RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 GNA13Q14344 377 aa12.12□□□□□ -0.47
SEMA3F-208ENST00000470737 PDCD2Q16342 344 aaPredicted RBP12.12□□□□□ -0.47
SEMA3F-208ENST00000470737 SWI5Q1ZZU3 235 aa12.12□□□□□ -0.47
SEMA3F-208ENST00000470737 OTUD3Q5T2D3 398 aaPredicted RBP12.12□□□□□ -0.47
SEMA3F-208ENST00000470737 PAQR6Q6TCH4 344 aa12.12□□□□□ -0.47
SEMA3F-208ENST00000470737 FRRS1Q6ZNA5 592 aa12.12□□□□□ -0.47
SEMA3F-208ENST00000470737 ANKRD46Q86W74 232 aa12.12□□□□□ -0.47
SEMA3F-208ENST00000470737 CMIPQ8IY22 773 aa12.12□□□□□ -0.47
SEMA3F-208ENST00000470737 POMGNT2Q8NAT1 580 aa12.12□□□□□ -0.47
SEMA3F-208ENST00000470737 OR8J2Q8NGG1 315 aa12.12□□□□□ -0.47
SEMA3F-208ENST00000470737 MGARPQ8TDB4 240 aa12.12□□□□□ -0.47
SEMA3F-208ENST00000470737 TMEM45BQ96B21 275 aa12.12□□□□□ -0.47
SEMA3F-208ENST00000470737 ZBTB9Q96C00 473 aa12.12□□□□□ -0.47
SEMA3F-208ENST00000470737 MSI2Q96DH6 328 aaKnown RBP12.12□□□□□ -0.47
SEMA3F-208ENST00000470737 MAELQ96JY0 434 aaKnown RBP12.12□□□□□ -0.47
SEMA3F-208ENST00000470737 C7orf26Q96N11 449 aa12.12□□□□□ -0.47
SEMA3F-208ENST00000470737 SORCS2Q96PQ0 1159 aa12.12□□□□□ -0.47
SEMA3F-208ENST00000470737 SAP130Q9H0E3 1048 aa12.12□□□□□ -0.47
SEMA3F-208ENST00000470737 OBP2BQ9NPH6 170 aa12.12□□□□□ -0.47
SEMA3F-208ENST00000470737 PNPOQ9NVS9 261 aa12.12□□□□□ -0.47
SEMA3F-208ENST00000470737 MARCOQ9UEW3 520 aaPredicted RBP12.12□□□□□ -0.47
SEMA3F-208ENST00000470737 PRSS51A0A1B0GVH4 220 aa12.11□□□□□ -0.47
SEMA3F-208ENST00000470737 TMEM72A0PK05 275 aa12.11□□□□□ -0.47
SEMA3F-208ENST00000470737 SLC35F4A4IF30 521 aa12.11□□□□□ -0.47
SEMA3F-208ENST00000470737 VWC2LB2RUY7 222 aa12.11□□□□□ -0.47
SEMA3F-208ENST00000470737 B9A039 149 aa12.11□□□□□ -0.47
SEMA3F-208ENST00000470737 TGFAP01135 160 aa12.11□□□□□ -0.47
SEMA3F-208ENST00000470737 CRYAAP02489 173 aa12.11□□□□□ -0.47
SEMA3F-208ENST00000470737 GPIP06744 558 aa12.11□□□□□ -0.47
SEMA3F-208ENST00000470737 IMPDH2P12268 514 aa12.11□□□□□ -0.47
SEMA3F-208ENST00000470737 LBPP18428 481 aa12.11□□□□□ -0.47
SEMA3F-208ENST00000470737 TACR3P29371 465 aa12.11□□□□□ -0.47
SEMA3F-208ENST00000470737 SERPINF1P36955 418 aa12.11□□□□□ -0.47
SEMA3F-208ENST00000470737 ANXA11P50995 505 aaKnown RBP12.11□□□□□ -0.47
SEMA3F-208ENST00000470737 UBE2NP61088 152 aaKnown RBP12.11□□□□□ -0.47
SEMA3F-208ENST00000470737 SLC17A1Q14916 467 aa12.11□□□□□ -0.47
SEMA3F-208ENST00000470737 DPY19L1Q2PZI1 675 aa12.11□□□□□ -0.47
SEMA3F-208ENST00000470737 SAXO2Q658L1 398 aa12.11□□□□□ -0.47
SEMA3F-208ENST00000470737 AAED1Q7RTV5 226 aa12.11□□□□□ -0.47
SEMA3F-208ENST00000470737 HMGN2P46Q86SG4 172 aa12.11□□□□□ -0.47
SEMA3F-208ENST00000470737 CNOT9Q92600 299 aaKnown RBP12.11□□□□□ -0.47
SEMA3F-208ENST00000470737 SLC38A2Q96QD8 506 aa12.11□□□□□ -0.47
SEMA3F-208ENST00000470737 SF3B5Q9BWJ5 86 aaKnown RBP12.11□□□□□ -0.47
SEMA3F-208ENST00000470737 PRR14Q9BWN1 585 aa12.11□□□□□ -0.47
SEMA3F-208ENST00000470737 NUF2Q9BZD4 464 aa12.11□□□□□ -0.47
SEMA3F-208ENST00000470737 TMEM45AQ9NWC5 275 aa12.11□□□□□ -0.47
SEMA3F-208ENST00000470737 OSGIN1Q9UJX0 560 aa12.11□□□□□ -0.47
SEMA3F-208ENST00000470737 FBXO9Q9UK97 447 aaPredicted RBP12.11□□□□□ -0.47
SEMA3F-208ENST00000470737 SVEP1Q4LDE5 3571 aa12.1□□□□□ -0.47
SEMA3F-208ENST00000470737 CLDN24A6NM45 220 aa12.1□□□□□ -0.47
SEMA3F-208ENST00000470737 ZNF587BE7ETH6 402 aa12.1□□□□□ -0.47
SEMA3F-208ENST00000470737 SDHDO14521 159 aa12.1□□□□□ -0.47
SEMA3F-208ENST00000470737 AP3D1O14617 1153 aa12.1□□□□□ -0.47
SEMA3F-208ENST00000470737 ATP8B1O43520 1251 aa12.1□□□□□ -0.47
SEMA3F-208ENST00000470737 TGDSO95455 350 aa12.1□□□□□ -0.47
SEMA3F-208ENST00000470737 ERCC1P07992 297 aaPredicted RBP12.1□□□□□ -0.47
SEMA3F-208ENST00000470737 CXCR1P25024 350 aa12.1□□□□□ -0.47
SEMA3F-208ENST00000470737 SLC1A3P43003 542 aa12.1□□□□□ -0.47
SEMA3F-208ENST00000470737 SRSF2Q01130 221 aaKnown RBP12.1□□□□□ -0.47
SEMA3F-208ENST00000470737 FUT5Q11128 374 aa12.1□□□□□ -0.47
SEMA3F-208ENST00000470737 HIKESHIQ53FT3 197 aa12.1□□□□□ -0.47
SEMA3F-208ENST00000470737 SPATA19Q7Z5L4 167 aa12.1□□□□□ -0.47
SEMA3F-208ENST00000470737 GPAT4Q86UL3 456 aa12.1□□□□□ -0.47
SEMA3F-208ENST00000470737 OR9K2Q8NGE7 335 aa12.1□□□□□ -0.47
SEMA3F-208ENST00000470737 WDR60Q8WVS4 1066 aa12.1□□□□□ -0.47
SEMA3F-208ENST00000470737 STON2Q8WXE9 905 aa12.1□□□□□ -0.47
SEMA3F-208ENST00000470737 TESCQ96BS2 214 aa12.1□□□□□ -0.47
SEMA3F-208ENST00000470737 ZG16BQ96DA0 208 aa12.1□□□□□ -0.47
SEMA3F-208ENST00000470737 NEURL3Q96EH8 262 aa12.1□□□□□ -0.47
SEMA3F-208ENST00000470737 AURKBQ96GD4 344 aaPredicted RBP12.1□□□□□ -0.47
SEMA3F-208ENST00000470737 PPP1R36Q96LQ0 422 aa12.1□□□□□ -0.47
SEMA3F-208ENST00000470737 FOXN4Q96NZ1 517 aa12.1□□□□□ -0.47
SEMA3F-208ENST00000470737 SLC35A5Q9BS91 424 aa12.1□□□□□ -0.47
SEMA3F-208ENST00000470737 KATNB1Q9BVA0 655 aa12.1□□□□□ -0.47
SEMA3F-208ENST00000470737 TAPBPLQ9BX59 468 aa12.1□□□□□ -0.47
SEMA3F-208ENST00000470737 RAB1BQ9H0U4 201 aa12.1□□□□□ -0.47
SEMA3F-208ENST00000470737 CA10Q9NS85 328 aa12.1□□□□□ -0.47
SEMA3F-208ENST00000470737 IGHV1-18A0A0C4DH31 117 aa12.09□□□□□ -0.47
SEMA3F-208ENST00000470737 IGHV4-61A0A0C4DH41 118 aa12.09□□□□□ -0.47
SEMA3F-208ENST00000470737 CFAP73A6NFT4 308 aa12.09□□□□□ -0.47
SEMA3F-208ENST00000470737 VSTM5A8MXK1 200 aa12.09□□□□□ -0.47
SEMA3F-208ENST00000470737 SCN2BO60939 215 aa12.09□□□□□ -0.47
SEMA3F-208ENST00000470737 PDE5AO76074 875 aa12.09□□□□□ -0.47
SEMA3F-208ENST00000470737 PGRP06401 933 aa12.09□□□□□ -0.47
SEMA3F-208ENST00000470737 IL7RP16871 459 aa12.09□□□□□ -0.47
SEMA3F-208ENST00000470737 ZNF23P17027 643 aa12.09□□□□□ -0.47
SEMA3F-208ENST00000470737 CLNS1AP54105 237 aaKnown RBP12.09□□□□□ -0.47
SEMA3F-208ENST00000470737 CEACAM7Q14002 265 aa12.09□□□□□ -0.47
SEMA3F-208ENST00000470737 OR7A5Q15622 319 aa12.09□□□□□ -0.47
SEMA3F-208ENST00000470737 MST1LQ2TV78 715 aa12.09□□□□□ -0.47
SEMA3F-208ENST00000470737 CR1LQ2VPA4 569 aa12.09□□□□□ -0.47
SEMA3F-208ENST00000470737 TBRG1Q3YBR2 411 aa12.09□□□□□ -0.47
SEMA3F-208ENST00000470737 AP1ARQ63HQ0 302 aa12.09□□□□□ -0.47
SEMA3F-208ENST00000470737 TMEM225Q6GV28 225 aa12.09□□□□□ -0.47
SEMA3F-208ENST00000470737 VHLLQ6RSH7 139 aa12.09□□□□□ -0.47
SEMA3F-208ENST00000470737 ZNF440Q8IYI8 595 aa12.09□□□□□ -0.47
SEMA3F-208ENST00000470737 TRIML2Q8N7C3 387 aa12.09□□□□□ -0.47
SEMA3F-208ENST00000470737 TMEM99Q8N816 258 aa12.09□□□□□ -0.47
SEMA3F-208ENST00000470737 ANKS4BQ8N8V4 417 aa12.09□□□□□ -0.47
SEMA3F-208ENST00000470737 LRRC8CQ8TDW0 803 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms