aa12.76□□□□□ -0.37
VPS26A-205ENST00000489656 NDEL1Q9GZM8 345 aa12.76□□□□□ -0.37
VPS26A-205ENST00000489656 ENKD1Q9H0I2 346 aa12.76□□□□□ -0.37
VPS26A-205ENST00000489656 ADNPQ9H2P0 1102 aa12.76□□□□□ -0.37
VPS26A-205ENST00000489656 SLC24A3Q9HC58 644 aa12.76□□□□□ -0.37
VPS26A-205ENST00000489656 MRPL39Q9NYK5 338 aaKnown RBP12.76□□□□□ -0.37
VPS26A-205ENST00000489656 SLC6A5Q9Y345 797 aa12.76□□□□□ -0.37
VPS26A-205ENST00000489656 LIPT2A6NK58 231 aa12.75□□□□□ -0.37
VPS26A-205ENST00000489656 ARPC3O15145 178 aa12.75□□□□□ -0.37
VPS26A-205ENST00000489656 SURF4O15260 269 aa12.75□□□□□ -0.37
VPS26A-205ENST00000489656 IDH3BO43837 385 aa12.75□□□□□ -0.37
VPS26A-205ENST00000489656 HIST1H2ABP04908 130 aa12.75□□□□□ -0.37
VPS26A-205ENST00000489656 IMPDH2P12268 514 aa12.75□□□□□ -0.37
VPS26A-205ENST00000489656 APEHP13798 732 aaKnown RBP12.75□□□□□ -0.37
VPS26A-205ENST00000489656 GDF1P27539 372 aa12.75□□□□□ -0.37
VPS26A-205ENST00000489656 GRPRP30550 384 aa12.75□□□□□ -0.37
VPS26A-205ENST00000489656 RAC1P63000 192 aa12.75□□□□□ -0.37
VPS26A-205ENST00000489656 CSNK2BP67870 215 aa12.75□□□□□ -0.37
VPS26A-205ENST00000489656 ZNF239Q16600 458 aaKnown RBP12.75□□□□□ -0.37
VPS26A-205ENST00000489656 LRRC69Q6ZNQ3 347 aa12.75□□□□□ -0.37
VPS26A-205ENST00000489656 HIST3H2AQ7L7L0 130 aa12.75□□□□□ -0.37
VPS26A-205ENST00000489656 CCDC103Q8IW40 242 aa12.75□□□□□ -0.37
VPS26A-205ENST00000489656 FAM26EQ8N5C1 309 aa12.75□□□□□ -0.37
VPS26A-205ENST00000489656 ADPRHL1Q8NDY3 354 aa12.75□□□□□ -0.37
VPS26A-205ENST00000489656 OR5M1Q8NGP8 315 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms