RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 CCDC190Q86UF4 302 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 EGFL6Q8IUX8 553 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 CPOQ8IVL8 374 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 MISPQ8IVT2 679 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 TMEM151BQ8IW70 566 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 CADM2Q8N3J6 435 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 METTL27Q8N6F8 245 aaPredicted RBP8.36□□□□□ -1.07
HDAC6-209ENST00000440653 ZNF485Q8NCK3 441 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 ATP6V1C2Q8NEY4 427 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 ELOA3Q8NG57 546 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 OR1L3Q8NH93 324 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 SETD6Q8TBK2 473 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 LIPHQ8WWY8 451 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 KISS1RQ969F8 398 aaPredicted RBP8.36□□□□□ -1.07
HDAC6-209ENST00000440653 C3orf49Q96BT1 292 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 TMCO6Q96DC7 493 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 SECISBP2Q96T21 854 aaKnown RBP8.36□□□□□ -1.07
HDAC6-209ENST00000440653 SLC30A2Q9BRI3 323 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 TGIF2Q9GZN2 237 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 SPRTNQ9H040 489 aaPredicted RBP8.36□□□□□ -1.07
HDAC6-209ENST00000440653 MEPEQ9NQ76 525 aaPredicted RBP8.36□□□□□ -1.07
HDAC6-209ENST00000440653 TXNL4BQ9NX01 149 aaKnown RBP8.36□□□□□ -1.07
HDAC6-209ENST00000440653 ADAM30Q9UKF2 790 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 TRAPPC4Q9Y296 219 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 PCDHGB7Q9Y5F8 929 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 NOX1Q9Y5S8 564 aa8.36□□□□□ -1.07
HDAC6-209ENST00000440653 IGLV3-12A0A075B6K2 115 aa8.35□□□□□ -1.07
HDAC6-209ENST00000440653 SLC35F4A4IF30 521 aa8.35□□□□□ -1.07
HDAC6-209ENST00000440653 CCDC182A6NF36 153 aa8.35□□□□□ -1.07
HDAC6-209ENST00000440653 HRKO00198 91 aa8.35□□□□□ -1.07
HDAC6-209ENST00000440653 SOCS6O14544 535 aa8.35□□□□□ -1.07
HDAC6-209ENST00000440653 IMPA2O14732 288 aa8.35□□□□□ -1.07
HDAC6-209ENST00000440653 ZNF264O43296 627 aa8.35□□□□□ -1.07
HDAC6-209ENST00000440653 EIF4E2O60573 245 aaKnown RBP8.35□□□□□ -1.07
HDAC6-209ENST00000440653 PTP4A3O75365 173 aa8.35□□□□□ -1.07
HDAC6-209ENST00000440653 RGS9O75916 674 aaPredicted RBP8.35□□□□□ -1.07
HDAC6-209ENST00000440653 DDAH2O95865 285 aa8.35□□□□□ -1.07
HDAC6-209ENST00000440653 ITGB2P05107 769 aa8.35□□□□□ -1.07
HDAC6-209ENST00000440653 SLC2A5P22732 501 aa8.35□□□□□ -1.07
HDAC6-209ENST00000440653 F8A1P23610 371 aa8.35□□□□□ -1.07
HDAC6-209ENST00000440653 PTBP1P26599 531 aaKnown RBP eCLIP8.35□□□□□ -1.07
HDAC6-209ENST00000440653 TGFBR1P36897 503 aa8.35□□□□□ -1.07
HDAC6-209ENST00000440653 GRK6P43250 576 aa8.35□□□□□ -1.07
HDAC6-209ENST00000440653 RPS3AP61247 264 aaKnown RBP8.35□□□□□ -1.07
HDAC6-209ENST00000440653 RPS7P62081 194 aaKnown RBP8.35□□□□□ -1.07
HDAC6-209ENST00000440653 PLCXD2Q0VAA5 305 aa8.35□□□□□ -1.07
HDAC6-209ENST00000440653 CDC20Q12834 499 aa8.35□□□□□ -1.07
HDAC6-209ENST00000440653 GALEQ14376 348 aa8.35□□□□□ -1.07
HDAC6-209ENST00000440653 DDI2Q5TDH0 399 aa8.35□□□□□ -1.07
HDAC6-209ENST00000440653 ZNF787Q6DD87 383 aa8.35□□□□□ -1.07
HDAC6-209ENST00000440653 TMEM71Q6P5X7 295 aa8.35□□□□□ -1.07
HDAC6-209ENST00000440653 PAQR6Q6TCH4 344 aa8.35□□□□□ -1.07
HDAC6-209ENST00000440653 MEX3DQ86XN8 651 aaKnown RBP8.35□□□□□ -1.07
HDAC6-209ENST00000440653 GATAD2AQ86YP4 633 aa8.35□□□□□ -1.07
HDAC6-209ENST00000440653 SIRT6Q8N6T7 355 aa8.35□□□□□ -1.07
HDAC6-209ENST00000440653 DRAXINQ8NBI3 349 aaPredicted RBP8.35□□□□□ -1.07
HDAC6-209ENST00000440653 OR4N2Q8NGD1 307 aa8.35□□□□□ -1.07
HDAC6-209ENST00000440653 OR51G2Q8NGK0 314 aa8.35□□□□□ -1.07
HDAC6-209ENST00000440653 PTPMT1Q8WUK0 201 aaPredicted RBP8.35□□□□□ -1.07
HDAC6-209ENST00000440653 KCNE4Q8WWG9 221 aa8.35□□□□□ -1.07
HDAC6-209ENST00000440653 TM9SF4Q92544 642 aa8.35□□□□□ -1.07
HDAC6-209ENST00000440653 ABTB1Q969K4 478 aaPredicted RBP8.35□□□□□ -1.07
HDAC6-209ENST00000440653 CCDC74AQ96AQ1 378 aa8.35□□□□□ -1.07
HDAC6-209ENST00000440653 ZNF501Q96CX3 271 aaPredicted RBP8.35□□□□□ -1.07
HDAC6-209ENST00000440653 SENP5Q96HI0 755 aaPredicted RBP8.35□□□□□ -1.07
HDAC6-209ENST00000440653 CNN2Q99439 309 aaKnown RBP8.35□□□□□ -1.07
HDAC6-209ENST00000440653 ALG8Q9BVK2 526 aa8.35□□□□□ -1.07
HDAC6-209ENST00000440653 LAT2Q9GZY6 243 aa8.35□□□□□ -1.07
HDAC6-209ENST00000440653 MCCC2Q9HCC0 563 aa8.35□□□□□ -1.07
HDAC6-209ENST00000440653 ATP13A2Q9NQ11 1180 aa8.35□□□□□ -1.07
HDAC6-209ENST00000440653 PNO1Q9NRX1 252 aaKnown RBP8.35□□□□□ -1.07
HDAC6-209ENST00000440653 FGF21Q9NSA1 209 aa8.35□□□□□ -1.07
HDAC6-209ENST00000440653 RYDENQ9NUL5 291 aaKnown RBP8.35□□□□□ -1.07
HDAC6-209ENST00000440653 CHRNA9Q9UGM1 479 aa8.35□□□□□ -1.07
HDAC6-209ENST00000440653 CMAHPQ9Y471 501 aa8.35□□□□□ -1.07
HDAC6-209ENST00000440653 TMEM184BQ9Y519 407 aaPredicted RBP8.35□□□□□ -1.07
HDAC6-209ENST00000440653 FER1L5A0AVI2 2057 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 F8P00451 2351 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 hCG_2014768A0A024R1R8 64 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 TRAV27A0A087WT01 109 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 A0A1B0GTQ1 180 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 DAPL1A0PJW8 107 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 C12orf71A8MTZ7 269 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 ALG1L2C9J202 215 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 PLD2O14939 933 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 RFPL3O75679 317 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 UTS2O95399 124 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 PPP1R3DO95685 299 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 APOA1P02647 267 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 GIMD1P0DJR0 217 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 SDC2P34741 201 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 SEPHS1P49903 392 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 BCAP31P51572 246 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 PNLIPRP2P54317 469 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 SUMO3P55854 103 aaPredicted RBP8.34□□□□□ -1.07
HDAC6-209ENST00000440653 NRG3P56975 720 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 RPS25P62851 125 aaKnown RBP8.34□□□□□ -1.07
HDAC6-209ENST00000440653 PPP3R1P63098 170 aa8.34□□□□□ -1.07
HDAC6-209ENST00000440653 MRPL28Q13084 256 aaKnown RBP8.34□□□□□ -1.07
HDAC6-209ENST00000440653 EFR3AQ14156 821 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms