RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 HOXC5Q00444 222 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 HYAL1Q12794 435 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 ILF3Q12906 894 aaKnown RBP eCLIP4.54□□□□□ -1.68
SF3B6-202ENST00000478050 GPR18Q14330 331 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 KIR2DS5Q14953 304 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 QPRTQ15274 297 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 CARTPTQ16568 116 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 ALG11Q2TAA5 492 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 PRICKLE4Q2TBC4 344 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 ZNF791Q3KP31 576 aaPredicted RBP4.54□□□□□ -1.68
SF3B6-202ENST00000478050 CCDC92Q53HC0 331 aaPredicted RBP4.54□□□□□ -1.68
SF3B6-202ENST00000478050 ZMAT1Q5H9K5 638 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 EOGTQ5NDL2 527 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 GARNL3Q5VVW2 1013 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 MZT2BQ6NZ67 158 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 CNIH2Q6PI25 160 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 SMARCD3Q6STE5 483 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 KIAA1324Q6UXG2 1013 aaKnown RBP4.54□□□□□ -1.68
SF3B6-202ENST00000478050 RPTNQ6XPR3 784 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 KLBQ86Z14 1044 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 GRAMD2AQ8IUY3 354 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 CPOQ8IVL8 374 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 OR4N5Q8IXE1 308 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 GPALPP1Q8IXQ4 340 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 CA13Q8N1Q1 262 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 LNX2Q8N448 690 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 CAMKK1Q8N5S9 505 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 SIRT6Q8N6T7 355 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 ZFP41Q8N8Y5 198 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 SYT14Q8NB59 555 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 RCBTB1Q8NDN9 531 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 C19orf18Q8NEA5 215 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 OR51G2Q8NGK0 314 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 OR6F1Q8NGZ6 308 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 OR10G6Q8NH81 332 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 NEIL3Q8TAT5 605 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 ENKURQ8TC29 256 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 SLC2A12Q8TD20 617 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 HOXB13Q92826 284 aaPredicted RBP4.54□□□□□ -1.68
SF3B6-202ENST00000478050 SLC35B4Q969S0 331 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 OTULINQ96BN8 352 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 ZC3HAV1LQ96H79 300 aaKnown RBP4.54□□□□□ -1.68
SF3B6-202ENST00000478050 AHCYL2Q96HN2 611 aaKnown RBP4.54□□□□□ -1.68
SF3B6-202ENST00000478050 LOXL4Q96JB6 756 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 LRFN5Q96NI6 719 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 FCRL4Q96PJ5 515 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 NEDD4LQ96PU5 975 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 SNX18Q96RF0 628 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 ATF6BQ99941 703 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 SOSTQ9BQB4 213 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 RPP25Q9BUL9 199 aaKnown RBP4.54□□□□□ -1.68
SF3B6-202ENST00000478050 ALG8Q9BVK2 526 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 TMED9Q9BVK6 235 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 GSDMCQ9BYG8 508 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 DPH1Q9BZG8 443 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 TRIM2Q9C040 744 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 TMEM168Q9H0V1 697 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 C8orf33Q9H7E9 229 aaPredicted RBP4.54□□□□□ -1.68
SF3B6-202ENST00000478050 TBC1D17Q9HA65 648 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 NEK6Q9HC98 313 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 ADAP2Q9NPF8 381 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 TRIM36Q9NQ86 728 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 CMC2Q9NRP2 79 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.54□□□□□ -1.68
SF3B6-202ENST00000478050 SIDT1Q9NXL6 827 aaKnown RBP4.54□□□□□ -1.68
SF3B6-202ENST00000478050 MAT2BQ9NZL9 334 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 CPNE7Q9UBL6 633 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 POU2F3Q9UKI9 436 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 MED31Q9Y3C7 131 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 SPEF1Q9Y4P9 236 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 NPFFR2Q9Y5X5 522 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 CSNK1G3Q9Y6M4 447 aa4.54□□□□□ -1.68
SF3B6-202ENST00000478050 HEATR5AQ86XA9 2040 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 EML5Q05BV3 1969 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 CEP192Q8TEP8 1941 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 TRBV23OR9-2A0A075B6M9 112 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 LOC105369274A0A096LPK9 316 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 A0A0B4J2E0 115 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 LOC102723532A0A0G2JNH3 316 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 CENPVL1A0A0U1RR11 272 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 A0A1B0GX12 115 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 DAPL1A0PJW8 107 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 FAM172BPA6NC97 362 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 ZNF860A6NHJ4 632 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 CD8B2A6NJW9 211 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 TTC36A6NLP5 189 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 RIIAD1A6NNX1 92 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 CENPXA8MT69 81 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 B4DXG7 233 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 PRR23D1E9PI22 279 aaPredicted RBP4.53□□□□□ -1.68
SF3B6-202ENST00000478050 PRAMEF26H0Y7S4 382 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 SGK494L7N484 410 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 CYR61O00622 381 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 CDC42EP2O14613 210 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 NARSO43776 548 aaKnown RBP4.53□□□□□ -1.68
SF3B6-202ENST00000478050 FGF17O60258 216 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 HPGDSO60760 199 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 LDB3O75112 727 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 SLC2A10O95528 541 aa4.53□□□□□ -1.68
SF3B6-202ENST00000478050 NTN1O95631 604 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms