RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 AURKCQ9UQB9 309 aa17.8■□□□□ 0.44
COL6A2-208ENST00000485591 UBR5O95071 2799 aaPredicted RBP17.8■□□□□ 0.44
COL6A2-208ENST00000485591 IGHV3-15A0A0B4J1V0 119 aa17.79■□□□□ 0.44
COL6A2-208ENST00000485591 A0A0G2JNJ9 132 aa17.79■□□□□ 0.44
COL6A2-208ENST00000485591 HSPB2A8KAH6 182 aa17.79■□□□□ 0.44
COL6A2-208ENST00000485591 KPNA4O00629 521 aaPredicted RBP17.79■□□□□ 0.44
COL6A2-208ENST00000485591 CYTIPO60759 359 aa17.79■□□□□ 0.44
COL6A2-208ENST00000485591 BGLAPP02818 100 aa17.79■□□□□ 0.44
COL6A2-208ENST00000485591 MT-ND1P03886 318 aa17.79■□□□□ 0.44
COL6A2-208ENST00000485591 KLK2P20151 261 aa17.79■□□□□ 0.44
COL6A2-208ENST00000485591 SMIM11AP58511 58 aa17.79■□□□□ 0.44
COL6A2-208ENST00000485591 SPIBQ01892 262 aa17.79■□□□□ 0.44
COL6A2-208ENST00000485591 SRSF1Q07955 248 aaKnown RBP eCLIP17.79■□□□□ 0.44
COL6A2-208ENST00000485591 MFSD13AQ14CX5 517 aa17.79■□□□□ 0.44
COL6A2-208ENST00000485591 RNPS1Q15287 305 aaKnown RBP17.79■□□□□ 0.44
COL6A2-208ENST00000485591 HSPB2Q16082 182 aa17.79■□□□□ 0.44
COL6A2-208ENST00000485591 NAXEQ8NCW5 288 aa17.79■□□□□ 0.44
COL6A2-208ENST00000485591 ACOT11Q8WXI4 607 aaPredicted RBP17.79■□□□□ 0.44
COL6A2-208ENST00000485591 SLC25A36Q96CQ1 311 aa17.79■□□□□ 0.44
COL6A2-208ENST00000485591 RSRC1Q96IZ7 334 aaKnown RBP17.79■□□□□ 0.44
COL6A2-208ENST00000485591 NAA11Q9BSU3 229 aaPredicted RBP17.79■□□□□ 0.44
COL6A2-208ENST00000485591 GLRX2Q9NS18 164 aa17.79■□□□□ 0.44
COL6A2-208ENST00000485591 Q9UFV3 132 aa17.79■□□□□ 0.44
COL6A2-208ENST00000485591 MED31Q9Y3C7 131 aa17.79■□□□□ 0.44
COL6A2-208ENST00000485591 TESMINQ9Y4I5 508 aa17.79■□□□□ 0.44
COL6A2-208ENST00000485591 RELNP78509 3460 aa17.78■□□□□ 0.44
COL6A2-208ENST00000485591 AGFG2O95081 481 aa17.78■□□□□ 0.44
COL6A2-208ENST00000485591 GADD45GO95257 159 aa17.78■□□□□ 0.44
COL6A2-208ENST00000485591 MT-ATP6P00846 226 aa17.78■□□□□ 0.44
COL6A2-208ENST00000485591 LDLRP01130 860 aa17.78■□□□□ 0.44
COL6A2-208ENST00000485591 CRHP06850 196 aa17.78■□□□□ 0.44
COL6A2-208ENST00000485591 TMIGD3P0DMS9 266 aaPredicted RBP17.78■□□□□ 0.44
COL6A2-208ENST00000485591 GTF2E2P29084 291 aaKnown RBP17.78■□□□□ 0.44
COL6A2-208ENST00000485591 RRM2P31350 389 aa17.78■□□□□ 0.44
COL6A2-208ENST00000485591 ERFP50548 548 aa17.78■□□□□ 0.44
COL6A2-208ENST00000485591 SMSP52788 366 aa17.78■□□□□ 0.44
COL6A2-208ENST00000485591 FOXD4Q12950 439 aaPredicted RBP17.78■□□□□ 0.44
COL6A2-208ENST00000485591 CCNIQ14094 377 aa17.78■□□□□ 0.44
COL6A2-208ENST00000485591 ZNF74Q16587 644 aa17.78■□□□□ 0.44
COL6A2-208ENST00000485591 GTF2IRD2BQ6EKJ0 949 aa17.78■□□□□ 0.44
COL6A2-208ENST00000485591 GTF2IRD2Q86UP8 949 aa17.78■□□□□ 0.44
COL6A2-208ENST00000485591 RNF113BQ8IZP6 322 aaKnown RBP17.78■□□□□ 0.44
COL6A2-208ENST00000485591 GCNT2Q8N0V5 402 aa17.78■□□□□ 0.44
COL6A2-208ENST00000485591 FAM26EQ8N5C1 309 aa17.78■□□□□ 0.44
COL6A2-208ENST00000485591 PAPD5Q8NDF8 572 aaKnown RBP17.78■□□□□ 0.44
COL6A2-208ENST00000485591 PFN4Q8NHR9 129 aa17.78■□□□□ 0.44
COL6A2-208ENST00000485591 PIGXQ8TBF5 258 aa17.78■□□□□ 0.44
COL6A2-208ENST00000485591 SLC7A13Q8TCU3 470 aa17.78■□□□□ 0.44
COL6A2-208ENST00000485591 ABHD3Q8WU67 409 aa17.78■□□□□ 0.44
COL6A2-208ENST00000485591 GMPPAQ96IJ6 420 aaPredicted RBP17.78■□□□□ 0.44
COL6A2-208ENST00000485591 MOGAT1Q96PD6 335 aa17.78■□□□□ 0.44
COL6A2-208ENST00000485591 CHID1Q9BWS9 393 aa17.78■□□□□ 0.44
COL6A2-208ENST00000485591 GP6Q9HCN6 339 aa17.78■□□□□ 0.44
COL6A2-208ENST00000485591 CCM2LQ9NUG4 571 aaPredicted RBP17.78■□□□□ 0.44
COL6A2-208ENST00000485591 COQ3Q9NZJ6 369 aa17.78■□□□□ 0.44
COL6A2-208ENST00000485591 RNF6Q9Y252 685 aa17.78■□□□□ 0.44
COL6A2-208ENST00000485591 A0A087WUU8 490 aa17.77■□□□□ 0.44
COL6A2-208ENST00000485591 HTR3EA5X5Y0 456 aa17.77■□□□□ 0.44
COL6A2-208ENST00000485591 AQP7P3A6NL99 342 aa17.77■□□□□ 0.44
COL6A2-208ENST00000485591 ENO4A6NNW6 628 aa17.77■□□□□ 0.44
COL6A2-208ENST00000485591 ZNF814B7Z6K7 855 aa17.77■□□□□ 0.44
COL6A2-208ENST00000485591 ZG16O60844 167 aa17.77■□□□□ 0.44
COL6A2-208ENST00000485591 SS18L1O75177 396 aaPredicted RBP17.77■□□□□ 0.44
COL6A2-208ENST00000485591 AKR7A3O95154 331 aa17.77■□□□□ 0.44
COL6A2-208ENST00000485591 NQO1P15559 274 aaKnown RBP17.77■□□□□ 0.44
COL6A2-208ENST00000485591 GRPRP30550 384 aa17.77■□□□□ 0.44
COL6A2-208ENST00000485591 LTBQ06643 244 aa17.77■□□□□ 0.44
COL6A2-208ENST00000485591 PDK3Q15120 406 aa17.77■□□□□ 0.44
COL6A2-208ENST00000485591 GUSBP1Q15486 140 aa17.77■□□□□ 0.44
COL6A2-208ENST00000485591 FGD3Q5JSP0 725 aa17.77■□□□□ 0.44
COL6A2-208ENST00000485591 OTUD3Q5T2D3 398 aaPredicted RBP17.77■□□□□ 0.44
COL6A2-208ENST00000485591 MBOAT2Q6ZWT7 520 aa17.77■□□□□ 0.44
COL6A2-208ENST00000485591 MCEMP1Q8IX19 187 aa17.77■□□□□ 0.44
COL6A2-208ENST00000485591 TMEM99Q8N816 258 aa17.77■□□□□ 0.44
COL6A2-208ENST00000485591 SLCO4A1Q96BD0 722 aa17.77■□□□□ 0.44
COL6A2-208ENST00000485591 INTS12Q96CB8 462 aaKnown RBP17.77■□□□□ 0.44
COL6A2-208ENST00000485591 PSD2Q9BQI7 771 aa17.77■□□□□ 0.44
COL6A2-208ENST00000485591 FUZQ9BT04 418 aa17.77■□□□□ 0.44
COL6A2-208ENST00000485591 YY1AP1Q9H869 796 aa17.77■□□□□ 0.44
COL6A2-208ENST00000485591 FKRPQ9H9S5 495 aa17.77■□□□□ 0.44
COL6A2-208ENST00000485591 KLHL9Q9P2J3 617 aa17.77■□□□□ 0.44
COL6A2-208ENST00000485591 CORINQ9Y5Q5 1042 aa17.77■□□□□ 0.44
COL6A2-208ENST00000485591 DIDO1Q9BTC0 2240 aaKnown RBP17.76■□□□□ 0.43
COL6A2-208ENST00000485591 INTS1Q8N201 2190 aaKnown RBP17.76■□□□□ 0.43
COL6A2-208ENST00000485591 TRBV4-1A0A0J9YWV2 114 aa17.76■□□□□ 0.43
COL6A2-208ENST00000485591 WIPF3A6NGB9 483 aa17.76■□□□□ 0.43
COL6A2-208ENST00000485591 LRRN3E7EW58 273 aa17.76■□□□□ 0.43
COL6A2-208ENST00000485591 PIP5K1CO60331 668 aa17.76■□□□□ 0.43
COL6A2-208ENST00000485591 FKBP6O75344 327 aa17.76■□□□□ 0.43
COL6A2-208ENST00000485591 KRT36O76013 467 aa17.76■□□□□ 0.43
COL6A2-208ENST00000485591 CH25HO95992 272 aa17.76■□□□□ 0.43
COL6A2-208ENST00000485591 PLGP00747 810 aaPredicted RBP17.76■□□□□ 0.43
COL6A2-208ENST00000485591 AGAP20933 346 aa17.76■□□□□ 0.43
COL6A2-208ENST00000485591 CTSSP25774 331 aa17.76■□□□□ 0.43
COL6A2-208ENST00000485591 CHRNB4P30926 498 aa17.76■□□□□ 0.43
COL6A2-208ENST00000485591 P2RY4P51582 365 aa17.76■□□□□ 0.43
COL6A2-208ENST00000485591 ACTR3P61158 418 aa17.76■□□□□ 0.43
COL6A2-208ENST00000485591 FOXF2Q12947 444 aa17.76■□□□□ 0.43
COL6A2-208ENST00000485591 OR2T5Q6IEZ7 315 aa17.76■□□□□ 0.43
COL6A2-208ENST00000485591 PODNL1Q6PEZ8 512 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms