RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 ZNF619Q8N2I2 560 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 COX18Q8N8Q8 333 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 WDSUB1Q8N9V3 476 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 SLC16A11Q8NCK7 471 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 FAM83FQ8NEG4 500 aaPredicted RBP8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 OR7G1Q8NGA0 311 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 OR52R1Q8NGF1 315 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 IPCEF1Q8WWN9 437 aaPredicted RBP8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 SLC9A6Q92581 669 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 CDS1Q92903 461 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 OMA1Q96E52 524 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 YIPF4Q9BSR8 244 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 FUZQ9BT04 418 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 G6PC3Q9BUM1 346 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 PRDM14Q9GZV8 571 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 CLEC4MQ9H2X3 399 aaPredicted RBP8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 EQTNQ9NQ60 294 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 PRODH2Q9UF12 536 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 CFL2Q9Y281 166 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 CCDC168Q8NDH2 2452 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 PCNX3Q9H6A9 2034 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 ANKHD1Q8IWZ3 2542 aaKnown RBP8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 HRNRQ86YZ3 2850 aaPredicted RBP8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 DOCK7Q96N67 2140 aa8.47□□□□□ -1.05
TMEM39A-208ENST00000486159 SH3PXD2BA1X283 911 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 A6NNC1 897 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 HSPB2A8KAH6 182 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 AHRRA9YTQ3 701 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 AP3D1O14617 1153 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 TP53I11O14683 189 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 FFAR1O14842 300 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 KIAA0513O60268 411 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 MITFO75030 526 aaPredicted RBP8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 ICOSLGO75144 302 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 PPM1BO75688 479 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 OR5F1O95221 314 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 CLIC3O95833 236 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 CD99P14209 185 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 HOXB4P17483 251 aaPredicted RBP8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 LCN1P31025 176 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 GGT2P36268 569 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 CLK3P49761 638 aaKnown RBP8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 EMDP50402 254 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 ASCL1P50553 236 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 UGT2B15P54855 530 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 IL5RAQ01344 420 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 IL1RL1Q01638 556 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 SRYQ05066 204 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 CD47Q08722 323 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 ST3GAL3Q11203 375 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 FOXD4Q12950 439 aaPredicted RBP8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 TRAM2Q15035 370 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 HSPB2Q16082 182 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 DUSP5Q16690 384 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 LINC01559Q495D7 138 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 ZBED5Q49AG3 693 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 DCST2Q5T1A1 773 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 RNF220Q5VTB9 566 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 NSUN5P2Q63ZY6 315 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 TIGD3Q6B0B8 471 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 TYW3Q6IPR3 259 aaKnown RBP8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 DEF8Q6ZN54 512 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 FRRS1Q6ZNA5 592 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 GALNT5Q7Z7M9 940 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 RANBP3LQ86VV4 465 aaPredicted RBP8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 OR4N2Q8NGD1 307 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 RNASE6Q93091 150 aaKnown RBP8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 SLC38A4Q969I6 547 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 ABTB1Q969K4 478 aaPredicted RBP8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 TMEM41AQ96HV5 264 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 SMR3AQ99954 134 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 CXXC4Q9H2H0 198 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 CXorf56Q9H5V9 222 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 KRCC1Q9NPI7 259 aaPredicted RBP8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 PLCXD1Q9NUJ7 323 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 QPCTLQ9NXS2 382 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 FLRT3Q9NZU0 649 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 FBXL2Q9UKC9 423 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 A4GNTQ9UNA3 340 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 ZNF443Q9Y2A4 671 aaPredicted RBP8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 PCDHGB1Q9Y5G3 927 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 KCNE3Q9Y6H6 103 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 NBEAL1Q6ZS30 2694 aa8.46□□□□□ -1.06
TMEM39A-208ENST00000486159 SH3D21A4FU49 640 aa8.45□□□□□ -1.06
TMEM39A-208ENST00000486159 EEF1E1-BLOC1S5C9J1V9 151 aa8.45□□□□□ -1.06
TMEM39A-208ENST00000486159 J3KTA2 159 aa8.45□□□□□ -1.06
TMEM39A-208ENST00000486159 DVL2O14641 736 aa8.45□□□□□ -1.06
TMEM39A-208ENST00000486159 EEF1E1O43324 174 aaKnown RBP8.45□□□□□ -1.06
TMEM39A-208ENST00000486159 SNX4O95219 450 aa8.45□□□□□ -1.06
TMEM39A-208ENST00000486159 ANGPTL1O95841 491 aa8.45□□□□□ -1.06
TMEM39A-208ENST00000486159 IL2RAP01589 272 aa8.45□□□□□ -1.06
TMEM39A-208ENST00000486159 OSMP13725 252 aa8.45□□□□□ -1.06
TMEM39A-208ENST00000486159 NID1P14543 1247 aa8.45□□□□□ -1.06
TMEM39A-208ENST00000486159 IL7RP16871 459 aa8.45□□□□□ -1.06
TMEM39A-208ENST00000486159 KLK2P20151 261 aa8.45□□□□□ -1.06
TMEM39A-208ENST00000486159 EEF1B2P24534 225 aaKnown RBP8.45□□□□□ -1.06
TMEM39A-208ENST00000486159 TIMP3P35625 211 aa8.45□□□□□ -1.06
TMEM39A-208ENST00000486159 YAP1P46937 504 aaKnown RBP8.45□□□□□ -1.06
TMEM39A-208ENST00000486159 RGS8P57771 180 aaPredicted RBP8.45□□□□□ -1.06
TMEM39A-208ENST00000486159 CDC42P60953 191 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms