RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-204ENST00000462815 PRPS1P60891 318 aa9.7□□□□□ -0.86
PTPN7-204ENST00000462815 MAD2L1Q13257 205 aaPredicted RBP9.7□□□□□ -0.86
PTPN7-204ENST00000462815 TBRG1Q3YBR2 411 aa9.7□□□□□ -0.86
PTPN7-204ENST00000462815 SPANXN4Q5MJ08 99 aa9.7□□□□□ -0.86
PTPN7-204ENST00000462815 MYPOPQ86VE0 399 aaPredicted RBP9.7□□□□□ -0.86
PTPN7-204ENST00000462815 ZNF781Q8N8C0 355 aa9.7□□□□□ -0.86
PTPN7-204ENST00000462815 OR1K1Q8NGR3 316 aa9.7□□□□□ -0.86
PTPN7-204ENST00000462815 DDIT4LQ96D03 193 aa9.7□□□□□ -0.86
PTPN7-204ENST00000462815 C1orf159Q96HA4 380 aa9.7□□□□□ -0.86
PTPN7-204ENST00000462815 CCDC115Q96NT0 180 aa9.7□□□□□ -0.86
PTPN7-204ENST00000462815 TRNT1Q96Q11 434 aaKnown RBP9.7□□□□□ -0.86
PTPN7-204ENST00000462815 SLC38A2Q96QD8 506 aa9.7□□□□□ -0.86
PTPN7-204ENST00000462815 PIMREGQ9BSJ6 248 aa9.7□□□□□ -0.86
PTPN7-204ENST00000462815 KATNB1Q9BVA0 655 aa9.7□□□□□ -0.86
PTPN7-204ENST00000462815 SF3B5Q9BWJ5 86 aaKnown RBP9.7□□□□□ -0.86
PTPN7-204ENST00000462815 BPESC1Q9GZL8 116 aa9.7□□□□□ -0.86
PTPN7-204ENST00000462815 PIF1Q9H611 641 aa9.7□□□□□ -0.86
PTPN7-204ENST00000462815 OBP2BQ9NPH6 170 aa9.7□□□□□ -0.86
PTPN7-204ENST00000462815 CA10Q9NS85 328 aa9.7□□□□□ -0.86
PTPN7-204ENST00000462815 UPB1Q9UBR1 384 aa9.7□□□□□ -0.86
PTPN7-204ENST00000462815 CHST2Q9Y4C5 530 aa9.7□□□□□ -0.86
PTPN7-204ENST00000462815 FKBP7Q9Y680 259 aa9.7□□□□□ -0.86
PTPN7-204ENST00000462815 DSPPQ9NZW4 1301 aa9.7□□□□□ -0.86
PTPN7-204ENST00000462815 PKD1L1Q8TDX9 2849 aa9.69□□□□□ -0.86
PTPN7-204ENST00000462815 ZNF503-AS2A6NEH8 195 aa9.69□□□□□ -0.86
PTPN7-204ENST00000462815 KLF11O14901 512 aa9.69□□□□□ -0.86
PTPN7-204ENST00000462815 AKR7A3O95154 331 aa9.69□□□□□ -0.86
PTPN7-204ENST00000462815 LGI1O95970 557 aa9.69□□□□□ -0.86
PTPN7-204ENST00000462815 IGKV3-15P01624 115 aa9.69□□□□□ -0.86
PTPN7-204ENST00000462815 TACSTD2P09758 323 aa9.69□□□□□ -0.86
PTPN7-204ENST00000462815 CECR9P0C854 216 aa9.69□□□□□ -0.86
PTPN7-204ENST00000462815 BMP4P12644 408 aa9.69□□□□□ -0.86
PTPN7-204ENST00000462815 APEHP13798 732 aaKnown RBP9.69□□□□□ -0.86
PTPN7-204ENST00000462815 GIFP27352 417 aa9.69□□□□□ -0.86
PTPN7-204ENST00000462815 IL12AP29459 219 aa9.69□□□□□ -0.86
PTPN7-204ENST00000462815 SERPINF1P36955 418 aa9.69□□□□□ -0.86
PTPN7-204ENST00000462815 ACAA2P42765 397 aaKnown RBP9.69□□□□□ -0.86
PTPN7-204ENST00000462815 CDKN2CP42773 168 aa9.69□□□□□ -0.86
PTPN7-204ENST00000462815 SELENOPP49908 381 aa9.69□□□□□ -0.86
PTPN7-204ENST00000462815 PPOXP50336 477 aa9.69□□□□□ -0.86
PTPN7-204ENST00000462815 MAP2K6P52564 334 aa9.69□□□□□ -0.86
PTPN7-204ENST00000462815 MVDP53602 400 aa9.69□□□□□ -0.86
PTPN7-204ENST00000462815 NAAAQ02083 359 aa9.69□□□□□ -0.86
PTPN7-204ENST00000462815 TGFBR3Q03167 851 aa9.69□□□□□ -0.86
PTPN7-204ENST00000462815 HGFACQ04756 655 aa9.69□□□□□ -0.86
PTPN7-204ENST00000462815 CEACAM7Q14002 265 aa9.69□□□□□ -0.86
PTPN7-204ENST00000462815 PDCD2Q16342 344 aaPredicted RBP9.69□□□□□ -0.86
PTPN7-204ENST00000462815 C3orf36Q3SXR2 165 aa9.69□□□□□ -0.86
PTPN7-204ENST00000462815 OTUD3Q5T2D3 398 aaPredicted RBP9.69□□□□□ -0.86
PTPN7-204ENST00000462815 MRPL2Q5T653 305 aaKnown RBP9.69□□□□□ -0.86
PTPN7-204ENST00000462815 ATAD3BQ5T9A4 648 aa9.69□□□□□ -0.86
PTPN7-204ENST00000462815 AGBL2Q5U5Z8 902 aa9.69□□□□□ -0.86
PTPN7-204ENST00000462815 LRRC74BQ6ZQY2 392 aa9.69□□□□□ -0.86
PTPN7-204ENST00000462815 EPHX4Q8IUS5 362 aa9.69□□□□□ -0.86
PTPN7-204ENST00000462815 POMGNT2Q8NAT1 580 aa9.69□□□□□ -0.86
PTPN7-204ENST00000462815 MAGEE2Q8TD90 523 aaPredicted RBP9.69□□□□□ -0.86
PTPN7-204ENST00000462815 BCL2L2Q92843 193 aaPredicted RBP9.69□□□□□ -0.86
PTPN7-204ENST00000462815 PMM1Q92871 262 aa9.69□□□□□ -0.86
PTPN7-204ENST00000462815 TLCD1Q96CP7 247 aa9.69□□□□□ -0.86
PTPN7-204ENST00000462815 SORT1Q99523 831 aa9.69□□□□□ -0.86
PTPN7-204ENST00000462815 SLC35A5Q9BS91 424 aa9.69□□□□□ -0.86
PTPN7-204ENST00000462815 NAA11Q9BSU3 229 aaPredicted RBP9.69□□□□□ -0.86
PTPN7-204ENST00000462815 MYOZ1Q9NP98 299 aaPredicted RBP9.69□□□□□ -0.86
PTPN7-204ENST00000462815 MARCOQ9UEW3 520 aaPredicted RBP9.69□□□□□ -0.86
PTPN7-204ENST00000462815 BTNL2Q9UIR0 455 aa9.69□□□□□ -0.86
PTPN7-204ENST00000462815 HAO1Q9UJM8 370 aa9.69□□□□□ -0.86
PTPN7-204ENST00000462815 TMEM129A0AVI4 362 aa9.68□□□□□ -0.86
PTPN7-204ENST00000462815 LRP5LA4QPB2 252 aa9.68□□□□□ -0.86
PTPN7-204ENST00000462815 CDHR4A6H8M9 788 aa9.68□□□□□ -0.86
PTPN7-204ENST00000462815 TMEM229AB2RXF0 380 aa9.68□□□□□ -0.86
PTPN7-204ENST00000462815 B9A039 149 aa9.68□□□□□ -0.86
PTPN7-204ENST00000462815 FTCDNL1E5RQL4 147 aa9.68□□□□□ -0.86
PTPN7-204ENST00000462815 NR5A2O00482 541 aa9.68□□□□□ -0.86
PTPN7-204ENST00000462815 RGS16O15492 202 aaPredicted RBP9.68□□□□□ -0.86
PTPN7-204ENST00000462815 FRS3O43559 492 aa9.68□□□□□ -0.86
PTPN7-204ENST00000462815 LILRA1O75019 489 aa9.68□□□□□ -0.86
PTPN7-204ENST00000462815 UPK3AO75631 287 aa9.68□□□□□ -0.86
PTPN7-204ENST00000462815 STAMBPO95630 424 aa9.68□□□□□ -0.86
PTPN7-204ENST00000462815 CPSF4O95639 269 aaKnown RBP9.68□□□□□ -0.86
PTPN7-204ENST00000462815 WNT11O96014 354 aa9.68□□□□□ -0.86
PTPN7-204ENST00000462815 PGRP06401 933 aa9.68□□□□□ -0.86
PTPN7-204ENST00000462815 ALDOCP09972 364 aaKnown RBP9.68□□□□□ -0.86
PTPN7-204ENST00000462815 MYZAPP0CAP1 466 aa9.68□□□□□ -0.86
PTPN7-204ENST00000462815 SNRPD2P62316 118 aaKnown RBP9.68□□□□□ -0.86
PTPN7-204ENST00000462815 OR7A5Q15622 319 aa9.68□□□□□ -0.86
PTPN7-204ENST00000462815 CR1LQ2VPA4 569 aa9.68□□□□□ -0.86
PTPN7-204ENST00000462815 GPAT3Q53EU6 434 aa9.68□□□□□ -0.86
PTPN7-204ENST00000462815 TTMPQ5BVD1 217 aa9.68□□□□□ -0.86
PTPN7-204ENST00000462815 COX20Q5RI15 118 aa9.68□□□□□ -0.86
PTPN7-204ENST00000462815 ANXA8L1Q5VT79 327 aa9.68□□□□□ -0.86
PTPN7-204ENST00000462815 ANKRD16Q6P6B7 361 aa9.68□□□□□ -0.86
PTPN7-204ENST00000462815 CREB3L2Q70SY1 520 aa9.68□□□□□ -0.86
PTPN7-204ENST00000462815 AAED1Q7RTV5 226 aa9.68□□□□□ -0.86
PTPN7-204ENST00000462815 RNF130Q86XS8 419 aa9.68□□□□□ -0.86
PTPN7-204ENST00000462815 FAM169BQ8N8A8 192 aa9.68□□□□□ -0.86
PTPN7-204ENST00000462815 NUP37Q8NFH4 326 aa9.68□□□□□ -0.86
PTPN7-204ENST00000462815 WDR60Q8WVS4 1066 aa9.68□□□□□ -0.86
PTPN7-204ENST00000462815 AURKBQ96GD4 344 aaPredicted RBP9.68□□□□□ -0.86
PTPN7-204ENST00000462815 PKNOX2Q96KN3 472 aa9.68□□□□□ -0.86
PTPN7-204ENST00000462815 PPP1R36Q96LQ0 422 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms