RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 TCF4P15884 667 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 ADRA2CP18825 462 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 NT5EP21589 574 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 FCARP24071 287 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 SERPINB6P35237 376 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 RGS7P49802 495 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 SERPINH1P50454 418 aaKnown RBP3.35□□□□□ -1.87
UBA3-204ENST00000461522 BCAP31P51572 246 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 PLK1P53350 603 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 CDH6P55285 790 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 RPL23AP62750 156 aaKnown RBP3.35□□□□□ -1.87
UBA3-204ENST00000461522 GLO1Q04760 184 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 ZNF33AQ06730 810 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 ILF2Q12905 390 aaKnown RBP3.35□□□□□ -1.87
UBA3-204ENST00000461522 SLAQ13239 276 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 ART3Q13508 389 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 HTR4Q13639 388 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 CAPRIN1Q14444 709 aaKnown RBP3.35□□□□□ -1.87
UBA3-204ENST00000461522 PDK2Q15119 407 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 PDK3Q15120 406 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 ZNF77Q15935 545 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 PARP6Q2NL67 630 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 KRTAP13-3Q3SY46 172 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 BEND6Q5SZJ8 279 aaPredicted RBP3.35□□□□□ -1.87
UBA3-204ENST00000461522 LCE3AQ5TA76 89 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 C6orf163Q5TEZ5 329 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 AGBL2Q5U5Z8 902 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 SDHAF4Q5VUM1 108 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 PRAMEF8Q5VWM4 474 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 SYPL2Q5VXT5 272 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 C1orf94Q6P1W5 598 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 TTC27Q6P3X3 843 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 NHLRC1Q6VVB1 395 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 SYT10Q6XYQ8 523 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 FAM183BPQ6ZVS7 135 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 FRA10AC1Q70Z53 315 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 BHLHA15Q7RTS1 189 aaPredicted RBP3.35□□□□□ -1.87
UBA3-204ENST00000461522 PHLDB2Q86SQ0 1253 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 SETD3Q86TU7 594 aaPredicted RBP3.35□□□□□ -1.87
UBA3-204ENST00000461522 RALGPS2Q86X27 583 aaPredicted RBP3.35□□□□□ -1.87
UBA3-204ENST00000461522 PLCZ1Q86YW0 608 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 MISPQ8IVT2 679 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 TIGD4Q8IY51 512 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 ZNF595Q8IYB9 648 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 RCOR2Q8IZ40 523 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 CENPLQ8N0S6 344 aaPredicted RBP3.35□□□□□ -1.87
UBA3-204ENST00000461522 DEFB106AQ8N104 65 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 ZNF781Q8N8C0 355 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 ATP6V0D2Q8N8Y2 350 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 FADS6Q8N9I5 356 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 TSPAN14Q8NG11 270 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 ITFG1Q8TB96 612 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 ZNF596Q8TC21 504 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 FANK1Q8TC84 345 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 DQX1Q8TE96 717 aaKnown RBP3.35□□□□□ -1.87
UBA3-204ENST00000461522 RXFP2Q8WXD0 754 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 ROBO4Q8WZ75 1007 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 CIDECQ96AQ7 238 aaPredicted RBP3.35□□□□□ -1.87
UBA3-204ENST00000461522 RAD51AP1Q96B01 352 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 TCEAL4Q96EI5 215 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 DTD2Q96FN9 168 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 SLC41A3Q96GZ6 507 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 ZNF414Q96IQ9 312 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 PRRC1Q96M27 445 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 GPA33Q99795 319 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 CIB1Q99828 191 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 PRMT1Q99873 361 aaKnown RBP3.35□□□□□ -1.87
UBA3-204ENST00000461522 CITED1Q99966 193 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 INPP5KQ9BT40 448 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 DNTTIP1Q9H147 329 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 OR52A5Q9H2C5 316 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 AUNIPQ9H7T9 357 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 BATF3Q9NR55 127 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 DDIT4Q9NX09 232 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 MRPL39Q9NYK5 338 aaKnown RBP3.35□□□□□ -1.87
UBA3-204ENST00000461522 HAO2Q9NYQ3 351 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 PDP1Q9P0J1 537 aaPredicted RBP3.35□□□□□ -1.87
UBA3-204ENST00000461522 C19orf25Q9UFG5 118 aaPredicted RBP3.35□□□□□ -1.87
UBA3-204ENST00000461522 CHRNA9Q9UGM1 479 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 LSM7Q9UK45 103 aaKnown RBP3.35□□□□□ -1.87
UBA3-204ENST00000461522 RUVBL2Q9Y230 463 aaKnown RBP3.35□□□□□ -1.87
UBA3-204ENST00000461522 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.35□□□□□ -1.87
UBA3-204ENST00000461522 CPQQ9Y646 472 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 F5P12259 2224 aa3.35□□□□□ -1.87
UBA3-204ENST00000461522 PDCD11Q14690 1871 aaKnown RBP3.35□□□□□ -1.87
UBA3-204ENST00000461522 VWA8A3KMH1 1905 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 PTPRSQ13332 1948 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 ABCA7Q8IZY2 2146 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 PRUNE2Q8WUY3 3088 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 FAM240BA0A1B0GVZ2 78 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 TUBAL3A6NHL2 446 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 SHISA7A6NL88 538 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 SNTNA6NMZ2 147 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 PDZK1P1A8MUH7 402 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 CENPBD1B2RD01 187 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 GPR171O14626 319 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 ATP8B1O43520 1251 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 PSTPIP1O43586 416 aa3.34□□□□□ -1.87
UBA3-204ENST00000461522 GATCO43716 136 aaKnown RBP3.34□□□□□ -1.87
UBA3-204ENST00000461522 SNNO75324 88 aaPredicted RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms