RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 GPAT4Q86UL3 456 aa18.02■□□□□ 0.48
CPSF7-209ENST00000463244 ZIM3Q96PE6 472 aa18.02■□□□□ 0.48
CPSF7-209ENST00000463244 TRNT1Q96Q11 434 aaKnown RBP18.02■□□□□ 0.48
CPSF7-209ENST00000463244 DPY30Q9C005 99 aa18.02■□□□□ 0.48
CPSF7-209ENST00000463244 ADAM19Q9H013 955 aa18.02■□□□□ 0.48
CPSF7-209ENST00000463244 RAB1BQ9H0U4 201 aa18.02■□□□□ 0.48
CPSF7-209ENST00000463244 SLC38A1Q9H2H9 487 aa18.02■□□□□ 0.48
CPSF7-209ENST00000463244 MARCOQ9UEW3 520 aaPredicted RBP18.02■□□□□ 0.48
CPSF7-209ENST00000463244 MGAM2Q2M2H8 2515 aa18.01■□□□□ 0.47
CPSF7-209ENST00000463244 ARPC4-TTLL3A0A0A6YYG9 625 aa18.01■□□□□ 0.47
CPSF7-209ENST00000463244 TLDC2A0PJX2 215 aa18.01■□□□□ 0.47
CPSF7-209ENST00000463244 CFAP73A6NFT4 308 aa18.01■□□□□ 0.47
CPSF7-209ENST00000463244 ZNF587BE7ETH6 402 aa18.01■□□□□ 0.47
CPSF7-209ENST00000463244 KRT33AO76009 404 aa18.01■□□□□ 0.47
CPSF7-209ENST00000463244 LGI1O95970 557 aa18.01■□□□□ 0.47
CPSF7-209ENST00000463244 C1QCP02747 245 aa18.01■□□□□ 0.47
CPSF7-209ENST00000463244 TACSTD2P09758 323 aa18.01■□□□□ 0.47
CPSF7-209ENST00000463244 CECR9P0C854 216 aa18.01■□□□□ 0.47
CPSF7-209ENST00000463244 IL2RGP31785 369 aa18.01■□□□□ 0.47
CPSF7-209ENST00000463244 CHI3L1P36222 383 aaPredicted RBP18.01■□□□□ 0.47
CPSF7-209ENST00000463244 EPS8Q12929 822 aa18.01■□□□□ 0.47
CPSF7-209ENST00000463244 CASP8Q14790 479 aa18.01■□□□□ 0.47
CPSF7-209ENST00000463244 OR7A5Q15622 319 aa18.01■□□□□ 0.47
CPSF7-209ENST00000463244 SYPL1Q16563 259 aa18.01■□□□□ 0.47
CPSF7-209ENST00000463244 C3orf36Q3SXR2 165 aa18.01■□□□□ 0.47
CPSF7-209ENST00000463244 ANKRD16Q6P6B7 361 aa18.01■□□□□ 0.47
CPSF7-209ENST00000463244 VHLLQ6RSH7 139 aa18.01■□□□□ 0.47
CPSF7-209ENST00000463244 ANKFN1Q8N957 763 aa18.01■□□□□ 0.47
CPSF7-209ENST00000463244 VPS37AQ8NEZ2 397 aa18.01■□□□□ 0.47
CPSF7-209ENST00000463244 TESCQ96BS2 214 aa18.01■□□□□ 0.47
CPSF7-209ENST00000463244 ZNF317Q96PQ6 595 aaPredicted RBP18.01■□□□□ 0.47
CPSF7-209ENST00000463244 SLC35A5Q9BS91 424 aa18.01■□□□□ 0.47
CPSF7-209ENST00000463244 AKTIPQ9H8T0 292 aa18.01■□□□□ 0.47
CPSF7-209ENST00000463244 FBXO9Q9UK97 447 aaPredicted RBP18.01■□□□□ 0.47
CPSF7-209ENST00000463244 LILRA1O75019 489 aa18■□□□□ 0.47
CPSF7-209ENST00000463244 IGLV1-44P01699 117 aa18■□□□□ 0.47
CPSF7-209ENST00000463244 BPGMP07738 259 aa18■□□□□ 0.47
CPSF7-209ENST00000463244 CHRM4P08173 479 aa18■□□□□ 0.47
CPSF7-209ENST00000463244 NUDT17P0C025 328 aa18■□□□□ 0.47
CPSF7-209ENST00000463244 DAOP14920 347 aa18■□□□□ 0.47
CPSF7-209ENST00000463244 UQCRBP14927 111 aa18■□□□□ 0.47
CPSF7-209ENST00000463244 ITGA2P17301 1181 aa18■□□□□ 0.47
CPSF7-209ENST00000463244 RPS4Y1P22090 263 aaKnown RBP18■□□□□ 0.47
CPSF7-209ENST00000463244 CALCRP30988 508 aa18■□□□□ 0.47
CPSF7-209ENST00000463244 SELENOPP49908 381 aa18■□□□□ 0.47
CPSF7-209ENST00000463244 P2RY4P51582 365 aa18■□□□□ 0.47
CPSF7-209ENST00000463244 CHN2P52757 468 aa18■□□□□ 0.47
CPSF7-209ENST00000463244 UBE2NP61088 152 aaKnown RBP18■□□□□ 0.47
CPSF7-209ENST00000463244 LGALS3BPQ08380 585 aa18■□□□□ 0.47
CPSF7-209ENST00000463244 LRRC74BQ6ZQY2 392 aa18■□□□□ 0.47
CPSF7-209ENST00000463244 MEX3DQ86XN8 651 aaKnown RBP18■□□□□ 0.47
CPSF7-209ENST00000463244 NUP37Q8NFH4 326 aa18■□□□□ 0.47
CPSF7-209ENST00000463244 OR4F15Q8NGB8 312 aa18■□□□□ 0.47
CPSF7-209ENST00000463244 KIF18AQ8NI77 898 aa18■□□□□ 0.47
CPSF7-209ENST00000463244 WDR60Q8WVS4 1066 aa18■□□□□ 0.47
CPSF7-209ENST00000463244 BCL2L2Q92843 193 aaPredicted RBP18■□□□□ 0.47
CPSF7-209ENST00000463244 HPS1Q92902 700 aa18■□□□□ 0.47
CPSF7-209ENST00000463244 PPP1R36Q96LQ0 422 aa18■□□□□ 0.47
CPSF7-209ENST00000463244 ALKBH3Q96Q83 286 aaPredicted RBP18■□□□□ 0.47
CPSF7-209ENST00000463244 TMEFF2Q9UIK5 374 aaPredicted RBP18■□□□□ 0.47
CPSF7-209ENST00000463244 DYSFO75923 2080 aa17.99■□□□□ 0.47
CPSF7-209ENST00000463244 NR5A2O00482 541 aa17.99■□□□□ 0.47
CPSF7-209ENST00000463244 CXCR1P25024 350 aa17.99■□□□□ 0.47
CPSF7-209ENST00000463244 TUBA1BP68363 451 aa17.99■□□□□ 0.47
CPSF7-209ENST00000463244 TUBA4AP68366 448 aa17.99■□□□□ 0.47
CPSF7-209ENST00000463244 PDCD2Q16342 344 aaPredicted RBP17.99■□□□□ 0.47
CPSF7-209ENST00000463244 GSTA3Q16772 222 aa17.99■□□□□ 0.47
CPSF7-209ENST00000463244 SPANXN4Q5MJ08 99 aa17.99■□□□□ 0.47
CPSF7-209ENST00000463244 MRPL2Q5T653 305 aaKnown RBP17.99■□□□□ 0.47
CPSF7-209ENST00000463244 TUBA1AQ71U36 451 aa17.99■□□□□ 0.47
CPSF7-209ENST00000463244 LINGO2Q7L985 606 aa17.99■□□□□ 0.47
CPSF7-209ENST00000463244 RNF130Q86XS8 419 aa17.99■□□□□ 0.47
CPSF7-209ENST00000463244 RIBC1Q8N443 379 aaPredicted RBP17.99■□□□□ 0.47
CPSF7-209ENST00000463244 FAM169BQ8N8A8 192 aa17.99■□□□□ 0.47
CPSF7-209ENST00000463244 LINC01356Q8N9X3 169 aa17.99■□□□□ 0.47
CPSF7-209ENST00000463244 MAGEE2Q8TD90 523 aaPredicted RBP17.99■□□□□ 0.47
CPSF7-209ENST00000463244 NELFAQ9H3P2 528 aa17.99■□□□□ 0.47
CPSF7-209ENST00000463244 MTHFD2LQ9H903 347 aaPredicted RBP17.99■□□□□ 0.47
CPSF7-209ENST00000463244 SEC61A2Q9H9S3 476 aa17.99■□□□□ 0.47
CPSF7-209ENST00000463244 MEGF8Q7Z7M0 2845 aa17.99■□□□□ 0.47
CPSF7-209ENST00000463244 A0A096LPE4 126 aa17.98■□□□□ 0.47
CPSF7-209ENST00000463244 A0A1W2PPZ6 126 aa17.98■□□□□ 0.47
CPSF7-209ENST00000463244 OR6C65A6NJZ3 312 aa17.98■□□□□ 0.47
CPSF7-209ENST00000463244 SNUPNO95149 360 aaKnown RBP17.98■□□□□ 0.47
CPSF7-209ENST00000463244 VAMP5O95183 116 aa17.98■□□□□ 0.47
CPSF7-209ENST00000463244 IGKV3-15P01624 115 aa17.98■□□□□ 0.47
CPSF7-209ENST00000463244 IL7RP16871 459 aa17.98■□□□□ 0.47
CPSF7-209ENST00000463244 SRP14P37108 136 aaKnown RBP17.98■□□□□ 0.47
CPSF7-209ENST00000463244 GNA13Q14344 377 aa17.98■□□□□ 0.47
CPSF7-209ENST00000463244 DPY19L1Q2PZI1 675 aa17.98■□□□□ 0.47
CPSF7-209ENST00000463244 TMEM225Q6GV28 225 aa17.98■□□□□ 0.47
CPSF7-209ENST00000463244 CREB3L2Q70SY1 520 aa17.98■□□□□ 0.47
CPSF7-209ENST00000463244 NEU4Q8WWR8 484 aaPredicted RBP17.98■□□□□ 0.47
CPSF7-209ENST00000463244 CCDC115Q96NT0 180 aa17.98■□□□□ 0.47
CPSF7-209ENST00000463244 ZNF442Q9H7R0 627 aa17.98■□□□□ 0.47
CPSF7-209ENST00000463244 MOV10Q9HCE1 1003 aaKnown RBP17.98■□□□□ 0.47
CPSF7-209ENST00000463244 ADPRHL2Q9NX46 363 aa17.98■□□□□ 0.47
CPSF7-209ENST00000463244 hCG_2039718K7EN88 272 aa17.97■□□□□ 0.47
CPSF7-209ENST00000463244 DBIP07108 87 aaKnown RBP17.97■□□□□ 0.47
CPSF7-209ENST00000463244 APEX1P27695 318 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms