RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 WACQ9BTA9 647 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 POLR1BQ9H9Y6 1135 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 BRD7Q9NPI1 651 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 SCOCQ9UIL1 159 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 CHTOPQ9Y3Y2 248 aaKnown RBP7.51□□□□□ -1.21
BRCA1-208ENST00000468300 DOCK10Q96BY6 2186 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 IGLV3-32A0A0A0MS00 114 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 NSG1A0A0A6YYJ2 146 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 ANKRD34BA5PLL1 514 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 FAM47E-STBD1D6RA91 191 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 PSMD9O00233 223 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 ETV2O00321 342 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-208ENST00000468300 KPNA4O00629 521 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-208ENST00000468300 SCO2O43819 266 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 PRKYO43930 277 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 EIF4E2O60573 245 aaKnown RBP7.51□□□□□ -1.21
BRCA1-208ENST00000468300 PCMT1P22061 227 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 OTX2P32243 289 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 ALDH3B2P48448 385 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 GIPRP48546 466 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 SLC35A2P78381 396 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 LTBQ06643 244 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 NDUFA5Q16718 116 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 WBP2NLQ6ICG8 309 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 THSD4Q6ZMP0 1018 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 TMPRSS7Q7RTY8 843 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 BCDIN3DQ7Z5W3 292 aaKnown RBP7.51□□□□□ -1.21
BRCA1-208ENST00000468300 OR5W2Q8NH69 310 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 PIGXQ8TBF5 258 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 FANK1Q8TC84 345 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 DUSP19Q8WTR2 217 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 ADAMTS14Q8WXS8 1223 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 BPIFA2Q96DR5 249 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 SPACA9Q96E40 222 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-208ENST00000468300 SH3YL1Q96HL8 342 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-208ENST00000468300 MRPS26Q9BYN8 205 aaKnown RBP7.51□□□□□ -1.21
BRCA1-208ENST00000468300 DUSP21Q9H596 190 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 MCCC2Q9HCC0 563 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 SPATA2Q9UM82 520 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 SIGLEC7Q9Y286 467 aa7.51□□□□□ -1.21
BRCA1-208ENST00000468300 BSNQ9UPA5 3926 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 MPDZO75970 2070 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 LRRN3E7EW58 273 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 GMFGO60234 142 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 TSPAN19P0C672 248 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 GSTM3P21266 225 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 CASP3P42574 277 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 SLC15A1P46059 708 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 CXCR4P61073 352 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 NHLH1Q02575 133 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 SRSF6Q13247 344 aaKnown RBP7.5□□□□□ -1.21
BRCA1-208ENST00000468300 DOC2BQ14184 412 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 TGIF1Q15583 401 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 KRTCAP3Q53RY4 240 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 BROXQ5VW32 411 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 FAM122CQ6P4D5 195 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 TMEM81Q6P7N7 255 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 RHOUQ7L0Q8 258 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 LRRC17Q8N6Y2 441 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 CLDN22Q8N7P3 220 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 CELF2-AS1Q8N7Q2 184 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 CHAC2Q8WUX2 184 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 TTC9Q92623 222 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 APOL4Q9BPW4 351 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 DEFB126Q9BYW3 111 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 P4HTMQ9NXG6 502 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 SELENONQ9NZV5 590 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 MBD2Q9UBB5 411 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 IL20RAQ9UHF4 553 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 BHLHE40O14503 412 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 GNB5O14775 395 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 HCRTR2O43614 444 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 CNOT4O95628 575 aaKnown RBP7.5□□□□□ -1.21
BRCA1-208ENST00000468300 IFI30P13284 250 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 SLC1A3P43003 542 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 P2RX1P51575 399 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 SNRPGP62308 76 aaKnown RBP7.5□□□□□ -1.21
BRCA1-208ENST00000468300 COL28A1Q2UY09 1125 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 TMEM201Q5SNT2 666 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 OR5M10Q6IEU7 315 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 SATL1Q86VE3 508 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 CDH26Q8IXH8 852 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 PHC2Q8IXK0 858 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 WDSUB1Q8N9V3 476 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 SETD9Q8NE22 299 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 OR13C2Q8NGS9 318 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 BRIX1Q8TDN6 353 aaKnown RBP7.5□□□□□ -1.21
BRCA1-208ENST00000468300 DNAJA4Q8WW22 397 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-208ENST00000468300 NMD3Q96D46 503 aaKnown RBP7.5□□□□□ -1.21
BRCA1-208ENST00000468300 TBL1XR1Q9BZK7 514 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 RBM38Q9H0Z9 239 aaKnown RBP7.5□□□□□ -1.21
BRCA1-208ENST00000468300 CDCP1Q9H5V8 836 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 PLCXD1Q9NUJ7 323 aa7.5□□□□□ -1.21
BRCA1-208ENST00000468300 GTPBP1O00178 669 aaKnown RBP7.49□□□□□ -1.21
BRCA1-208ENST00000468300 EFNA2O43921 213 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 NPIPB7O75200 414 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 IGF2P01344 180 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 POU1F1P28069 291 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 GABARAPL2P60520 117 aa7.49□□□□□ -1.21
BRCA1-208ENST00000468300 RPS4XP62701 263 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms