RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 ITGA10O75578 1167 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 OR2J2O76002 312 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 CLPXO76031 633 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 HPP00738 406 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 BGLAPP02818 100 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 CD14P08571 375 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 TSPAN19P0C672 248 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 ZNF182P17025 639 aaPredicted RBP8.49□□□□□ -1.05
SMC1A-205ENST00000469129 SLC2A5P22732 501 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 PSMA1P25786 263 aaKnown RBP8.49□□□□□ -1.05
SMC1A-205ENST00000469129 GTF2E2P29084 291 aaKnown RBP8.49□□□□□ -1.05
SMC1A-205ENST00000469129 SDHAP31040 664 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 UQCRC1P31930 480 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 SSR4P51571 173 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 SLC16A1P53985 500 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 GAS1P54826 345 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 BDH1Q02338 343 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 EGR4Q05215 589 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 ACSM1Q08AH1 577 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 FHL1Q13642 323 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 IL10RAQ13651 578 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 GGTLC2Q14390 218 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 SGCBQ16585 318 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.49□□□□□ -1.05
SMC1A-205ENST00000469129 KLHL12Q53G59 568 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 SLC35F1Q5T1Q4 408 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 DESI1Q6ICB0 168 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 C19orf48Q6RUI8 117 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 LYPD8Q6UX82 237 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 RAB43Q86YS6 212 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 ACBD7Q8N6N7 88 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 BBS1Q8NFJ9 593 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 OR11G2Q8NGC1 345 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 OR51G2Q8NGK0 314 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 OR5M3Q8NGP4 307 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 DUSP19Q8WTR2 217 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 CT55Q8WUE5 264 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 ASB15Q8WXK1 588 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 UFD1Q92890 307 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 DDIT4LQ96D03 193 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 DTNBP1Q96EV8 351 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 DCSTAMPQ9H295 470 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 PTGES2Q9H7Z7 377 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 CCDC59Q9P031 241 aaKnown RBP8.49□□□□□ -1.05
SMC1A-205ENST00000469129 TCFL5Q9UL49 500 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 STUB1Q9UNE7 303 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 CAB39Q9Y376 341 aaPredicted RBP8.49□□□□□ -1.05
SMC1A-205ENST00000469129 IER3IP1Q9Y5U9 82 aa8.49□□□□□ -1.05
SMC1A-205ENST00000469129 LOC100506127A0A0U1RQW1 187 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 TEX51A0A1B0GUA7 166 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 TMEM72A0PK05 275 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 CCDC182A6NF36 153 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 FAM183AA6NL82 134 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 C4orf47A7E2U8 309 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 C21orf140B9A014 251 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 BLOC1S5-TXNDC5H3BN57 136 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 ETV2O00321 342 aaPredicted RBP8.48□□□□□ -1.05
SMC1A-205ENST00000469129 ZNF208O43345 1280 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 GMFGO60234 142 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 TRIM3O75382 744 aaPredicted RBP8.48□□□□□ -1.05
SMC1A-205ENST00000469129 TXNDC12O95881 172 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 ADRA2AP08913 450 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 LIMS3P0CW19 117 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 LIMS4P0CW20 117 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 CPEP16870 476 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 PRKCAP17252 672 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 TCN2P20062 427 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 NR4A1P22736 598 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 SOX6P35712 828 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 SOX3P41225 446 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 RPS5P46782 204 aaKnown RBP8.48□□□□□ -1.05
SMC1A-205ENST00000469129 ETV1P50549 477 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 TAS2R43P59537 309 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 VBP1P61758 197 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 NCS1P62166 190 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 RPL18Q07020 188 aaKnown RBP8.48□□□□□ -1.05
SMC1A-205ENST00000469129 CHAF1BQ13112 559 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 SSPNQ14714 243 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 TOMM34Q15785 309 aaPredicted RBP8.48□□□□□ -1.05
SMC1A-205ENST00000469129 SLC25A53Q5H9E4 307 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 HES3Q5TGS1 186 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 C1orf140Q5VVS0 124 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 GLRX5Q86SX6 157 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 GPALPP1Q8IXQ4 340 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 ARMC10Q8N2F6 343 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 SIRT6Q8N6T7 355 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 LRRC17Q8N6Y2 441 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 AMER2Q8N7J2 671 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 LSM14AQ8ND56 463 aaKnown RBP8.48□□□□□ -1.05
SMC1A-205ENST00000469129 SDR9C7Q8NEX9 313 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 OR52E2Q8NGJ4 325 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 OR5J2Q8NH18 312 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 NDNFQ8TB73 568 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 DYNC2LI1Q8TCX1 351 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 SLC25A43Q8WUT9 341 aaPredicted RBP8.48□□□□□ -1.05
SMC1A-205ENST00000469129 S100ZQ8WXG8 99 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 KISS1RQ969F8 398 aaPredicted RBP8.48□□□□□ -1.05
SMC1A-205ENST00000469129 KTI12Q96EK9 354 aaPredicted RBP8.48□□□□□ -1.05
SMC1A-205ENST00000469129 MRGPRX4Q96LA9 322 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 MOGAT1Q96PD6 335 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms