RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 LIPHQ8WWY8 451 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 HIST1H2ACQ93077 130 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 KLHL15Q96M94 604 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 MBOAT4Q96T53 435 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 GABARAPL3Q9BY60 117 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 LIPGQ9Y5X9 500 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 TRAV27A0A087WT01 109 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 HCN1O60741 890 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 CRYABP02511 175 aaKnown RBP17.57■□□□□ 0.4
SGCE-207ENST00000447873 IMPDH2P12268 514 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 POU1F1P28069 291 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 POLR2IP36954 125 aaKnown RBP17.57■□□□□ 0.4
SGCE-207ENST00000447873 ESRRGP62508 458 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 OR7A5Q15622 319 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 ZBED5Q49AG3 693 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 ZNF620Q6ZNG0 422 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 DHRSXQ8N5I4 330 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 EXD3Q8N9H8 876 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 TEX19Q8NA77 164 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 ZNF555Q8NEP9 628 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 CYGBQ8WWM9 190 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 ABTB1Q969K4 478 aaPredicted RBP17.57■□□□□ 0.4
SGCE-207ENST00000447873 ADI1Q9BV57 179 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 ASPNQ9BXN1 380 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 EGLN3Q9H6Z9 239 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 SIGLEC7Q9Y286 467 aa17.57■□□□□ 0.4
SGCE-207ENST00000447873 LIPT2A6NK58 231 aa17.56■□□□□ 0.4
SGCE-207ENST00000447873 FTCDNL1E5RQL4 147 aa17.56■□□□□ 0.4
SGCE-207ENST00000447873 SULT2B1O00204 365 aa17.56■□□□□ 0.4
SGCE-207ENST00000447873 SEC14L5O43304 696 aa17.56■□□□□ 0.4
SGCE-207ENST00000447873 RCBTB2O95199 551 aa17.56■□□□□ 0.4
SGCE-207ENST00000447873 ACTL6AO96019 429 aa17.56■□□□□ 0.4
SGCE-207ENST00000447873 ASAH2BP0C7U1 165 aa17.56■□□□□ 0.4
SGCE-207ENST00000447873 BMP7P18075 431 aa17.56■□□□□ 0.4
SGCE-207ENST00000447873 GRPRP30550 384 aa17.56■□□□□ 0.4
SGCE-207ENST00000447873 CRISP1P54107 249 aa17.56■□□□□ 0.4
SGCE-207ENST00000447873 C19orf57Q0VDD7 668 aa17.56■□□□□ 0.4
SGCE-207ENST00000447873 WLSQ5T9L3 541 aa17.56■□□□□ 0.4
SGCE-207ENST00000447873 TMPPEQ6ZT21 453 aa17.56■□□□□ 0.4
SGCE-207ENST00000447873 ESPNLQ6ZVH7 1005 aa17.56■□□□□ 0.4
SGCE-207ENST00000447873 TRILQ7L0X0 811 aa17.56■□□□□ 0.4
SGCE-207ENST00000447873 KIF18BQ86Y91 864 aa17.56■□□□□ 0.4
SGCE-207ENST00000447873 UBQLNLQ8IYU4 475 aa17.56■□□□□ 0.4
SGCE-207ENST00000447873 TEX47Q8TBZ9 253 aa17.56■□□□□ 0.4
SGCE-207ENST00000447873 FANK1Q8TC84 345 aa17.56■□□□□ 0.4
SGCE-207ENST00000447873 TNFRSF13CQ96RJ3 184 aa17.56■□□□□ 0.4
SGCE-207ENST00000447873 SLC25A18Q9H1K4 315 aa17.56■□□□□ 0.4
SGCE-207ENST00000447873 IL20Q9NYY1 176 aa17.56■□□□□ 0.4
SGCE-207ENST00000447873 CORINQ9Y5Q5 1042 aa17.56■□□□□ 0.4
SGCE-207ENST00000447873 CDH10Q9Y6N8 788 aa17.56■□□□□ 0.4
SGCE-207ENST00000447873 TLN1Q9Y490 2541 aaKnown RBP17.55■□□□□ 0.4
SGCE-207ENST00000447873 NPIPA5E9PKD4 350 aa17.55■□□□□ 0.4
SGCE-207ENST00000447873 BLOC1S5-TXNDC5H3BN57 136 aa17.55■□□□□ 0.4
SGCE-207ENST00000447873 EIF1AYO14602 144 aaKnown RBP17.55■□□□□ 0.4
SGCE-207ENST00000447873 PTP4A3O75365 173 aa17.55■□□□□ 0.4
SGCE-207ENST00000447873 IGHG3P01860 377 aa17.55■□□□□ 0.4
SGCE-207ENST00000447873 TP53P04637 393 aaPredicted RBP17.55■□□□□ 0.4
SGCE-207ENST00000447873 IGFBP1P08833 259 aaPredicted RBP17.55■□□□□ 0.4
SGCE-207ENST00000447873 SFTPCP11686 197 aa17.55■□□□□ 0.4
SGCE-207ENST00000447873 DIO1P49895 249 aa17.55■□□□□ 0.4
SGCE-207ENST00000447873 CLDN20P56880 219 aa17.55■□□□□ 0.4
SGCE-207ENST00000447873 OR2B6P58173 313 aa17.55■□□□□ 0.4
SGCE-207ENST00000447873 C6orf52Q5T4I8 152 aa17.55■□□□□ 0.4
SGCE-207ENST00000447873 RPL13AP3Q6NVV1 102 aa17.55■□□□□ 0.4
SGCE-207ENST00000447873 SMARCD3Q6STE5 483 aa17.55■□□□□ 0.4
SGCE-207ENST00000447873 FAM180AQ6UWF9 173 aa17.55■□□□□ 0.4
SGCE-207ENST00000447873 NANOGNBQ7Z5D8 188 aa17.55■□□□□ 0.4
SGCE-207ENST00000447873 GGNQ86UU5 652 aa17.55■□□□□ 0.4
SGCE-207ENST00000447873 CLDN22Q8N7P3 220 aa17.55■□□□□ 0.4
SGCE-207ENST00000447873 OSTF1Q92882 214 aa17.55■□□□□ 0.4
SGCE-207ENST00000447873 MIB2Q96AX9 1013 aa17.55■□□□□ 0.4
SGCE-207ENST00000447873 CNTNAP3BQ96NU0 1288 aa17.55■□□□□ 0.4
SGCE-207ENST00000447873 CNTNAP3Q9BZ76 1288 aa17.55■□□□□ 0.4
SGCE-207ENST00000447873 GRIP2Q9C0E4 1043 aa17.55■□□□□ 0.4
SGCE-207ENST00000447873 OR52D1Q9H346 318 aa17.55■□□□□ 0.4
SGCE-207ENST00000447873 FAM118AQ9NWS6 357 aa17.55■□□□□ 0.4
SGCE-207ENST00000447873 ALKBH4Q9NXW9 302 aa17.55■□□□□ 0.4
SGCE-207ENST00000447873 NPIPA1Q9UND3 350 aa17.55■□□□□ 0.4
SGCE-207ENST00000447873 TRAPPC4Q9Y296 219 aa17.55■□□□□ 0.4
SGCE-207ENST00000447873 A0A0J9YW62 118 aa17.54■□□□□ 0.4
SGCE-207ENST00000447873 TNFSF11O14788 317 aa17.54■□□□□ 0.4
SGCE-207ENST00000447873 PMS2P2O95744 297 aa17.54■□□□□ 0.4
SGCE-207ENST00000447873 EPHA2P29317 976 aa17.54■□□□□ 0.4
SGCE-207ENST00000447873 LHX2P50458 406 aa17.54■□□□□ 0.4
SGCE-207ENST00000447873 CSNK2A1P68400 391 aaPredicted RBP17.54■□□□□ 0.4
SGCE-207ENST00000447873 SLC35A1P78382 337 aa17.54■□□□□ 0.4
SGCE-207ENST00000447873 PMS2P3Q13401 168 aa17.54■□□□□ 0.4
SGCE-207ENST00000447873 ANKDD1AQ495B1 522 aa17.54■□□□□ 0.4
SGCE-207ENST00000447873 GXYLT1Q4G148 440 aa17.54■□□□□ 0.4
SGCE-207ENST00000447873 TTC23Q5W5X9 447 aa17.54■□□□□ 0.4
SGCE-207ENST00000447873 SIAH3Q8IW03 269 aa17.54■□□□□ 0.4
SGCE-207ENST00000447873 Q8NA96 180 aa17.54■□□□□ 0.4
SGCE-207ENST00000447873 OR52L1Q8NGH7 329 aa17.54■□□□□ 0.4
SGCE-207ENST00000447873 OR5J2Q8NH18 312 aa17.54■□□□□ 0.4
SGCE-207ENST00000447873 SAMD8Q96LT4 415 aa17.54■□□□□ 0.4
SGCE-207ENST00000447873 ZNF570Q96NI8 536 aa17.54■□□□□ 0.4
SGCE-207ENST00000447873 PLA2G12AQ9BZM1 189 aa17.54■□□□□ 0.4
SGCE-207ENST00000447873 MCCC2Q9HCC0 563 aa17.54■□□□□ 0.4
SGCE-207ENST00000447873 TBC1D23Q9NUY8 699 aa17.54■□□□□ 0.4
SGCE-207ENST00000447873 IL20RAQ9UHF4 553 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms