RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 PCDHA13Q9Y5I0 950 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 ADH1BP00325 375 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 IFNA17P01571 189 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 FTLP02792 175 aaPredicted RBP4.47□□□□□ -1.69
NPHP3-206ENST00000474871 THBS1P07996 1170 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 ALDOCP09972 364 aaKnown RBP4.47□□□□□ -1.69
NPHP3-206ENST00000474871 SSTR1P30872 391 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 AKT2P31751 481 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 OTX2P32243 289 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 RPS15P62841 145 aaKnown RBP4.47□□□□□ -1.69
NPHP3-206ENST00000474871 KEAP1Q14145 624 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 NSDHLQ15738 373 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 ASTE1Q2TB18 679 aaPredicted RBP4.47□□□□□ -1.69
NPHP3-206ENST00000474871 FAM198BQ6UWH4 519 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 VTCN1Q7Z7D3 282 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 LDB1Q86U70 411 aaPredicted RBP4.47□□□□□ -1.69
NPHP3-206ENST00000474871 FAM58AQ8N1B3 248 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 HORMAD2Q8N7B1 307 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 ZCCHC10Q8TBK6 192 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 GPR119Q8TDV5 335 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 C20orf85Q9H1P6 137 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 SIX2Q9NPC8 291 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 HCFC1R1Q9NWW0 138 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 GFOD1Q9NXC2 390 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 KCNK4Q9NYG8 393 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 POMPQ9Y244 141 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 DYRK1BQ9Y463 629 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 URGCP-MRPS24S4R325 110 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 PLXNB2O15031 1838 aa4.46□□□□□ -1.69
NPHP3-206ENST00000474871 K7EQM0 130 aa4.46□□□□□ -1.69
NPHP3-206ENST00000474871 PHOX2AO14813 284 aa4.46□□□□□ -1.69
NPHP3-206ENST00000474871 ITGA5P08648 1049 aa4.46□□□□□ -1.69
NPHP3-206ENST00000474871 PPP3CBP16298 524 aa4.46□□□□□ -1.69
NPHP3-206ENST00000474871 NCK1P16333 377 aa4.46□□□□□ -1.69
NPHP3-206ENST00000474871 PTGER1P34995 402 aa4.46□□□□□ -1.69
NPHP3-206ENST00000474871 TGFBR1P36897 503 aa4.46□□□□□ -1.69
NPHP3-206ENST00000474871 RUNX2Q13950 521 aa4.46□□□□□ -1.69
NPHP3-206ENST00000474871 SCGB2B2Q4G0G5 96 aa4.46□□□□□ -1.69
NPHP3-206ENST00000474871 TMEM198Q66K66 360 aa4.46□□□□□ -1.69
NPHP3-206ENST00000474871 CLEC9AQ6UXN8 241 aa4.46□□□□□ -1.69
NPHP3-206ENST00000474871 ZNF517Q6ZMY9 492 aaPredicted RBP4.46□□□□□ -1.69
NPHP3-206ENST00000474871 CALHM1Q8IU99 346 aa4.46□□□□□ -1.69
NPHP3-206ENST00000474871 WDR36Q8NI36 951 aaKnown RBP4.46□□□□□ -1.69
NPHP3-206ENST00000474871 HS3ST6Q96QI5 342 aa4.46□□□□□ -1.69
NPHP3-206ENST00000474871 ZNF607Q96SK3 696 aa4.46□□□□□ -1.69
NPHP3-206ENST00000474871 PCYT2Q99447 389 aa4.46□□□□□ -1.69
NPHP3-206ENST00000474871 POP1Q99575 1024 aaKnown RBP4.46□□□□□ -1.69
NPHP3-206ENST00000474871 OMDQ99983 421 aa4.46□□□□□ -1.69
NPHP3-206ENST00000474871 C7orf50Q9BRJ6 194 aaKnown RBP4.46□□□□□ -1.69
NPHP3-206ENST00000474871 EMC7Q9NPA0 242 aa4.46□□□□□ -1.69
NPHP3-206ENST00000474871 RASD1Q9Y272 281 aa4.46□□□□□ -1.69
NPHP3-206ENST00000474871 IGKV6D-21A0A0A0MT36 114 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 A0A1W2PQU0 124 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 SAC3D1A6NKF1 404 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 M0R3G1 203 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 CDIPTO14735 213 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 RPLP1P05386 114 aaKnown RBP4.46□□□□□ -1.7
NPHP3-206ENST00000474871 COMTP21964 271 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 ELAVL4P26378 380 aaKnown RBP4.46□□□□□ -1.7
NPHP3-206ENST00000474871 APLNRP35414 380 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 GLUD2P49448 558 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 RAB9AP51151 201 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 SRSF7Q16629 238 aaKnown RBP eCLIP4.46□□□□□ -1.7
NPHP3-206ENST00000474871 PRSS8Q16651 343 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 C4orf17Q53FE4 359 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 OCIAD2Q56VL3 154 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 IDNKQ5T6J7 187 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 SPRYD7Q5W111 196 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 CIR1Q86X95 450 aaPredicted RBP4.46□□□□□ -1.7
NPHP3-206ENST00000474871 PNLDC1Q8NA58 520 aaKnown RBP4.46□□□□□ -1.7
NPHP3-206ENST00000474871 B3GALNT2Q8NCR0 500 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 SMG8Q8ND04 991 aaKnown RBP4.46□□□□□ -1.7
NPHP3-206ENST00000474871 SEMA6DQ8NFY4 1073 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 OR52B4Q8NGK2 314 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 OR10A6Q8NH74 314 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 SMARCD1Q96GM5 515 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 SLC6A18Q96N87 628 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 IL17FQ96PD4 163 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 OR8B4Q96RC9 309 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 SLC25A18Q9H1K4 315 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 VPREB3Q9UKI3 123 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 PSG8Q9UQ74 426 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 WDR45Q9Y484 360 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 HSPB11Q9Y547 144 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 TRIP11Q15643 1979 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 TRBV2A0A0J9YWF9 115 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 SSU72P8A0A1W2PR75 194 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 FBLL1A6NHQ2 334 aaKnown RBP4.46□□□□□ -1.7
NPHP3-206ENST00000474871 HPRP00739 348 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 CYP4B1P13584 511 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 HLA-EP13747 358 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 UCHL3P15374 230 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 TBPP20226 339 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 MSR1P21757 451 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 HRH2P25021 359 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 HOXC5Q00444 222 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 DPYSL3Q14195 570 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 ELAVL3Q14576 367 aaKnown RBP4.46□□□□□ -1.7
NPHP3-206ENST00000474871 TMPRSS7Q7RTY8 843 aa4.46□□□□□ -1.7
NPHP3-206ENST00000474871 ARHGAP12Q8IWW6 846 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms