RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 PPA1Q15181 289 aa16.61■□□□□ 0.25
ATPAF2-201ENST00000444058 HSP90B2PQ58FF3 399 aa16.61■□□□□ 0.25
ATPAF2-201ENST00000444058 COQ5Q5HYK3 327 aa16.61■□□□□ 0.25
ATPAF2-201ENST00000444058 FAM91A1Q658Y4 838 aa16.61■□□□□ 0.25
ATPAF2-201ENST00000444058 TMEM225Q6GV28 225 aa16.61■□□□□ 0.25
ATPAF2-201ENST00000444058 ULK3Q6PHR2 472 aa16.61■□□□□ 0.25
ATPAF2-201ENST00000444058 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.61■□□□□ 0.25
ATPAF2-201ENST00000444058 NET1Q7Z628 596 aaPredicted RBP16.61■□□□□ 0.25
ATPAF2-201ENST00000444058 PTOV1Q86YD1 416 aa16.61■□□□□ 0.25
ATPAF2-201ENST00000444058 ARMC8Q8IUR7 673 aa16.61■□□□□ 0.25
ATPAF2-201ENST00000444058 SLC30A8Q8IWU4 369 aa16.61■□□□□ 0.25
ATPAF2-201ENST00000444058 OR9K2Q8NGE7 335 aa16.61■□□□□ 0.25
ATPAF2-201ENST00000444058 IGFBPL1Q8WX77 278 aa16.61■□□□□ 0.25
ATPAF2-201ENST00000444058 MUS81Q96NY9 551 aa16.61■□□□□ 0.25
ATPAF2-201ENST00000444058 CCDC134Q9H6E4 229 aa16.61■□□□□ 0.25
ATPAF2-201ENST00000444058 KAT8Q9H7Z6 458 aaKnown RBP16.61■□□□□ 0.25
ATPAF2-201ENST00000444058 MED4Q9NPJ6 270 aa16.61■□□□□ 0.25
ATPAF2-201ENST00000444058 ADPRHL2Q9NX46 363 aa16.61■□□□□ 0.25
ATPAF2-201ENST00000444058 RNF115Q9Y4L5 304 aa16.61■□□□□ 0.25
ATPAF2-201ENST00000444058 RAI1Q7Z5J4 1906 aaPredicted RBP16.6■□□□□ 0.25
ATPAF2-201ENST00000444058 ELOA3DA6NLF2 546 aaPredicted RBP16.6■□□□□ 0.25
ATPAF2-201ENST00000444058 FTCDNL1E5RQL4 147 aa16.6■□□□□ 0.25
ATPAF2-201ENST00000444058 HS3ST1O14792 307 aa16.6■□□□□ 0.25
ATPAF2-201ENST00000444058 OR2T1O43869 369 aa16.6■□□□□ 0.25
ATPAF2-201ENST00000444058 TPST1O60507 370 aa16.6■□□□□ 0.25
ATPAF2-201ENST00000444058 NPPAP01160 153 aa16.6■□□□□ 0.25
ATPAF2-201ENST00000444058 IGHV3-9P01782 118 aa16.6■□□□□ 0.25
ATPAF2-201ENST00000444058 CD3EP07766 207 aa16.6■□□□□ 0.25
ATPAF2-201ENST00000444058 P2RY4P51582 365 aa16.6■□□□□ 0.25
ATPAF2-201ENST00000444058 ARFIP2P53365 341 aa16.6■□□□□ 0.25
ATPAF2-201ENST00000444058 NKX6-1P78426 367 aaPredicted RBP16.6■□□□□ 0.25
ATPAF2-201ENST00000444058 HOXC5Q00444 222 aa16.6■□□□□ 0.25
ATPAF2-201ENST00000444058 EGR4Q05215 589 aa16.6■□□□□ 0.25
ATPAF2-201ENST00000444058 CAPRIN1Q14444 709 aaKnown RBP16.6■□□□□ 0.25
ATPAF2-201ENST00000444058 CYP51A1Q16850 503 aa16.6■□□□□ 0.25
ATPAF2-201ENST00000444058 ELOA3BQ3SY89 546 aa16.6■□□□□ 0.25
ATPAF2-201ENST00000444058 PRSS57Q6UWY2 283 aa16.6■□□□□ 0.25
ATPAF2-201ENST00000444058 CASP12Q6UXS9 341 aa16.6■□□□□ 0.25
ATPAF2-201ENST00000444058 COMTD1Q86VU5 262 aa16.6■□□□□ 0.25
ATPAF2-201ENST00000444058 ZIC4Q8N9L1 334 aa16.6■□□□□ 0.25
ATPAF2-201ENST00000444058 ELOA3Q8NG57 546 aa16.6■□□□□ 0.25
ATPAF2-201ENST00000444058 OR52E4Q8NGH9 312 aa16.6■□□□□ 0.25
ATPAF2-201ENST00000444058 AMBRA1Q9C0C7 1298 aa16.6■□□□□ 0.25
ATPAF2-201ENST00000444058 FGFR1OP2Q9NVK5 253 aa16.6■□□□□ 0.25
ATPAF2-201ENST00000444058 SLC13A4Q9UKG4 626 aa16.6■□□□□ 0.25
ATPAF2-201ENST00000444058 RASD1Q9Y272 281 aa16.6■□□□□ 0.25
ATPAF2-201ENST00000444058 PRR14LQ5THK1 2151 aa16.6■□□□□ 0.25
ATPAF2-201ENST00000444058 A0A1B0GWA3 101 aa16.59■□□□□ 0.25
ATPAF2-201ENST00000444058 PLAUP00749 431 aa16.59■□□□□ 0.25
ATPAF2-201ENST00000444058 C8BP07358 591 aa16.59■□□□□ 0.25
ATPAF2-201ENST00000444058 PAX1P15863 534 aa16.59■□□□□ 0.25
ATPAF2-201ENST00000444058 HTR2AP28223 471 aa16.59■□□□□ 0.25
ATPAF2-201ENST00000444058 AQP1P29972 269 aa16.59■□□□□ 0.25
ATPAF2-201ENST00000444058 MTPNP58546 118 aa16.59■□□□□ 0.25
ATPAF2-201ENST00000444058 TGFBR3Q03167 851 aa16.59■□□□□ 0.25
ATPAF2-201ENST00000444058 FAPQ12884 760 aa16.59■□□□□ 0.25
ATPAF2-201ENST00000444058 FOXD4Q12950 439 aaPredicted RBP16.59■□□□□ 0.25
ATPAF2-201ENST00000444058 CYLC2Q14093 348 aaPredicted RBP16.59■□□□□ 0.25
ATPAF2-201ENST00000444058 STK11Q15831 433 aa16.59■□□□□ 0.25
ATPAF2-201ENST00000444058 TRMT5Q32P41 509 aaKnown RBP16.59■□□□□ 0.25
ATPAF2-201ENST00000444058 ALG10BQ5I7T1 473 aa16.59■□□□□ 0.25
ATPAF2-201ENST00000444058 SWT1Q5T5J6 900 aaKnown RBP16.59■□□□□ 0.25
ATPAF2-201ENST00000444058 ALKBH2Q6NS38 261 aa16.59■□□□□ 0.25
ATPAF2-201ENST00000444058 KRTAP1-3Q8IUG1 177 aa16.59■□□□□ 0.25
ATPAF2-201ENST00000444058 C17orf78Q8N4C9 275 aa16.59■□□□□ 0.25
ATPAF2-201ENST00000444058 POMGNT2Q8NAT1 580 aa16.59■□□□□ 0.25
ATPAF2-201ENST00000444058 C1orf162Q8NEQ5 155 aaPredicted RBP16.59■□□□□ 0.25
ATPAF2-201ENST00000444058 SLC38A4Q969I6 547 aa16.59■□□□□ 0.25
ATPAF2-201ENST00000444058 BOD1Q96IK1 185 aa16.59■□□□□ 0.25
ATPAF2-201ENST00000444058 SH3GL1Q99961 368 aa16.59■□□□□ 0.25
ATPAF2-201ENST00000444058 PTDSS2Q9BVG9 487 aa16.59■□□□□ 0.25
ATPAF2-201ENST00000444058 TMEM27Q9HBJ8 222 aa16.59■□□□□ 0.25
ATPAF2-201ENST00000444058 DLL4Q9NR61 685 aa16.59■□□□□ 0.25
ATPAF2-201ENST00000444058 CIB4A0PJX0 185 aa16.58■□□□□ 0.24
ATPAF2-201ENST00000444058 OR6C65A6NJZ3 312 aa16.58■□□□□ 0.24
ATPAF2-201ENST00000444058 CCT8L1PA6NM43 557 aa16.58■□□□□ 0.24
ATPAF2-201ENST00000444058 FBP2O00757 339 aa16.58■□□□□ 0.24
ATPAF2-201ENST00000444058 FMO6PO60774 539 aa16.58■□□□□ 0.24
ATPAF2-201ENST00000444058 RAD51DO75771 328 aa16.58■□□□□ 0.24
ATPAF2-201ENST00000444058 RGS8P57771 180 aaPredicted RBP16.58■□□□□ 0.24
ATPAF2-201ENST00000444058 NCALDP61601 193 aa16.58■□□□□ 0.24
ATPAF2-201ENST00000444058 BSPH1Q075Z2 132 aa16.58■□□□□ 0.24
ATPAF2-201ENST00000444058 DMTNQ08495 405 aa16.58■□□□□ 0.24
ATPAF2-201ENST00000444058 SELPLGQ14242 412 aa16.58■□□□□ 0.24
ATPAF2-201ENST00000444058 MAPRE2Q15555 327 aa16.58■□□□□ 0.24
ATPAF2-201ENST00000444058 GABRA6Q16445 453 aa16.58■□□□□ 0.24
ATPAF2-201ENST00000444058 GLIPR1L2Q4G1C9 344 aa16.58■□□□□ 0.24
ATPAF2-201ENST00000444058 FAM69AQ5T7M9 428 aa16.58■□□□□ 0.24
ATPAF2-201ENST00000444058 AAED1Q7RTV5 226 aa16.58■□□□□ 0.24
ATPAF2-201ENST00000444058 PATL1Q86TB9 770 aaKnown RBP16.58■□□□□ 0.24
ATPAF2-201ENST00000444058 GPAT4Q86UL3 456 aa16.58■□□□□ 0.24
ATPAF2-201ENST00000444058 WFDC11Q8NEX6 87 aa16.58■□□□□ 0.24
ATPAF2-201ENST00000444058 OR6S1Q8NH40 331 aa16.58■□□□□ 0.24
ATPAF2-201ENST00000444058 AKAP1Q92667 903 aaKnown RBP eCLIP16.58■□□□□ 0.24
ATPAF2-201ENST00000444058 SLC47A1Q96FL8 570 aa16.58■□□□□ 0.24
ATPAF2-201ENST00000444058 RADILQ96JH8 1075 aa16.58■□□□□ 0.24
ATPAF2-201ENST00000444058 ZNF385AQ96PM9 386 aaKnown RBP16.58■□□□□ 0.24
ATPAF2-201ENST00000444058 GSX2Q9BZM3 304 aa16.58■□□□□ 0.24
ATPAF2-201ENST00000444058 SAR1AQ9NR31 198 aa16.58■□□□□ 0.24
ATPAF2-201ENST00000444058 SLC7A10Q9NS82 523 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms