RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 TMEM53Q6P2H8 277 aa7.33□□□□□ -1.24
SMC4-212ENST00000470240 SFXN4Q6P4A7 337 aa7.33□□□□□ -1.24
SMC4-212ENST00000470240 RPL22L1Q6P5R6 122 aaKnown RBP7.33□□□□□ -1.24
SMC4-212ENST00000470240 SPATC1Q76KD6 591 aa7.33□□□□□ -1.24
SMC4-212ENST00000470240 CARFQ8N187 725 aa7.33□□□□□ -1.24
SMC4-212ENST00000470240 BCORP1Q8N888 145 aa7.33□□□□□ -1.24
SMC4-212ENST00000470240 SAMD12Q8N8I0 201 aa7.33□□□□□ -1.24
SMC4-212ENST00000470240 SIMC1Q8NDZ2 872 aa7.33□□□□□ -1.24
SMC4-212ENST00000470240 OR6F1Q8NGZ6 308 aa7.33□□□□□ -1.24
SMC4-212ENST00000470240 GRPEL2Q8TAA5 225 aa7.33□□□□□ -1.24
SMC4-212ENST00000470240 LMX1AQ8TE12 382 aa7.33□□□□□ -1.24
SMC4-212ENST00000470240 C15orf40Q8WUR7 153 aa7.33□□□□□ -1.24
SMC4-212ENST00000470240 KISS1RQ969F8 398 aaPredicted RBP7.33□□□□□ -1.24
SMC4-212ENST00000470240 TRIM63Q969Q1 353 aa7.33□□□□□ -1.24
SMC4-212ENST00000470240 CCDC74AQ96AQ1 378 aa7.33□□□□□ -1.24
SMC4-212ENST00000470240 CREB3L1Q96BA8 519 aa7.33□□□□□ -1.24
SMC4-212ENST00000470240 SMIM19Q96E16 107 aa7.33□□□□□ -1.24
SMC4-212ENST00000470240 PTCHD1Q96NR3 888 aa7.33□□□□□ -1.24
SMC4-212ENST00000470240 NEDD4LQ96PU5 975 aa7.33□□□□□ -1.24
SMC4-212ENST00000470240 OR1F2PQ96R84 312 aa7.33□□□□□ -1.24
SMC4-212ENST00000470240 TNFRSF13CQ96RJ3 184 aa7.33□□□□□ -1.24
SMC4-212ENST00000470240 LRRC61Q9BV99 259 aa7.33□□□□□ -1.24
SMC4-212ENST00000470240 YIPF2Q9BWQ6 316 aa7.33□□□□□ -1.24
SMC4-212ENST00000470240 RNF32Q9H0A6 362 aa7.33□□□□□ -1.24
SMC4-212ENST00000470240 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.33□□□□□ -1.247e-12■■■■■ 38.5
SMC4-212ENST00000470240 PPP1R3EQ9H7J1 279 aa7.33□□□□□ -1.24
SMC4-212ENST00000470240 ERVMER34-1Q9H9K5 563 aa7.33□□□□□ -1.24
SMC4-212ENST00000470240 ISG20L2Q9H9L3 353 aaKnown RBP7.33□□□□□ -1.24
SMC4-212ENST00000470240 FAM60AQ9NP50 221 aa7.33□□□□□ -1.24
SMC4-212ENST00000470240 MEPEQ9NQ76 525 aaPredicted RBP7.33□□□□□ -1.24
SMC4-212ENST00000470240 EXOSC3Q9NQT5 275 aaKnown RBP7.33□□□□□ -1.24
SMC4-212ENST00000470240 UBQLN4Q9NRR5 601 aa7.33□□□□□ -1.24
SMC4-212ENST00000470240 FBXO34Q9NWN3 711 aa7.33□□□□□ -1.24
SMC4-212ENST00000470240 WSB2Q9NYS7 404 aaPredicted RBP7.33□□□□□ -1.24
SMC4-212ENST00000470240 STMN3Q9NZ72 180 aa7.33□□□□□ -1.24
SMC4-212ENST00000470240 FLRT3Q9NZU0 649 aa7.33□□□□□ -1.24
SMC4-212ENST00000470240 COPZ2Q9P299 210 aa7.33□□□□□ -1.24
SMC4-212ENST00000470240 KCNE5Q9UJ90 142 aa7.33□□□□□ -1.24
SMC4-212ENST00000470240 IER3IP1Q9Y5U9 82 aa7.33□□□□□ -1.24
SMC4-212ENST00000470240 ARHGEF17Q96PE2 2063 aaPredicted RBP7.32□□□□□ -1.24
SMC4-212ENST00000470240 TRBV2A0A0J9YWF9 115 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 NOTOA8MTQ0 251 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 CHURC1-FNTBB4DL54 471 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 C2CD4DB7Z1M9 353 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 IMPA2O14732 288 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 PHYHO14832 338 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 SSX4O60224 188 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 ITGA10O75578 1167 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 CDC123O75794 336 aaPredicted RBP7.32□□□□□ -1.24
SMC4-212ENST00000470240 NCR1O76036 304 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 ZNF432O94892 652 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 RENP00797 406 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 CSF2P04141 144 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 CHRNB1P11230 501 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 APEHP13798 732 aaKnown RBP7.32□□□□□ -1.24
SMC4-212ENST00000470240 NPR2P20594 1047 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 EDNRAP25101 427 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 IL12BP29460 328 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 GPR3P46089 330 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 GDI2P50395 445 aaKnown RBP7.32□□□□□ -1.24
SMC4-212ENST00000470240 CCR4P51679 360 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 MAZP56270 477 aaKnown RBP7.32□□□□□ -1.24
SMC4-212ENST00000470240 CAV3P56539 151 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 FXYD6P3P58550 94 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 HNRNPKP61978 463 aaKnown RBP eCLIP7.32□□□□□ -1.245e-13■■■■■ 46
SMC4-212ENST00000470240 ZNF85Q03923 595 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 CDK5R1Q15078 307 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 ACSM3Q53FZ2 586 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 HSD17B12Q53GQ0 312 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 EMC4Q5J8M3 183 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 SLC6A19Q695T7 634 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 DMKNQ6E0U4 476 aaPredicted RBP7.32□□□□□ -1.24
SMC4-212ENST00000470240 FAAH2Q6GMR7 532 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 ZC3H14Q6PJT7 736 aaKnown RBP7.32□□□□□ -1.24
SMC4-212ENST00000470240 KIRREL2Q6UWL6 708 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 TMEM91Q6ZNR0 172 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 TRILQ7L0X0 811 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 OVCH1Q7RTY7 1134 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 KCTD20Q7Z5Y7 419 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 CDH24Q86UP0 819 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 GPR135Q8IZ08 494 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 ARL14Q8N4G2 192 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 CYB561A3Q8NBI2 242 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 RCBTB1Q8NDN9 531 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 DUSP18Q8NEJ0 188 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 SDR9C7Q8NEX9 313 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 OR6K6Q8NGW6 343 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 OR4K13Q8NH42 304 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 OR51Q1Q8NH59 317 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 OR14A16Q8NHC5 309 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 MOSPD2Q8NHP6 518 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 C16orf52Q8NHV5 167 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 ZNF563Q8TA94 476 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 ZNF671Q8TAW3 534 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 TRMT10AQ8TBZ6 339 aaKnown RBP7.32□□□□□ -1.24
SMC4-212ENST00000470240 THAP4Q8WY91 577 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 SLC7A6Q92536 515 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 MVB12AQ96EY5 273 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 HSPA12BQ96MM6 686 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 CMTM3Q96MX0 182 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms