RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 TUBA1BP68363 451 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 TUBA4AP68366 448 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 HGFACQ04756 655 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 ZNF141Q15928 474 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 ARMCX4Q5H9R4 360 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 SAXO2Q658L1 398 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 C1orf229Q6ZS94 237 aaPredicted RBP6.58□□□□□ -1.36
PDPN-205ENST00000487038 TUBA1AQ71U36 451 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 GPAT4Q86UL3 456 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 TMEM151AQ8N4L1 468 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 SYT14Q8NB59 555 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 OR9K2Q8NGE7 335 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 C22orf15Q8WYQ4 148 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 OR7D2Q96RA2 312 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 SDF2Q99470 211 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 NAPGQ99747 312 aaPredicted RBP6.58□□□□□ -1.36
PDPN-205ENST00000487038 PKP2Q99959 881 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 OR11A1Q9GZK7 315 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 MMP27Q9H306 513 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 C7orf69Q9H7B7 122 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 NOX3Q9HBY0 568 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 CRLF2Q9HC73 371 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 EXOSC3Q9NQT5 275 aaKnown RBP6.58□□□□□ -1.36
PDPN-205ENST00000487038 SIRT3Q9NTG7 399 aaPredicted RBP6.58□□□□□ -1.36
PDPN-205ENST00000487038 EXD2Q9NVH0 621 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 ATAD3AQ9NVI7 634 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 ZNF180Q9UJW8 692 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 ZNF346Q9UL40 294 aaKnown RBP6.58□□□□□ -1.36
PDPN-205ENST00000487038 TENM3Q9P273 2699 aa6.58□□□□□ -1.36
PDPN-205ENST00000487038 A0A096LPE4 126 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 TMED7-TICAM2A0A0A6YYA0 188 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 A0A1W2PPW3 197 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 A0A1W2PPZ6 126 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 TMEM114B3SHH9 223 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 NPIPB8E9PQR5 432 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 M0QZ24 198 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 NR5A2O00482 541 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 TIMM23O14925 209 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 SCAMP2O15127 329 aaKnown RBP6.57□□□□□ -1.36
PDPN-205ENST00000487038 PLPP2O43688 288 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 VAMP5O95183 116 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 AGR2O95994 175 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 HPXP02790 462 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 RNASE1P07998 156 aaKnown RBP6.57□□□□□ -1.36
PDPN-205ENST00000487038 IGFBP1P08833 259 aaPredicted RBP6.57□□□□□ -1.36
PDPN-205ENST00000487038 UROSP10746 265 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 CCNA2P20248 432 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 COL8A2P25067 703 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 MAPK1P28482 360 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 RYKP34925 604 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 SOAT1P35610 550 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 PGM1P36871 562 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 POLR2HP52434 150 aaKnown RBP6.57□□□□□ -1.36
PDPN-205ENST00000487038 LMO4P61968 165 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 HPCAP84074 193 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 GALK2Q01415 458 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 TEKQ02763 1124 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 BAMBIQ13145 260 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 KIAA0040Q15053 153 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 LSM12Q3MHD2 195 aaKnown RBP6.57□□□□□ -1.36
PDPN-205ENST00000487038 GKAP1Q5VSY0 366 aaPredicted RBP6.57□□□□□ -1.36
PDPN-205ENST00000487038 TMEM225Q6GV28 225 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 NIPAL3Q6P499 406 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 C17orf107Q6ZR85 190 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 DOK3Q7L591 496 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 C16orf62Q7Z3J2 963 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 RETREG3Q86VR2 466 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 CARM1Q86X55 608 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 HOMEZQ8IX15 550 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 CCDC36Q8IYA8 594 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 ARFGAP2Q8N6H7 521 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 CCNYL1Q8N7R7 359 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 SIGLECL1Q8N7X8 197 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 FAM71CQ8NEG0 241 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 ANKK1Q8NFD2 765 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 OR5D16Q8NGK9 328 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 CLHC1Q8NHS4 586 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 PSMA8Q8TAA3 256 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 RNF217Q8TC41 542 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 MGARPQ8TDB4 240 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 OR5P2Q8WZ92 322 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 BCL2L2Q92843 193 aaPredicted RBP6.57□□□□□ -1.36
PDPN-205ENST00000487038 POP5Q969H6 163 aaKnown RBP6.57□□□□□ -1.36
PDPN-205ENST00000487038 UBE2FQ969M7 185 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 FCRL1Q96LA6 429 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 ZNF385AQ96PM9 386 aaKnown RBP6.57□□□□□ -1.36
PDPN-205ENST00000487038 TAPBPLQ9BX59 468 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 MRPL37Q9BZE1 423 aaKnown RBP6.57□□□□□ -1.36
PDPN-205ENST00000487038 LINC00470Q9BZP3 86 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 GSTO2Q9H4Y5 243 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 SEC61A2Q9H9S3 476 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 GPATCH2Q9NW75 528 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 TMEM216Q9P0N5 145 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 GPR160Q9UJ42 338 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 MKLN1Q9UL63 735 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 TMED7Q9Y3B3 224 aa6.57□□□□□ -1.36
PDPN-205ENST00000487038 A0A1B0GUS0 222 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 AQP7P3A6NL99 342 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 CLDN25C9JDP6 229 aa6.56□□□□□ -1.36
PDPN-205ENST00000487038 POC1B-GALNT4F8VUJ3 575 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms