RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 AP3M2P53677 418 aa2.43□□□□□ -2.02
PTPN4-212ENST00000488896 PLA2G16P53816 162 aa2.43□□□□□ -2.02
PTPN4-212ENST00000488896 HSD17B7P56937 341 aa2.43□□□□□ -2.02
PTPN4-212ENST00000488896 RAB12Q6IQ22 244 aa2.43□□□□□ -2.02
PTPN4-212ENST00000488896 CBLN3Q6UW01 205 aa2.43□□□□□ -2.02
PTPN4-212ENST00000488896 Q6ZR03 302 aa2.43□□□□□ -2.02
PTPN4-212ENST00000488896 MCOLN3Q8TDD5 553 aa2.43□□□□□ -2.02
PTPN4-212ENST00000488896 PAGE5Q96GU1 130 aa2.43□□□□□ -2.02
PTPN4-212ENST00000488896 NPAS2Q99743 824 aa2.43□□□□□ -2.02
PTPN4-212ENST00000488896 ALG12Q9BV10 488 aa2.43□□□□□ -2.02
PTPN4-212ENST00000488896 RNF167Q9H6Y7 350 aa2.43□□□□□ -2.02
PTPN4-212ENST00000488896 ZFP14Q9HCL3 533 aa2.43□□□□□ -2.02
PTPN4-212ENST00000488896 NCAPD2Q15021 1401 aa2.42□□□□□ -2.02
PTPN4-212ENST00000488896 ABCC9O60706 1549 aa2.42□□□□□ -2.02
PTPN4-212ENST00000488896 RBMY1BA6NDE4 496 aaKnown RBP2.42□□□□□ -2.02
PTPN4-212ENST00000488896 RBMY1EA6NEQ0 496 aaKnown RBP2.42□□□□□ -2.02
PTPN4-212ENST00000488896 TRDCB7Z8K6 153 aa2.42□□□□□ -2.02
PTPN4-212ENST00000488896 CTAGE5O15320 804 aa2.42□□□□□ -2.02
PTPN4-212ENST00000488896 CXCL13O43927 109 aa2.42□□□□□ -2.02
PTPN4-212ENST00000488896 LGALS2P05162 132 aa2.42□□□□□ -2.02
PTPN4-212ENST00000488896 KLK3P07288 261 aaPredicted RBP2.42□□□□□ -2.02
PTPN4-212ENST00000488896 RBMY1DP0C7P1 496 aaKnown RBP2.42□□□□□ -2.02
PTPN4-212ENST00000488896 RBMY1A1P0DJD3 496 aaKnown RBP2.42□□□□□ -2.02
PTPN4-212ENST00000488896 NPY1RP25929 384 aa2.42□□□□□ -2.02
PTPN4-212ENST00000488896 CALCRP30988 508 aa2.42□□□□□ -2.02
PTPN4-212ENST00000488896 RFC4P35249 363 aa2.42□□□□□ -2.02
PTPN4-212ENST00000488896 ATP6V1E1P36543 226 aa2.42□□□□□ -2.02
PTPN4-212ENST00000488896 UBE2AP49459 152 aa2.42□□□□□ -2.02
PTPN4-212ENST00000488896 STARD6P59095 220 aa2.42□□□□□ -2.02
PTPN4-212ENST00000488896 SNTB2Q13425 540 aaKnown RBP2.42□□□□□ -2.02
PTPN4-212ENST00000488896 KIAA0087Q14695 138 aa2.42□□□□□ -2.02
PTPN4-212ENST00000488896 CHRFAM7AQ494W8 412 aa2.42□□□□□ -2.02
PTPN4-212ENST00000488896 TP53I3Q53FA7 332 aa2.42□□□□□ -2.02
PTPN4-212ENST00000488896 NANOGP8Q6NSW7 305 aa2.42□□□□□ -2.02
PTPN4-212ENST00000488896 DHRSXQ8N5I4 330 aa2.42□□□□□ -2.02
PTPN4-212ENST00000488896 OR4F15Q8NGB8 312 aa2.42□□□□□ -2.02
PTPN4-212ENST00000488896 OR4D9Q8NGE8 314 aa2.42□□□□□ -2.02
PTPN4-212ENST00000488896 MRPL38Q96DV4 380 aaKnown RBP2.42□□□□□ -2.02
PTPN4-212ENST00000488896 CMTM7Q96FZ5 175 aa2.42□□□□□ -2.02
PTPN4-212ENST00000488896 BMFQ96LC9 184 aa2.42□□□□□ -2.02
PTPN4-212ENST00000488896 ZNF670Q9BS34 389 aa2.42□□□□□ -2.02
PTPN4-212ENST00000488896 NDFIP1Q9BT67 221 aa2.42□□□□□ -2.02
PTPN4-212ENST00000488896 SIRT7Q9NRC8 400 aa2.42□□□□□ -2.02
PTPN4-212ENST00000488896 QPCTLQ9NXS2 382 aa2.42□□□□□ -2.02
PTPN4-212ENST00000488896 SIGLEC8Q9NYZ4 499 aa2.42□□□□□ -2.02
PTPN4-212ENST00000488896 PCYOX1Q9UHG3 505 aa2.42□□□□□ -2.02
PTPN4-212ENST00000488896 LRP4O75096 1905 aa2.42□□□□□ -2.02
PTPN4-212ENST00000488896 NSG1A0A0A6YYJ2 146 aa2.41□□□□□ -2.02
PTPN4-212ENST00000488896 GSAPA4D1B5 854 aa2.41□□□□□ -2.02
PTPN4-212ENST00000488896 SCGB2A1O75556 95 aa2.41□□□□□ -2.02
PTPN4-212ENST00000488896 OPN1MWP04001 364 aa2.41□□□□□ -2.02
PTPN4-212ENST00000488896 H2BFMP0C1H6 154 aa2.41□□□□□ -2.02
PTPN4-212ENST00000488896 OPN1MW2P0DN77 364 aa2.41□□□□□ -2.02
PTPN4-212ENST00000488896 OPN1MW3P0DN78 364 aa2.41□□□□□ -2.02
PTPN4-212ENST00000488896 TNNI3P19429 210 aa2.41□□□□□ -2.02
PTPN4-212ENST00000488896 CNR1P21554 472 aa2.41□□□□□ -2.02
PTPN4-212ENST00000488896 GMFBP60983 142 aa2.41□□□□□ -2.02
PTPN4-212ENST00000488896 RPS14P62263 151 aaKnown RBP2.41□□□□□ -2.02
PTPN4-212ENST00000488896 ENPEPQ07075 957 aa2.41□□□□□ -2.02
PTPN4-212ENST00000488896 SMARCB1Q12824 385 aa2.41□□□□□ -2.02
PTPN4-212ENST00000488896 GNMTQ14749 295 aa2.41□□□□□ -2.02
PTPN4-212ENST00000488896 PARP15Q460N3 678 aa2.41□□□□□ -2.02
PTPN4-212ENST00000488896 TMEM255AQ5JRV8 349 aa2.41□□□□□ -2.02
PTPN4-212ENST00000488896 KCNIP4Q6PIL6 250 aa2.41□□□□□ -2.02
PTPN4-212ENST00000488896 LRRC43Q8N309 656 aa2.41□□□□□ -2.02
PTPN4-212ENST00000488896 STXBP6Q8NFX7 210 aa2.41□□□□□ -2.02
PTPN4-212ENST00000488896 OR10A7Q8NGE5 316 aa2.41□□□□□ -2.02
PTPN4-212ENST00000488896 SYNPRQ8TBG9 265 aa2.41□□□□□ -2.02
PTPN4-212ENST00000488896 ZFP90Q8TF47 636 aa2.41□□□□□ -2.02
PTPN4-212ENST00000488896 HTR3CQ8WXA8 447 aa2.41□□□□□ -2.02
PTPN4-212ENST00000488896 RMI2Q96E14 147 aa2.41□□□□□ -2.02
PTPN4-212ENST00000488896 SEC22AQ96IW7 307 aa2.41□□□□□ -2.02
PTPN4-212ENST00000488896 ACTR6Q9GZN1 396 aa2.41□□□□□ -2.02
PTPN4-212ENST00000488896 WDR76Q9H967 626 aa2.41□□□□□ -2.02
PTPN4-212ENST00000488896 HOXC10Q9NYD6 342 aa2.41□□□□□ -2.02
PTPN4-212ENST00000488896 TBK1Q9UHD2 729 aa2.41□□□□□ -2.02
PTPN4-212ENST00000488896 CHADO15335 359 aa2.4□□□□□ -2.03
PTPN4-212ENST00000488896 UGT1A9O60656 530 aa2.4□□□□□ -2.03
PTPN4-212ENST00000488896 POU2F1P14859 743 aa2.4□□□□□ -2.03
PTPN4-212ENST00000488896 CYP2F1P24903 491 aa2.4□□□□□ -2.03
PTPN4-212ENST00000488896 SPIBQ01892 262 aa2.4□□□□□ -2.03
PTPN4-212ENST00000488896 SAMD4BQ5PRF9 694 aaKnown RBP2.4□□□□□ -2.03
PTPN4-212ENST00000488896 PLBD1Q6P4A8 553 aa2.4□□□□□ -2.03
PTPN4-212ENST00000488896 ARRDC1Q8N5I2 433 aa2.4□□□□□ -2.03
PTPN4-212ENST00000488896 FAM86B1Q8N7N1 296 aa2.4□□□□□ -2.03
PTPN4-212ENST00000488896 MRPL43Q8N983 215 aaKnown RBP2.4□□□□□ -2.03
PTPN4-212ENST00000488896 OR10G9Q8NGN4 311 aa2.4□□□□□ -2.03
PTPN4-212ENST00000488896 MRPL13Q9BYD1 178 aaKnown RBP2.4□□□□□ -2.03
PTPN4-212ENST00000488896 DNTTIP1Q9H147 329 aa2.4□□□□□ -2.03
PTPN4-212ENST00000488896 SLC17A5Q9NRA2 495 aa2.4□□□□□ -2.03
PTPN4-212ENST00000488896 CLCF1Q9UBD9 225 aa2.4□□□□□ -2.03
PTPN4-212ENST00000488896 AK6Q9Y3D8 172 aaKnown RBP2.4□□□□□ -2.03
PTPN4-212ENST00000488896 HIVEP2P31629 2446 aa2.39□□□□□ -2.03
PTPN4-212ENST00000488896 BET1O15155 118 aa2.39□□□□□ -2.03
PTPN4-212ENST00000488896 ADCY5O95622 1261 aa2.39□□□□□ -2.03
PTPN4-212ENST00000488896 IGLV2-23P01705 113 aa2.39□□□□□ -2.03
PTPN4-212ENST00000488896 HPGDP15428 266 aa2.39□□□□□ -2.03
PTPN4-212ENST00000488896 MUC1P15941 1255 aaPredicted RBP2.39□□□□□ -2.03
PTPN4-212ENST00000488896 GPM6AP51674 278 aa2.39□□□□□ -2.03
PTPN4-212ENST00000488896 PKNOX1P55347 436 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms