RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 PIGFQ07326 219 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 SNAPC1Q16533 368 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 SMN1Q16637 294 aaKnown RBP6.3□□□□□ -1.4
BRCA1-216ENST00000484087 ALG10BQ5I7T1 473 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 XAF1Q6GPH4 301 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 ULK3Q6PHR2 472 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 FAM180AQ6UWF9 173 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 IL20RBQ6UXL0 311 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 ZAR1Q86SH2 424 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 PRR22Q8IZ63 422 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 CADM2Q8N3J6 435 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 CLDN22Q8N7P3 220 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 TCEANCQ8N8B7 351 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 LSMEM1Q8N8F7 131 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 GALNT11Q8NCW6 608 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 ZNF721Q8TF20 911 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 TMEM255BQ8WV15 326 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 FAR1Q8WVX9 515 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 DNAJA4Q8WW22 397 aaPredicted RBP6.3□□□□□ -1.4
BRCA1-216ENST00000484087 GGHQ92820 318 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 RFKQ969G6 155 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 UBE2FQ969M7 185 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 MUL1Q969V5 352 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 HSPBAP1Q96EW2 488 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 VMP1Q96GC9 406 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 FRMD6Q96NE9 622 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 IL4I1Q96RQ9 567 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 BCL7BQ9BQE9 202 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 UTP23Q9BRU9 249 aaKnown RBP6.3□□□□□ -1.4
BRCA1-216ENST00000484087 ACOT13Q9NPJ3 140 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 DEPPQ9NTK1 212 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 PAK1IP1Q9NWT1 392 aaPredicted RBP6.3□□□□□ -1.4
BRCA1-216ENST00000484087 CNIH4Q9P003 139 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 KCNE5Q9UJ90 142 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 OSGIN2Q9Y236 505 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 DTX4Q9Y2E6 619 aa6.3□□□□□ -1.4
BRCA1-216ENST00000484087 DIDO1Q9BTC0 2240 aaKnown RBP6.3□□□□□ -1.4
BRCA1-216ENST00000484087 A0A0B4J2E0 115 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 A0A1B0GX12 115 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 CLEC18AA5D8T8 446 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 HTR3EA5X5Y0 456 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 UNC119BA6NIH7 251 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 NPIPB9F8W1W9 429 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 TLX2O43763 284 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-216ENST00000484087 IGKV1D-16P01601 117 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 IGKV3-11P04433 115 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 HTR1AP08908 422 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 SAGP10523 405 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-216ENST00000484087 UBL4AP11441 157 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 PIPP12273 146 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-216ENST00000484087 PRG2P13727 222 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 CCNA2P20248 432 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 PCMT1P22061 227 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 COL8A1P27658 744 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 HTR2AP28223 471 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 ADH7P40394 386 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 GPR4P46093 362 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 SLC6A8P48029 635 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 MEOX1P50221 254 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 NUDT6P53370 316 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 RNF4P78317 190 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 PRKCDQ05655 676 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 PLCXD2Q0VAA5 305 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 ST3GAL4Q11206 333 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 EBPQ15125 230 aaKnown RBP6.29□□□□□ -1.4
BRCA1-216ENST00000484087 TBCEQ15813 527 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-216ENST00000484087 KLHL22Q53GT1 634 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 KLHL26Q53HC5 615 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 TMEM201Q5SNT2 666 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 SLC25A30Q5SVS4 291 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 PRAMEF20Q5VT98 475 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 ZNF324BQ6AW86 544 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-216ENST00000484087 CLEC18BQ6UXF7 455 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 C3P1Q6ZMU1 363 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 CCDC103Q8IW40 242 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 SLC34A3Q8N130 599 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 SLC43A2Q8N370 569 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 FAM26EQ8N5C1 309 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 TMCO5AQ8N6Q1 288 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 CLEC18CQ8NCF0 446 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 C17orf47Q8NEP4 570 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 OR2T33Q8NG76 320 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 OR5M3Q8NGP4 307 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 PHOSPHO1Q8TCT1 267 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 CNOT9Q92600 299 aaKnown RBP6.29□□□□□ -1.4
BRCA1-216ENST00000484087 EFHD2Q96C19 240 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-216ENST00000484087 C12orf43Q96C57 262 aaKnown RBP6.29□□□□□ -1.4
BRCA1-216ENST00000484087 BPIFA2Q96DR5 249 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 SCMH1Q96GD3 660 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 RASL10BQ96S79 203 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 SLX1AQ9BQ83 275 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 TSSK6Q9BXA6 273 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 RNF32Q9H0A6 362 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 RACGAP1Q9H0H5 632 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 NXF5Q9H1B4 397 aaKnown RBP6.29□□□□□ -1.4
BRCA1-216ENST00000484087 AMBNQ9NP70 447 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 EXOSC3Q9NQT5 275 aaKnown RBP6.29□□□□□ -1.4
BRCA1-216ENST00000484087 MED17Q9NVC6 651 aa6.29□□□□□ -1.4
BRCA1-216ENST00000484087 CHCHD3Q9NX63 227 aaKnown RBP6.29□□□□□ -1.4
BRCA1-216ENST00000484087 DNAJB12Q9NXW2 375 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms