RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 MED25Q71SY5 747 aa13.68□□□□□ -0.22
PTPRU-205ENST00000460170 NPRL2Q8WTW4 380 aa13.68□□□□□ -0.22
PTPRU-205ENST00000460170 SLC35A4Q96G79 324 aa13.68□□□□□ -0.22
PTPRU-205ENST00000460170 APMAPQ9HDC9 416 aa13.68□□□□□ -0.22
PTPRU-205ENST00000460170 SLC22A7Q9Y694 548 aa13.68□□□□□ -0.22
PTPRU-205ENST00000460170 MCM3APO60318 1980 aa13.68□□□□□ -0.22
PTPRU-205ENST00000460170 RFXAPO00287 272 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 GALR3O60755 368 aaPredicted RBP13.67□□□□□ -0.22
PTPRU-205ENST00000460170 TP53P04637 393 aaPredicted RBP13.67□□□□□ -0.22
PTPRU-205ENST00000460170 ADH6P28332 368 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 ETV5P41161 510 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 ETV1P50549 477 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 SLC43A2Q8N370 569 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 OR51T1Q8NGJ9 327 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 HMGCLL1Q8TB92 370 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 BORCS8Q96FH0 119 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 BCL2L10Q9HD36 194 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 HS3ST3A1Q9Y663 406 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 KIAA1217Q5T5P2 1943 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 H7C1C5 153 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 HCRTR1O43613 425 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 GPX5O75715 221 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 DCNP07585 359 aaKnown RBP13.67□□□□□ -0.22
PTPRU-205ENST00000460170 EN2P19622 333 aaPredicted RBP13.67□□□□□ -0.22
PTPRU-205ENST00000460170 PER3P56645 1201 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 LCN6P62502 163 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 SPOCK1Q08629 439 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 IL22RA1Q8N6P7 574 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 ZSCAN4Q8NAM6 433 aaPredicted RBP13.67□□□□□ -0.22
PTPRU-205ENST00000460170 SLC37A2Q8TED4 501 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 ASB12Q8WXK4 309 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 SLC25A46Q96AG3 418 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 PSD2Q9BQI7 771 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 MFFQ9GZY8 342 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 ATP13A2Q9NQ11 1180 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 ZNF226Q9NYT6 803 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 ARFGEF1Q9Y6D6 1849 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 IGLV3-16A0A075B6K0 115 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 POM121BA6NF01 834 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 CLDN12P56749 244 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 CXADRP78310 365 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 PSPHP78330 225 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 USP51Q70EK9 711 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 CADM3Q8N126 398 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 LGALS14Q8TCE9 139 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 LCORQ96JN0 433 aaPredicted RBP13.67□□□□□ -0.22
PTPRU-205ENST00000460170 OCEL1Q9H607 264 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 ICKQ9UPZ9 632 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 ZFAND5O76080 213 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 CD14P08571 375 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 CXCL12P48061 93 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 SLC14A1Q13336 389 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 ABHD12BQ7Z5M8 362 aaPredicted RBP13.67□□□□□ -0.22
PTPRU-205ENST00000460170 ZNF100Q8IYN0 542 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 SLC46A1Q96NT5 459 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 PRRT1Q99946 306 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 WASF3Q9UPY6 502 aa13.67□□□□□ -0.22
PTPRU-205ENST00000460170 TMEM212A6NML5 194 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 LCATP04180 440 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 THBS1P07996 1170 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 ZNF806P0C7X5 589 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 UQCRC1P31930 480 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 MEF2DQ14814 521 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 Q499Y3 187 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 CCSAPQ6IQ19 270 aaPredicted RBP13.66□□□□□ -0.22
PTPRU-205ENST00000460170 DPY19L4Q7Z388 723 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 CMIPQ8IY22 773 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 NINJ1Q92982 152 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 TXNDC15Q96J42 360 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 OSGIN1Q9UJX0 560 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 ARRDC5A6NEK1 342 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 GDNFP39905 211 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 KIAA0040Q15053 153 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 CDK10Q15131 360 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 ARHGAP11BQ3KRB8 267 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 GLB1L2Q8IW92 636 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 TMEM106AQ96A25 262 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 PPIL1Q9Y3C6 166 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 TRBV11-1A0A0K0K1C0 115 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 ZNF593O00488 134 aaPredicted RBP13.66□□□□□ -0.22
PTPRU-205ENST00000460170 GAPDHSO14556 408 aaPredicted RBP13.66□□□□□ -0.22
PTPRU-205ENST00000460170 PEX14O75381 377 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 CHRM4P08173 479 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 PSMB1P20618 241 aaKnown RBP13.66□□□□□ -0.22
PTPRU-205ENST00000460170 THBS2P35442 1172 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 TPMTP51580 245 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 SLC35D2Q76EJ3 337 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 MSRB3Q8IXL7 192 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 ELSPBP1Q96BH3 223 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 GIMAP5Q96F15 307 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 OR14A2Q96R54 314 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 POU2F3Q9UKI9 436 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 PAPPA2Q9BXP8 1791 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 SLC43A1O75387 559 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 SPDEFO95238 335 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 HTR3BO95264 441 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 UTS2O95399 124 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 BMP1P13497 986 aa13.66□□□□□ -0.22
PTPRU-205ENST00000460170 TAS2R19P59542 299 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms