RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 KLK2P20151 261 aa3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 IL10P22301 178 aa3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 DNAJB1P25685 340 aa3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 PSMA2P25787 234 aa3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 GDF1P27539 372 aa3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 CDH5P33151 784 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 PHBP35232 272 aa3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 HTR5AP47898 357 aa3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 MYL6P60660 151 aa3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 CCNA1P78396 465 aa3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 CNTN2Q02246 1040 aa3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 IFT88Q13099 833 aa3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 IL18R1Q13478 541 aa3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 ITIH4Q14624 930 aa3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 RFTN1Q14699 578 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 CEBPEQ15744 281 aa3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 TFDP3Q5H9I0 405 aa3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 CELF3Q5SZQ8 465 aaKnown RBP3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 ATF7IP2Q5U623 682 aa3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 BTNL3Q6UXE8 466 aa3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 C2orf66Q6UXQ4 117 aa3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 SCARA5Q6ZMJ2 495 aa3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 CENPUQ71F23 418 aa3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 GPR137CQ8N3F9 429 aa3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 OR5B17Q8NGF7 314 aa3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 TFB1MQ8WVM0 346 aaKnown RBP3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 ZNF606Q8WXB4 792 aa3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 RAPGEF5Q92565 580 aa3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 VSIG2Q96IQ7 327 aa3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 TM2D1Q9BX74 207 aa3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 NFKBIZQ9BYH8 718 aa3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 OPN3Q9H1Y3 402 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 C1orf21Q9H246 121 aa3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 CYP3A43Q9HB55 503 aa3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 TRPV5Q9NQA5 729 aa3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 CISHQ9NSE2 258 aa3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 NKIRAS1Q9NYS0 192 aa3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 DUSP12Q9UNI6 340 aa3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 EXOSC1Q9Y3B2 195 aaKnown RBP3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 GOLGB1Q14789 3259 aaKnown RBP3.3□□□□□ -1.88
HMGB3P6-201ENST00000444896 hCG_1818297A0A087WSY0 165 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 EXOC1LA0A1B0GW35 172 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 SIGLEC16A6NMB1 481 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 GOLGA8SH3BPF8 625 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 H3BTX0 84 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 M0QYV0 167 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 SGK1O00141 431 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 LGALS8O00214 317 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 NUDT21O43809 227 aaKnown RBP3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 FAM189A1O60320 539 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 CNMDO75829 334 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 APBB3O95704 486 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 SHBGP04278 402 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 LGALS2P05162 132 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 CXCL8P10145 99 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 TNFSF9P41273 254 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 SLCO1A2P46721 670 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 IL9RQ01113 521 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 TMED2Q15363 201 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 TRIP13Q15645 432 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 CDKN3Q16667 212 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 GSG1Q2KHT4 349 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 KLHL38Q2WGJ6 581 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 ADPRMQ3LIE5 342 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 DCAF4L1Q3SXM0 396 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 HSDL1Q3SXM5 330 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 TNFAIP8L3Q5GJ75 292 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 TOR1AIP1Q5JTV8 583 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 LGSNQ5TDP6 509 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 ZNF57Q68EA5 555 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 RAET1GQ6H3X3 334 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 IRGCQ6NXR0 463 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 Q7L0L9 218 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 FBXO16Q8IX29 292 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 C11orf53Q8IXP5 236 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 CNPY4Q8N129 248 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 C11orf42Q8N5U0 333 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 ALLCQ8N6M5 410 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 OR52B4Q8NGK2 314 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 ADAMTS16Q8TE57 1224 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 FCGR1BQ92637 280 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 OPTNQ96CV9 577 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 CASD1Q96PB1 797 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 LHX5Q9H2C1 402 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 ASB7Q9H672 318 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 KAT8Q9H7Z6 458 aaKnown RBP3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 EXOSC3Q9NQT5 275 aaKnown RBP3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 PSMC3IPQ9P2W1 217 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 SLC2A6Q9UGQ3 507 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 LGALS13Q9UHV8 139 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 KIAA1257Q9ULG3 409 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 CLCA3PQ9Y6N3 262 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 KIF25-AS1Q9Y6Z4 181 aa3.29□□□□□ -1.88
HMGB3P6-201ENST00000444896 TMEM120BA0PK00 339 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 FAM47DPA6NHR8 397 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 KRTAP9-6A8MVA2 160 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 ANKRD65E5RJM6 399 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 APOC4-APOC2K7ER74 178 aa3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 CDX4O14627 284 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P6-201ENST00000444896 LATO43561 262 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms