RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 TAPBPLQ9BX59 468 aa9.86□□□□□ -0.83
UBE4B-210ENST00000488228 POTEKPQ9BYX7 375 aa9.86□□□□□ -0.83
UBE4B-210ENST00000488228 UCK2Q9BZX2 261 aa9.86□□□□□ -0.83
UBE4B-210ENST00000488228 POLR2J2Q9GZM3 115 aaKnown RBP9.86□□□□□ -0.83
UBE4B-210ENST00000488228 POLR2J3Q9H1A7 115 aaKnown RBP9.86□□□□□ -0.83
UBE4B-210ENST00000488228 NDUFAF4Q9P032 175 aa9.86□□□□□ -0.83
UBE4B-210ENST00000488228 SLC7A8Q9UHI5 535 aa9.86□□□□□ -0.83
UBE4B-210ENST00000488228 PRDM4Q9UKN5 801 aa9.86□□□□□ -0.83
UBE4B-210ENST00000488228 ENO4A6NNW6 628 aa9.85□□□□□ -0.83
UBE4B-210ENST00000488228 EEF1E1-BLOC1S5C9J1V9 151 aa9.85□□□□□ -0.83
UBE4B-210ENST00000488228 M0R082 166 aa9.85□□□□□ -0.83
UBE4B-210ENST00000488228 DVL2O14641 736 aa9.85□□□□□ -0.83
UBE4B-210ENST00000488228 EEF1E1O43324 174 aaKnown RBP9.85□□□□□ -0.83
UBE4B-210ENST00000488228 DNPH1O43598 174 aa9.85□□□□□ -0.83
UBE4B-210ENST00000488228 CYTIPO60759 359 aa9.85□□□□□ -0.83
UBE4B-210ENST00000488228 SS18L1O75177 396 aaPredicted RBP9.85□□□□□ -0.83
UBE4B-210ENST00000488228 CLDN1O95832 211 aa9.85□□□□□ -0.83
UBE4B-210ENST00000488228 BGLAPP02818 100 aa9.85□□□□□ -0.83
UBE4B-210ENST00000488228 GPIP06744 558 aa9.85□□□□□ -0.83
UBE4B-210ENST00000488228 CTSSP25774 331 aa9.85□□□□□ -0.83
UBE4B-210ENST00000488228 FKBP2P26885 142 aaKnown RBP9.85□□□□□ -0.83
UBE4B-210ENST00000488228 GTF2E2P29084 291 aaKnown RBP9.85□□□□□ -0.83
UBE4B-210ENST00000488228 GRPRP30550 384 aa9.85□□□□□ -0.83
UBE4B-210ENST00000488228 AGTR1P30556 359 aa9.85□□□□□ -0.83
UBE4B-210ENST00000488228 LSM11P83369 360 aaKnown RBP eCLIP9.85□□□□□ -0.83
UBE4B-210ENST00000488228 GUSBP1Q15486 140 aa9.85□□□□□ -0.83
UBE4B-210ENST00000488228 OTUD3Q5T2D3 398 aaPredicted RBP9.85□□□□□ -0.83
UBE4B-210ENST00000488228 FAM69AQ5T7M9 428 aa9.85□□□□□ -0.83
UBE4B-210ENST00000488228 LINC00114Q6XXX2 140 aa9.85□□□□□ -0.83
UBE4B-210ENST00000488228 CYP4Z1Q86W10 505 aa9.85□□□□□ -0.83
UBE4B-210ENST00000488228 MEX3DQ86XN8 651 aaKnown RBP9.85□□□□□ -0.83
UBE4B-210ENST00000488228 CCDC103Q8IW40 242 aa9.85□□□□□ -0.83
UBE4B-210ENST00000488228 MCEMP1Q8IX19 187 aa9.85□□□□□ -0.83
UBE4B-210ENST00000488228 C10orf53Q8N6V4 93 aa9.85□□□□□ -0.83
UBE4B-210ENST00000488228 TMEM99Q8N816 258 aa9.85□□□□□ -0.83
UBE4B-210ENST00000488228 ZNF417Q8TAU3 575 aa9.85□□□□□ -0.83
UBE4B-210ENST00000488228 CA5BP1Q8WTZ4 195 aa9.85□□□□□ -0.83
UBE4B-210ENST00000488228 ASB5Q8WWX0 329 aa9.85□□□□□ -0.83
UBE4B-210ENST00000488228 GMPPAQ96IJ6 420 aaPredicted RBP9.85□□□□□ -0.83
UBE4B-210ENST00000488228 MPP4Q96JB8 637 aa9.85□□□□□ -0.83
UBE4B-210ENST00000488228 LRGUKQ96M69 825 aa9.85□□□□□ -0.83
UBE4B-210ENST00000488228 ZFP3Q96NJ6 502 aa9.85□□□□□ -0.83
UBE4B-210ENST00000488228 ZNF300Q96RE9 604 aaPredicted RBP9.85□□□□□ -0.83
UBE4B-210ENST00000488228 ZNF587Q96SQ5 575 aaPredicted RBP9.85□□□□□ -0.83
UBE4B-210ENST00000488228 EPYCQ99645 322 aa9.85□□□□□ -0.83
UBE4B-210ENST00000488228 PSD2Q9BQI7 771 aa9.85□□□□□ -0.83
UBE4B-210ENST00000488228 FNDC11Q9BVV2 318 aa9.85□□□□□ -0.83
UBE4B-210ENST00000488228 SFXN3Q9BWM7 321 aa9.85□□□□□ -0.83
UBE4B-210ENST00000488228 TRIM15Q9C019 465 aa9.85□□□□□ -0.83
UBE4B-210ENST00000488228 ING1Q9UK53 422 aaPredicted RBP9.85□□□□□ -0.83
UBE4B-210ENST00000488228 POMPQ9Y244 141 aa9.85□□□□□ -0.83
UBE4B-210ENST00000488228 TRAPPC4Q9Y296 219 aa9.85□□□□□ -0.83
UBE4B-210ENST00000488228 TESMINQ9Y4I5 508 aa9.85□□□□□ -0.83
UBE4B-210ENST00000488228 CENPEQ02224 2701 aa9.85□□□□□ -0.83
UBE4B-210ENST00000488228 AQP7P3A6NL99 342 aa9.84□□□□□ -0.83
UBE4B-210ENST00000488228 ZNF716A6NP11 495 aa9.84□□□□□ -0.83
UBE4B-210ENST00000488228 SMNDC1O75940 238 aaKnown RBP eCLIP9.84□□□□□ -0.833e-6■□□□□ 9.1
UBE4B-210ENST00000488228 CLDN14O95500 239 aa9.84□□□□□ -0.83
UBE4B-210ENST00000488228 STAMBPO95630 424 aa9.84□□□□□ -0.83
UBE4B-210ENST00000488228 FABP3P05413 133 aa9.84□□□□□ -0.83
UBE4B-210ENST00000488228 KIR2DL2P43627 348 aaPredicted RBP9.84□□□□□ -0.83
UBE4B-210ENST00000488228 CTBP2P56545 445 aa9.84□□□□□ -0.83
UBE4B-210ENST00000488228 SPIBQ01892 262 aa9.84□□□□□ -0.83
UBE4B-210ENST00000488228 LTBQ06643 244 aa9.84□□□□□ -0.83
UBE4B-210ENST00000488228 RASGEF1BQ0VAM2 473 aa9.84□□□□□ -0.83
UBE4B-210ENST00000488228 ST3GAL3Q11203 375 aa9.84□□□□□ -0.83
UBE4B-210ENST00000488228 TRAP1Q12931 704 aaKnown RBP9.84□□□□□ -0.83
UBE4B-210ENST00000488228 RNPS1Q15287 305 aaKnown RBP9.84□□□□□ -0.83
UBE4B-210ENST00000488228 IQCCQ4KMZ1 466 aa9.84□□□□□ -0.83
UBE4B-210ENST00000488228 FGD3Q5JSP0 725 aa9.84□□□□□ -0.83
UBE4B-210ENST00000488228 TTC33Q6PID6 262 aaPredicted RBP9.84□□□□□ -0.83
UBE4B-210ENST00000488228 XKRXQ6PP77 449 aa9.84□□□□□ -0.83
UBE4B-210ENST00000488228 PAQR6Q6TCH4 344 aa9.84□□□□□ -0.83
UBE4B-210ENST00000488228 C5orf46Q6UWT4 87 aa9.84□□□□□ -0.83
UBE4B-210ENST00000488228 ASRGL1Q7L266 308 aa9.84□□□□□ -0.83
UBE4B-210ENST00000488228 FAM214BQ7L5A3 538 aa9.84□□□□□ -0.83
UBE4B-210ENST00000488228 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.84□□□□□ -0.83
UBE4B-210ENST00000488228 BTLAQ7Z6A9 289 aa9.84□□□□□ -0.83
UBE4B-210ENST00000488228 TUSC5Q8IXB3 177 aa9.84□□□□□ -0.83
UBE4B-210ENST00000488228 PIK3C3Q8NEB9 887 aa9.84□□□□□ -0.83
UBE4B-210ENST00000488228 MFSD8Q8NHS3 518 aa9.84□□□□□ -0.83
UBE4B-210ENST00000488228 PIGXQ8TBF5 258 aa9.84□□□□□ -0.83
UBE4B-210ENST00000488228 TMEM239Q8WW34 195 aa9.84□□□□□ -0.83
UBE4B-210ENST00000488228 UTP4Q969X6 686 aaKnown RBP9.84□□□□□ -0.83
UBE4B-210ENST00000488228 ZNF775Q96BV0 537 aaPredicted RBP9.84□□□□□ -0.83
UBE4B-210ENST00000488228 PIP5K1AQ99755 562 aa9.84□□□□□ -0.83
UBE4B-210ENST00000488228 OPN3Q9H1Y3 402 aaPredicted RBP9.84□□□□□ -0.83
UBE4B-210ENST00000488228 C12orf49Q9H741 205 aa9.84□□□□□ -0.83
UBE4B-210ENST00000488228 MEPEQ9NQ76 525 aaPredicted RBP9.84□□□□□ -0.83
UBE4B-210ENST00000488228 C20orf141Q9NUB4 165 aa9.84□□□□□ -0.83
UBE4B-210ENST00000488228 C6orf203Q9P0P8 240 aaPredicted RBP9.84□□□□□ -0.83
UBE4B-210ENST00000488228 KLHL9Q9P2J3 617 aa9.84□□□□□ -0.83
UBE4B-210ENST00000488228 EMC9Q9Y3B6 208 aa9.84□□□□□ -0.83
UBE4B-210ENST00000488228 PKDREJQ9NTG1 2253 aa9.84□□□□□ -0.83
UBE4B-210ENST00000488228 ASH1LQ9NR48 2969 aaKnown RBP9.83□□□□□ -0.84
UBE4B-210ENST00000488228 ADGRG4Q8IZF6 3080 aa9.83□□□□□ -0.84
UBE4B-210ENST00000488228 TRBV4-1A0A0J9YWV2 114 aa9.83□□□□□ -0.84
UBE4B-210ENST00000488228 C19orf84I3L1E1 186 aa9.83□□□□□ -0.84
UBE4B-210ENST00000488228 EIF1BO60739 113 aaKnown RBP9.83□□□□□ -0.84
UBE4B-210ENST00000488228 FZD7O75084 574 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms