RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	NKX2-6	A6NCS4	301 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	ENO4	A6NNW6	628 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	FAM47E-STBD1	D6RA91	191 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	ETV2	O00321	342 aa	Predicted RBP	10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	SLC16A6	O15403	523 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	FRS3	O43559	492 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	SCO2	O43819	266 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	PRG2	P13727	222 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	HTR2A	P28223	471 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	ADH6	P28332	368 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	SSTR2	P30874	369 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	CAPG	P40121	348 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	PTGDS	P41222	190 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	MASP1	P48740	699 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	DAP	P51397	102 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	CTBP2	P56545	445 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	ZNF117	Q03924	483 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	ANKDD1A	Q495B1	522 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	SLC36A3	Q495N2	470 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	TIGD3	Q6B0B8	471 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	DESI1	Q6ICB0	168 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	MEX3B	Q6ZN04	569 aa	Known RBP	10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	GRINA	Q7Z429	371 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	CLDN22	Q8N7P3	220 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	AQP11	Q8NBQ7	271 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	SETD9	Q8NE22	299 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	DUSP19	Q8WTR2	217 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	TMEM239	Q8WW34	195 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	TIMP4	Q99727	224 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	TMEM43	Q9BTV4	400 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	GABARAPL3	Q9BY60	117 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	ANKRD60	Q9BZ19	345 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	UCK2	Q9BZX2	261 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	ADAM19	Q9H013	955 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	SMURF2	Q9HAU4	748 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	KCNJ16	Q9NPI9	418 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	NPDC1	Q9NQX5	325 aa	Predicted RBP	10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	FLRT3	Q9NZU0	649 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	RHCG	Q9UBD6	479 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	TMEFF2	Q9UIK5	374 aa	Predicted RBP	10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	AP4B1	Q9Y6B7	739 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	ABCA12	Q86UK0	2595 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	APC	P25054	2843 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	PKDREJ	Q9NTG1	2253 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	LRBA	P50851	2863 aa		10.87	□□□□□ -0.67
CTNS-205	ENST00000467663	FBN2	P35556	2912 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	PCNX3	Q9H6A9	2034 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663		A0A0G2JNJ9	132 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	ELOA3D	A6NLF2	546 aa	Predicted RBP	10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	FAM90A27P	A6NNH2	459 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	AHRR	A9YTQ3	701 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	DLGAP1	O14490	977 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	GNB5	O14775	395 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	SNPH	O15079	494 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	TRAPPC6A	O75865	159 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	PRKACG	P22612	351 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	FPR3	P25089	353 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	RYK	P34925	604 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	EIF1	P41567	113 aa	Known RBP	10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	IDH2	P48735	452 aa	Known RBP	10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	CCR4	P51679	360 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	PRKCD	Q05655	676 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	CRYZ	Q08257	329 aa	Known RBP	10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	PPP1R8	Q12972	351 aa	Known RBP	10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	TSPAN31	Q12999	210 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	KEAP1	Q14145	624 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	ELOA3B	Q3SY89	546 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	GLYR1	Q49A26	553 aa	Predicted RBP	10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	SLC25A53	Q5H9E4	307 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	RIPPLY2	Q5TAB7	128 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	VASN	Q6EMK4	673 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	PGBD2	Q6P3X8	592 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	CBLN3	Q6UW01	205 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	TMPRSS11F	Q6ZWK6	438 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	HS3ST5	Q8IZT8	346 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	CADM2	Q8N3J6	435 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	GATS	Q8NAP1	163 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	ELOA3	Q8NG57	546 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	OR1J4	Q8NGS1	313 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	OR6S1	Q8NH40	331 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	GPR119	Q8TDV5	335 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	C3orf49	Q96BT1	292 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	MRGPRX4	Q96LA9	322 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	LURAP1	Q96LR2	239 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	NR1H4	Q96RI1	486 aa	Predicted RBP	10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	PRSS27	Q9BQR3	290 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	TEX12	Q9BXU0	123 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	PRDM14	Q9GZV8	571 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	ALKBH4	Q9NXW9	302 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	TAS2R10	Q9NYW0	307 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663		Q9UFV3	132 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	MRPS18C	Q9Y3D5	142 aa	Known RBP	10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	MPDZ	O75970	2070 aa		10.86	□□□□□ -0.67
CTNS-205	ENST00000467663	PHF3	Q92576	2039 aa	Known RBP	10.85	□□□□□ -0.67
CTNS-205	ENST00000467663	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		10.85	□□□□□ -0.67
CTNS-205	ENST00000467663	CBR3	O75828	277 aa		10.85	□□□□□ -0.67
CTNS-205	ENST00000467663	LYPD3	O95274	346 aa		10.85	□□□□□ -0.67
CTNS-205	ENST00000467663	SNAP29	O95721	258 aa		10.85	□□□□□ -0.67
CTNS-205	ENST00000467663	NUDT14	O95848	222 aa		10.85	□□□□□ -0.67
CTNS-205	ENST00000467663	GAST	P01350	101 aa		10.85	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms