RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 RUNX1T1Q06455 604 aa16.89■□□□□ 0.29
SMPDL3A-202ENST00000487215 LGALS3BPQ08380 585 aa16.89■□□□□ 0.29
SMPDL3A-202ENST00000487215 CEACAM7Q14002 265 aa16.89■□□□□ 0.29
SMPDL3A-202ENST00000487215 OR7A5Q15622 319 aa16.89■□□□□ 0.29
SMPDL3A-202ENST00000487215 CMIPQ8IY22 773 aa16.89■□□□□ 0.29
SMPDL3A-202ENST00000487215 ALKBH3Q96Q83 286 aaPredicted RBP16.89■□□□□ 0.29
SMPDL3A-202ENST00000487215 RAB1BQ9H0U4 201 aa16.89■□□□□ 0.29
SMPDL3A-202ENST00000487215 SEC61A2Q9H9S3 476 aa16.89■□□□□ 0.29
SMPDL3A-202ENST00000487215 CRNNQ9UBG3 495 aaPredicted RBP16.89■□□□□ 0.29
SMPDL3A-202ENST00000487215 MARCOQ9UEW3 520 aaPredicted RBP16.89■□□□□ 0.29
SMPDL3A-202ENST00000487215 TMEFF2Q9UIK5 374 aaPredicted RBP16.89■□□□□ 0.29
SMPDL3A-202ENST00000487215 PRSS51A0A1B0GVH4 220 aa16.88■□□□□ 0.29
SMPDL3A-202ENST00000487215 AGAP5A6NIR3 686 aa16.88■□□□□ 0.29
SMPDL3A-202ENST00000487215 AQP7P3A6NL99 342 aa16.88■□□□□ 0.29
SMPDL3A-202ENST00000487215 NR5A2O00482 541 aa16.88■□□□□ 0.29
SMPDL3A-202ENST00000487215 FAAHO00519 579 aa16.88■□□□□ 0.29
SMPDL3A-202ENST00000487215 LILRA1O75019 489 aa16.88■□□□□ 0.29
SMPDL3A-202ENST00000487215 KRT33AO76009 404 aa16.88■□□□□ 0.29
SMPDL3A-202ENST00000487215 GPIP06744 558 aa16.88■□□□□ 0.29
SMPDL3A-202ENST00000487215 TACSTD2P09758 323 aa16.88■□□□□ 0.29
SMPDL3A-202ENST00000487215 CECR9P0C854 216 aa16.88■□□□□ 0.29
SMPDL3A-202ENST00000487215 APEX1P27695 318 aaKnown RBP16.88■□□□□ 0.29
SMPDL3A-202ENST00000487215 CALCRP30988 508 aa16.88■□□□□ 0.29
SMPDL3A-202ENST00000487215 SRP14P37108 136 aaKnown RBP16.88■□□□□ 0.29
SMPDL3A-202ENST00000487215 UBE2NP61088 152 aaKnown RBP16.88■□□□□ 0.29
SMPDL3A-202ENST00000487215 TUBA1BP68363 451 aa16.88■□□□□ 0.29
SMPDL3A-202ENST00000487215 TUBA4AP68366 448 aa16.88■□□□□ 0.29
SMPDL3A-202ENST00000487215 ANKRD16Q6P6B7 361 aa16.88■□□□□ 0.29
SMPDL3A-202ENST00000487215 TUBA1AQ71U36 451 aa16.88■□□□□ 0.29
SMPDL3A-202ENST00000487215 GPAT4Q86UL3 456 aa16.88■□□□□ 0.29
SMPDL3A-202ENST00000487215 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.88■□□□□ 0.29
SMPDL3A-202ENST00000487215 ANKFN1Q8N957 763 aa16.88■□□□□ 0.29
SMPDL3A-202ENST00000487215 BCL2L2Q92843 193 aaPredicted RBP16.88■□□□□ 0.29
SMPDL3A-202ENST00000487215 SLC38A1Q9H2H9 487 aa16.88■□□□□ 0.29
SMPDL3A-202ENST00000487215 PIF1Q9H611 641 aa16.88■□□□□ 0.29
SMPDL3A-202ENST00000487215 LGALS13Q9UHV8 139 aa16.88■□□□□ 0.29
SMPDL3A-202ENST00000487215 ARPC4-TTLL3A0A0A6YYG9 625 aa16.87■□□□□ 0.29
SMPDL3A-202ENST00000487215 ZNF587BE7ETH6 402 aa16.87■□□□□ 0.29
SMPDL3A-202ENST00000487215 HMGN4O00479 90 aa16.87■□□□□ 0.29
SMPDL3A-202ENST00000487215 SPAG7O75391 227 aa16.87■□□□□ 0.29
SMPDL3A-202ENST00000487215 CHRM4P08173 479 aa16.87■□□□□ 0.29
SMPDL3A-202ENST00000487215 DAOP14920 347 aa16.87■□□□□ 0.29
SMPDL3A-202ENST00000487215 PAX7P23759 505 aa16.87■□□□□ 0.29
SMPDL3A-202ENST00000487215 CHI3L1P36222 383 aaPredicted RBP16.87■□□□□ 0.29
SMPDL3A-202ENST00000487215 SELENOPP49908 381 aa16.87■□□□□ 0.29
SMPDL3A-202ENST00000487215 EPS8Q12929 822 aa16.87■□□□□ 0.29
SMPDL3A-202ENST00000487215 SYPL1Q16563 259 aa16.87■□□□□ 0.29
SMPDL3A-202ENST00000487215 SMU1Q2TAY7 513 aa16.87■□□□□ 0.29
SMPDL3A-202ENST00000487215 C3orf36Q3SXR2 165 aa16.87■□□□□ 0.29
SMPDL3A-202ENST00000487215 ANXA8L1Q5VT79 327 aa16.87■□□□□ 0.29
SMPDL3A-202ENST00000487215 LINGO2Q7L985 606 aa16.87■□□□□ 0.29
SMPDL3A-202ENST00000487215 LINC01356Q8N9X3 169 aa16.87■□□□□ 0.29
SMPDL3A-202ENST00000487215 TCP10LQ8TDR4 215 aa16.87■□□□□ 0.29
SMPDL3A-202ENST00000487215 WDR60Q8WVS4 1066 aa16.87■□□□□ 0.29
SMPDL3A-202ENST00000487215 HPS1Q92902 700 aa16.87■□□□□ 0.29
SMPDL3A-202ENST00000487215 PPP1R36Q96LQ0 422 aa16.87■□□□□ 0.29
SMPDL3A-202ENST00000487215 SNX18Q96RF0 628 aa16.87■□□□□ 0.29
SMPDL3A-202ENST00000487215 SLC35A5Q9BS91 424 aa16.87■□□□□ 0.29
SMPDL3A-202ENST00000487215 DPY30Q9C005 99 aa16.87■□□□□ 0.29
SMPDL3A-202ENST00000487215 ADAM19Q9H013 955 aa16.87■□□□□ 0.29
SMPDL3A-202ENST00000487215 NELFAQ9H3P2 528 aa16.87■□□□□ 0.29
SMPDL3A-202ENST00000487215 A0A096LPE4 126 aa16.86■□□□□ 0.29
SMPDL3A-202ENST00000487215 A0A1W2PPZ6 126 aa16.86■□□□□ 0.29
SMPDL3A-202ENST00000487215 CFAP73A6NFT4 308 aa16.86■□□□□ 0.29
SMPDL3A-202ENST00000487215 hCG_2039718K7EN88 272 aa16.86■□□□□ 0.29
SMPDL3A-202ENST00000487215 WIPF1O43516 503 aa16.86■□□□□ 0.29
SMPDL3A-202ENST00000487215 IGLV1-44P01699 117 aa16.86■□□□□ 0.29
SMPDL3A-202ENST00000487215 RPS4Y1P22090 263 aaKnown RBP16.86■□□□□ 0.29
SMPDL3A-202ENST00000487215 P2RY4P51582 365 aa16.86■□□□□ 0.29
SMPDL3A-202ENST00000487215 CDH15P55291 814 aa16.86■□□□□ 0.29
SMPDL3A-202ENST00000487215 HGFACQ04756 655 aa16.86■□□□□ 0.29
SMPDL3A-202ENST00000487215 CASP8Q14790 479 aa16.86■□□□□ 0.29
SMPDL3A-202ENST00000487215 MRPL2Q5T653 305 aaKnown RBP16.86■□□□□ 0.29
SMPDL3A-202ENST00000487215 ZCCHC24Q8N2G6 241 aaKnown RBP16.86■□□□□ 0.29
SMPDL3A-202ENST00000487215 VPS37AQ8NEZ2 397 aa16.86■□□□□ 0.29
SMPDL3A-202ENST00000487215 NUP37Q8NFH4 326 aa16.86■□□□□ 0.29
SMPDL3A-202ENST00000487215 OR4F15Q8NGB8 312 aa16.86■□□□□ 0.29
SMPDL3A-202ENST00000487215 MAGEE2Q8TD90 523 aaPredicted RBP16.86■□□□□ 0.29
SMPDL3A-202ENST00000487215 NEU4Q8WWR8 484 aaPredicted RBP16.86■□□□□ 0.29
SMPDL3A-202ENST00000487215 ZNF317Q96PQ6 595 aaPredicted RBP16.86■□□□□ 0.29
SMPDL3A-202ENST00000487215 TRNT1Q96Q11 434 aaKnown RBP16.86■□□□□ 0.29
SMPDL3A-202ENST00000487215 PLA2G12AQ9BZM1 189 aa16.86■□□□□ 0.29
SMPDL3A-202ENST00000487215 ZNF442Q9H7R0 627 aa16.86■□□□□ 0.29
SMPDL3A-202ENST00000487215 AKTIPQ9H8T0 292 aa16.86■□□□□ 0.29
SMPDL3A-202ENST00000487215 FBXO9Q9UK97 447 aaPredicted RBP16.86■□□□□ 0.29
SMPDL3A-202ENST00000487215 UPK3AO75631 287 aa16.85■□□□□ 0.29
SMPDL3A-202ENST00000487215 SNUPNO95149 360 aaKnown RBP16.85■□□□□ 0.29
SMPDL3A-202ENST00000487215 UQCRBP14927 111 aa16.85■□□□□ 0.29
SMPDL3A-202ENST00000487215 CXCR1P25024 350 aa16.85■□□□□ 0.29
SMPDL3A-202ENST00000487215 PDCD2Q16342 344 aaPredicted RBP16.85■□□□□ 0.29
SMPDL3A-202ENST00000487215 SPANXN4Q5MJ08 99 aa16.85■□□□□ 0.29
SMPDL3A-202ENST00000487215 TMEM225Q6GV28 225 aa16.85■□□□□ 0.29
SMPDL3A-202ENST00000487215 C12orf54Q6X4T0 127 aa16.85■□□□□ 0.29
SMPDL3A-202ENST00000487215 CREB3L2Q70SY1 520 aa16.85■□□□□ 0.29
SMPDL3A-202ENST00000487215 RNF130Q86XS8 419 aa16.85■□□□□ 0.29
SMPDL3A-202ENST00000487215 ZNF786Q8N393 782 aa16.85■□□□□ 0.29
SMPDL3A-202ENST00000487215 SVOPLQ8N434 492 aa16.85■□□□□ 0.29
SMPDL3A-202ENST00000487215 TESCQ96BS2 214 aa16.85■□□□□ 0.29
SMPDL3A-202ENST00000487215 ZIM3Q96PE6 472 aa16.85■□□□□ 0.29
SMPDL3A-202ENST00000487215 DOK1Q99704 481 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms