RNA–Protein interactions for RNA: ENST00000465158.5

RBM39-225, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 825 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-225	ENST00000465158	CRISP1	P54107	249 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	CXCR4	P61073	352 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	CSNK2A1	P68400	391 aa	Predicted RBP	6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	IL1RL1	Q01638	556 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	SF3B4	Q15427	424 aa	Known RBP eCLIP	6.06	□□□□□ -1.44	3e-7	■■■■■ 41.7
RBM39-225	ENST00000465158	OR1C1	Q15619	314 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	INA	Q16352	499 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	HYAL4	Q2M3T9	481 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	DEFB109B	Q30KR1	87 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	FAM69A	Q5T7M9	428 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	MEDAG	Q5VYS4	303 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	B3GNTL1	Q67FW5	361 aa	Predicted RBP	6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	FCRLB	Q6BAA4	426 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	SLC27A4	Q6P1M0	643 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	PGBD2	Q6P3X8	592 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	BORA	Q6PGQ7	559 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	SMARCD3	Q6STE5	483 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	CBLN3	Q6UW01	205 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	HDDC2	Q7Z4H3	204 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	THAP5	Q7Z6K1	395 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	HMGN2P46	Q86SG4	172 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	OAF	Q86UD1	273 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	VASH2	Q86V25	355 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	NKAIN4	Q8IVV8	208 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	NRM	Q8IXM6	262 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	MARVELD2	Q8N4S9	558 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	SCAI	Q8N9R8	606 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	GATS	Q8NAP1	163 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	OR2M3	Q8NG83	312 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	MFSD8	Q8NHS3	518 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	SNRNP27	Q8WVK2	155 aa	Known RBP	6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	ZHX1-C8orf76	Q96EF9	292 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	SGTB	Q96EQ0	304 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	PLEKHA8	Q96JA3	519 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	PRSS27	Q9BQR3	290 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	ASPN	Q9BXN1	380 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	DSN1	Q9H410	356 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	TOR3A	Q9H497	397 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	SMURF2	Q9HAU4	748 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	TIGAR	Q9NQ88	270 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	NANS	Q9NR45	359 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	IMPAD1	Q9NX62	359 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	FLRT3	Q9NZU0	649 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	RHCG	Q9UBD6	479 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	TMEFF2	Q9UIK5	374 aa	Predicted RBP	6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	TUBD1	Q9UJT1	453 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	ZNF229	Q9UJW7	825 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	OSGIN1	Q9UJX0	560 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	DKKL1	Q9UK85	242 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	SLC6A5	Q9Y345	797 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	TMED7	Q9Y3B3	224 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	GMPPB	Q9Y5P6	360 aa		6.06	□□□□□ -1.44
RBM39-225	ENST00000465158	SH3D21	A4FU49	640 aa		6.05	□□□□□ -1.44
RBM39-225	ENST00000465158		K7ENP7	123 aa		6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	IMPA2	O14732	288 aa		6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	BCKDK	O14874	412 aa		6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	SUSD5	O60279	629 aa		6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	ZNF354A	O60765	605 aa	Predicted RBP	6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	MRPS14	O60783	128 aa	Known RBP	6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	SEMA7A	O75326	666 aa		6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	NEURL1	O76050	574 aa		6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	NDUFB2	O95178	105 aa		6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	VAMP5	O95183	116 aa		6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	OR6A2	O95222	327 aa		6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	TNFAIP8	O95379	198 aa		6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	NTN1	O95631	604 aa		6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	SNAP29	O95721	258 aa		6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	IFNG	P01579	166 aa		6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	CELA2A	P08217	269 aa		6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	CCL3	P10147	92 aa		6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	CD8B	P10966	210 aa		6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	NR2C1	P13056	603 aa		6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	APEH	P13798	732 aa	Known RBP	6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	HK1	P19367	917 aa		6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	FUT1	P19526	365 aa		6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	PAICS	P22234	425 aa	Known RBP	6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	SLC6A6	P31641	620 aa		6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	GGT2	P36268	569 aa		6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	PTGDS	P41222	190 aa		6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	GIPR	P48546	466 aa		6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	CENPA	P49450	140 aa		6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	ST13	P50502	369 aa	Known RBP	6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	TNFSF10	P50591	281 aa		6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	ADARB1	P78563	741 aa	Known RBP	6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	HOXC5	Q00444	222 aa		6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	CRYZ	Q08257	329 aa	Known RBP	6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	KCNAB2	Q13303	367 aa		6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	PTGES3	Q15185	160 aa	Known RBP	6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	BCL2A1	Q16548	175 aa		6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	PLPPR5	Q32ZL2	321 aa		6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	ZBED5	Q49AG3	693 aa		6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	ZNF766	Q5HY98	468 aa		6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	EMC4	Q5J8M3	183 aa		6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	WIPI1	Q5MNZ9	446 aa	Predicted RBP	6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	RBM48	Q5RL73	367 aa	Known RBP	6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	GPR139	Q6DWJ6	353 aa		6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	RPUSD3	Q6P087	351 aa	Known RBP	6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	INO80C	Q6PI98	192 aa	Predicted RBP	6.05	□□□□□ -1.44
RBM39-225	ENST00000465158	TBPL2	Q6SJ96	375 aa		6.05	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms