RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 SH2D2AQ9NP31 389 aa10.56□□□□□ -0.72
PRKCB-207ENST00000486868 PPP4R1LQ9P1A2 415 aa10.56□□□□□ -0.72
PRKCB-207ENST00000486868 NCDNQ9UBB6 729 aa10.56□□□□□ -0.72
PRKCB-207ENST00000486868 TNFRSF10DQ9UBN6 386 aa10.56□□□□□ -0.72
PRKCB-207ENST00000486868 CAB39Q9Y376 341 aaPredicted RBP10.56□□□□□ -0.72
PRKCB-207ENST00000486868 PCDHGB7Q9Y5F8 929 aa10.56□□□□□ -0.72
PRKCB-207ENST00000486868 CORINQ9Y5Q5 1042 aa10.56□□□□□ -0.72
PRKCB-207ENST00000486868 IER3IP1Q9Y5U9 82 aa10.56□□□□□ -0.72
PRKCB-207ENST00000486868 A3GALT2U3KPV4 340 aa10.56□□□□□ -0.72
PRKCB-207ENST00000486868 TMEM72A0PK05 275 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.55□□□□□ -0.72
PRKCB-207ENST00000486868 FAM47E-STBD1D6RA91 191 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 MCIDASD6RGH6 385 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 AIREO43918 545 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 ITGA10O75578 1167 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 DXOO77932 396 aaKnown RBP10.55□□□□□ -0.72
PRKCB-207ENST00000486868 AHSA1O95433 338 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 IGHMP01871 453 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 SERPINA7P05543 415 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 LIMS3P0CW19 117 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 LIMS4P0CW20 117 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 GAAP10253 952 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 CPEP16870 476 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 CD53P19397 219 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 SDHAP31040 664 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 RPL4P36578 427 aaKnown RBP10.55□□□□□ -0.72
PRKCB-207ENST00000486868 NBL1P41271 181 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 EIF1P41567 113 aaKnown RBP10.55□□□□□ -0.72
PRKCB-207ENST00000486868 CENPAP49450 140 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 SSR4P51571 173 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 ACTC1P68032 377 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 ACTA1P68133 377 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 ZP4Q12836 540 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 AQP6Q13520 282 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 DNASE1L3Q13609 305 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 CRMP1Q14194 572 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 ALG10Q5BKT4 473 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 HES3Q5TGS1 186 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 C1orf140Q5VVS0 124 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 C16orf47Q6ZP98 133 aaPredicted RBP10.55□□□□□ -0.72
PRKCB-207ENST00000486868 USP43Q70EL4 1123 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 NANOGNBQ7Z5D8 188 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 ATCAYQ86WG3 371 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 LRRC17Q8N6Y2 441 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 POMGNT2Q8NAT1 580 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 NPEPL1Q8NDH3 523 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 NLGN4YQ8NFZ3 816 aaPredicted RBP10.55□□□□□ -0.72
PRKCB-207ENST00000486868 OR5J2Q8NH18 312 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 MFSD8Q8NHS3 518 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 PAQR8Q8TEZ7 354 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 THAP3Q8WTV1 239 aaPredicted RBP10.55□□□□□ -0.72
PRKCB-207ENST00000486868 KISS1RQ969F8 398 aaPredicted RBP10.55□□□□□ -0.72
PRKCB-207ENST00000486868 TAAR8Q969N4 342 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 KTI12Q96EK9 354 aaPredicted RBP10.55□□□□□ -0.72
PRKCB-207ENST00000486868 ARHGAP9Q9BRR9 750 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 PTDSS2Q9BVG9 487 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 ANGPTL4Q9BY76 406 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 METTL7AQ9H8H3 244 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 PARD6AQ9NPB6 346 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 FANCFQ9NPI8 374 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 ERVK13-1Q9NX77 482 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 MRPL39Q9NYK5 338 aaKnown RBP10.55□□□□□ -0.72
PRKCB-207ENST00000486868 KLRF1Q9NZS2 232 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 IL20RAQ9UHF4 553 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 CLEC2DQ9UHP7 191 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 MOKQ9UQ07 419 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 NOX1Q9Y5S8 564 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 SPIN1Q9Y657 262 aaPredicted RBP10.55□□□□□ -0.72
PRKCB-207ENST00000486868 CHCHD2Q9Y6H1 151 aaPredicted RBP10.55□□□□□ -0.72
PRKCB-207ENST00000486868 BDP1A6H8Y1 2624 aa10.55□□□□□ -0.72
PRKCB-207ENST00000486868 TEX51A0A1B0GUA7 166 aa10.54□□□□□ -0.72
PRKCB-207ENST00000486868 A0A1W2PNU3 283 aaPredicted RBP10.54□□□□□ -0.72
PRKCB-207ENST00000486868 FTCDNL1E5RQL4 147 aa10.54□□□□□ -0.72
PRKCB-207ENST00000486868 GNB5O14775 395 aa10.54□□□□□ -0.72
PRKCB-207ENST00000486868 SBK2P0C263 348 aa10.54□□□□□ -0.72
PRKCB-207ENST00000486868 HIST1H1CP16403 213 aaKnown RBP10.54□□□□□ -0.72
PRKCB-207ENST00000486868 PTNP21246 168 aa10.54□□□□□ -0.72
PRKCB-207ENST00000486868 GALP22466 123 aa10.54□□□□□ -0.72
PRKCB-207ENST00000486868 PSMA1P25786 263 aaKnown RBP10.54□□□□□ -0.72
PRKCB-207ENST00000486868 IDUAP35475 653 aa10.54□□□□□ -0.72
PRKCB-207ENST00000486868 ATP6V1E1P36543 226 aa10.54□□□□□ -0.72
PRKCB-207ENST00000486868 AQP2P41181 271 aa10.54□□□□□ -0.72
PRKCB-207ENST00000486868 SOX3P41225 446 aa10.54□□□□□ -0.72
PRKCB-207ENST00000486868 SERPINB10P48595 397 aa10.54□□□□□ -0.72
PRKCB-207ENST00000486868 ETV1P50549 477 aa10.54□□□□□ -0.72
PRKCB-207ENST00000486868 MLLT10P55197 1068 aa10.54□□□□□ -0.72
PRKCB-207ENST00000486868 TCF15Q12870 199 aa10.54□□□□□ -0.72
PRKCB-207ENST00000486868 SPCS2Q15005 226 aa10.54□□□□□ -0.72
PRKCB-207ENST00000486868 DGUOKQ16854 277 aa10.54□□□□□ -0.72
PRKCB-207ENST00000486868 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.54□□□□□ -0.725e-7■□□□□ 8.1
PRKCB-207ENST00000486868 SLC35F1Q5T1Q4 408 aa10.54□□□□□ -0.72
PRKCB-207ENST00000486868 STPG1Q5TH74 334 aa10.54□□□□□ -0.72
PRKCB-207ENST00000486868 IGF2-ASQ6U949 168 aa10.54□□□□□ -0.72
PRKCB-207ENST00000486868 TMPRSS11AQ6ZMR5 421 aa10.54□□□□□ -0.72
PRKCB-207ENST00000486868 ADCK1Q86TW2 530 aa10.54□□□□□ -0.72
PRKCB-207ENST00000486868 RAB43Q86YS6 212 aa10.54□□□□□ -0.72
PRKCB-207ENST00000486868 KLHL36Q8N4N3 616 aa10.54□□□□□ -0.72
PRKCB-207ENST00000486868 C10orf53Q8N6V4 93 aa10.54□□□□□ -0.72
PRKCB-207ENST00000486868 FAM98AQ8NCA5 519 aaKnown RBP10.54□□□□□ -0.72
PRKCB-207ENST00000486868 ADPRHL1Q8NDY3 354 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms