RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 SLC6A8P48029 635 aa9.08□□□□□ -0.96
CBX5-202ENST00000439541 SOX8P57073 446 aa9.08□□□□□ -0.96
CBX5-202ENST00000439541 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.08□□□□□ -0.96
CBX5-202ENST00000439541 MFAP5Q13361 173 aa9.08□□□□□ -0.96
CBX5-202ENST00000439541 SMN1Q16637 294 aaKnown RBP9.08□□□□□ -0.96
CBX5-202ENST00000439541 TIGD6Q17RP2 521 aa9.08□□□□□ -0.96
CBX5-202ENST00000439541 WBP2NLQ6ICG8 309 aa9.08□□□□□ -0.96
CBX5-202ENST00000439541 PGBD2Q6P3X8 592 aa9.08□□□□□ -0.96
CBX5-202ENST00000439541 TMEM81Q6P7N7 255 aa9.08□□□□□ -0.96
CBX5-202ENST00000439541 ZNF730Q6ZMV8 503 aa9.08□□□□□ -0.96
CBX5-202ENST00000439541 BTLAQ7Z6A9 289 aa9.08□□□□□ -0.96
CBX5-202ENST00000439541 CCDC71Q8IV32 467 aaPredicted RBP9.08□□□□□ -0.96
CBX5-202ENST00000439541 NRMQ8IXM6 262 aa9.08□□□□□ -0.96
CBX5-202ENST00000439541 OR4K17Q8NGC6 315 aa9.08□□□□□ -0.96
CBX5-202ENST00000439541 OR5M1Q8NGP8 315 aa9.08□□□□□ -0.96
CBX5-202ENST00000439541 APH1BQ8WW43 257 aa9.08□□□□□ -0.96
CBX5-202ENST00000439541 FAM46AQ96IP4 442 aaKnown RBP9.08□□□□□ -0.96
CBX5-202ENST00000439541 GNRHR2Q96P88 292 aa9.08□□□□□ -0.96
CBX5-202ENST00000439541 SECISBP2Q96T21 854 aaKnown RBP9.08□□□□□ -0.96
CBX5-202ENST00000439541 SACM1LQ9NTJ5 587 aa9.08□□□□□ -0.96
CBX5-202ENST00000439541 C20orf141Q9NUB4 165 aa9.08□□□□□ -0.96
CBX5-202ENST00000439541 MED17Q9NVC6 651 aa9.08□□□□□ -0.96
CBX5-202ENST00000439541 FKBP14Q9NWM8 211 aa9.08□□□□□ -0.96
CBX5-202ENST00000439541 TAS2R10Q9NYW0 307 aa9.08□□□□□ -0.96
CBX5-202ENST00000439541 CNIH4Q9P003 139 aa9.08□□□□□ -0.96
CBX5-202ENST00000439541 CCDC59Q9P031 241 aaKnown RBP9.08□□□□□ -0.96
CBX5-202ENST00000439541 RNF6Q9Y252 685 aa9.08□□□□□ -0.96
CBX5-202ENST00000439541 PMF1-BGLAPU3KQ54 211 aa9.08□□□□□ -0.96
CBX5-202ENST00000439541 MGAQ8IWI9 3026 aa9.07□□□□□ -0.96
CBX5-202ENST00000439541 IGKV1D-42A0A075B6H8 117 aa9.07□□□□□ -0.96
CBX5-202ENST00000439541 IGLV3-32A0A0A0MS00 114 aa9.07□□□□□ -0.96
CBX5-202ENST00000439541 PNMA8CA0A1B0GUJ8 204 aa9.07□□□□□ -0.96
CBX5-202ENST00000439541 OR5H15A6NDH6 313 aa9.07□□□□□ -0.96
CBX5-202ENST00000439541 UPK1BO75841 260 aa9.07□□□□□ -0.96
CBX5-202ENST00000439541 GASTP01350 101 aa9.07□□□□□ -0.96
CBX5-202ENST00000439541 PGCP20142 388 aa9.07□□□□□ -0.96
CBX5-202ENST00000439541 SMIM11AP58511 58 aa9.07□□□□□ -0.96
CBX5-202ENST00000439541 ARG2P78540 354 aa9.07□□□□□ -0.96
CBX5-202ENST00000439541 SNTA1Q13424 505 aa9.07□□□□□ -0.96
CBX5-202ENST00000439541 TIMM50Q3ZCQ8 353 aa9.07□□□□□ -0.96
CBX5-202ENST00000439541 TMEM236Q5W0B7 351 aa9.07□□□□□ -0.96
CBX5-202ENST00000439541 SLC30A6Q6NXT4 461 aa9.07□□□□□ -0.96
CBX5-202ENST00000439541 ULK3Q6PHR2 472 aa9.07□□□□□ -0.96
CBX5-202ENST00000439541 PRICKLE2Q7Z3G6 844 aa9.07□□□□□ -0.96
CBX5-202ENST00000439541 ZER1Q7Z7L7 766 aa9.07□□□□□ -0.96
CBX5-202ENST00000439541 ATG4DQ86TL0 474 aaPredicted RBP9.07□□□□□ -0.96
CBX5-202ENST00000439541 GPALPP1Q8IXQ4 340 aa9.07□□□□□ -0.96
CBX5-202ENST00000439541 FADS6Q8N9I5 356 aa9.07□□□□□ -0.96
CBX5-202ENST00000439541 MDS2Q8NDY4 140 aa9.07□□□□□ -0.96
CBX5-202ENST00000439541 TMEM239Q8WW34 195 aa9.07□□□□□ -0.96
CBX5-202ENST00000439541 ACOT11Q8WXI4 607 aaPredicted RBP9.07□□□□□ -0.96
CBX5-202ENST00000439541 NTNG2Q96CW9 530 aa9.07□□□□□ -0.96
CBX5-202ENST00000439541 FRMD6Q96NE9 622 aa9.07□□□□□ -0.96
CBX5-202ENST00000439541 POLR2J2Q9GZM3 115 aaKnown RBP9.07□□□□□ -0.96
CBX5-202ENST00000439541 POLR2J3Q9H1A7 115 aaKnown RBP9.07□□□□□ -0.96
CBX5-202ENST00000439541 EVA1AQ9H8M9 152 aa9.07□□□□□ -0.96
CBX5-202ENST00000439541 MEPEQ9NQ76 525 aaPredicted RBP9.07□□□□□ -0.96
CBX5-202ENST00000439541 SH3D21A4FU49 640 aa9.06□□□□□ -0.96
CBX5-202ENST00000439541 ARRDC5A6NEK1 342 aa9.06□□□□□ -0.96
CBX5-202ENST00000439541 METTL15A6NJ78 407 aa9.06□□□□□ -0.96
CBX5-202ENST00000439541 ELOA3DA6NLF2 546 aaPredicted RBP9.06□□□□□ -0.96
CBX5-202ENST00000439541 LRRN3E7EW58 273 aa9.06□□□□□ -0.96
CBX5-202ENST00000439541 RRP8O43159 456 aaKnown RBP9.06□□□□□ -0.96
CBX5-202ENST00000439541 TRIM3O75382 744 aaPredicted RBP9.06□□□□□ -0.96
CBX5-202ENST00000439541 SOX14O95416 240 aa9.06□□□□□ -0.96
CBX5-202ENST00000439541 LCKP06239 509 aa9.06□□□□□ -0.96
CBX5-202ENST00000439541 IGFBP1P08833 259 aaPredicted RBP9.06□□□□□ -0.96
CBX5-202ENST00000439541 PRKCAP17252 672 aa9.06□□□□□ -0.96
CBX5-202ENST00000439541 IL11P20809 199 aa9.06□□□□□ -0.96
CBX5-202ENST00000439541 ENDOUP21128 410 aaKnown RBP9.06□□□□□ -0.96
CBX5-202ENST00000439541 EPHA2P29317 976 aa9.06□□□□□ -0.96
CBX5-202ENST00000439541 IFNA8P32881 189 aa9.06□□□□□ -0.96
CBX5-202ENST00000439541 SLC1A3P43003 542 aa9.06□□□□□ -0.96
CBX5-202ENST00000439541 OMPP47874 163 aa9.06□□□□□ -0.96
CBX5-202ENST00000439541 GSSP48637 474 aa9.06□□□□□ -0.96
CBX5-202ENST00000439541 SUMO3P55854 103 aaPredicted RBP9.06□□□□□ -0.96
CBX5-202ENST00000439541 IFITM3Q01628 133 aa9.06□□□□□ -0.96
CBX5-202ENST00000439541 PRKCDQ05655 676 aa9.06□□□□□ -0.96
CBX5-202ENST00000439541 PLPPR5Q32ZL2 321 aa9.06□□□□□ -0.96
CBX5-202ENST00000439541 ELOA3BQ3SY89 546 aa9.06□□□□□ -0.96
CBX5-202ENST00000439541 Q6ZPB1 254 aaPredicted RBP9.06□□□□□ -0.96
CBX5-202ENST00000439541 MBOAT2Q6ZWT7 520 aa9.06□□□□□ -0.96
CBX5-202ENST00000439541 PLCZ1Q86YW0 608 aa9.06□□□□□ -0.96
CBX5-202ENST00000439541 STX19Q8N4C7 294 aa9.06□□□□□ -0.96
CBX5-202ENST00000439541 ELOA3Q8NG57 546 aa9.06□□□□□ -0.96
CBX5-202ENST00000439541 NR4A3Q92570 626 aa9.06□□□□□ -0.96
CBX5-202ENST00000439541 UBL7Q96S82 380 aaPredicted RBP9.06□□□□□ -0.96
CBX5-202ENST00000439541 ZNF426Q9BUY5 554 aa9.06□□□□□ -0.96
CBX5-202ENST00000439541 NXF2Q9GZY0 626 aaKnown RBP9.06□□□□□ -0.96
CBX5-202ENST00000439541 ANKRD19PQ9H560 264 aa9.06□□□□□ -0.96
CBX5-202ENST00000439541 SDHAF3Q9NRP4 125 aa9.06□□□□□ -0.96
CBX5-202ENST00000439541 IMPAD1Q9NX62 359 aa9.06□□□□□ -0.96
CBX5-202ENST00000439541 ZNF229Q9UJW7 825 aa9.06□□□□□ -0.96
CBX5-202ENST00000439541 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.06□□□□□ -0.96
CBX5-202ENST00000439541 RPH3AQ9Y2J0 694 aaPredicted RBP9.06□□□□□ -0.96
CBX5-202ENST00000439541 PEX16Q9Y5Y5 336 aa9.06□□□□□ -0.96
CBX5-202ENST00000439541 CHD8Q9HCK8 2581 aa9.06□□□□□ -0.96
CBX5-202ENST00000439541 ANKRD11Q6UB99 2663 aaPredicted RBP9.06□□□□□ -0.96
CBX5-202ENST00000439541 PCNX3Q9H6A9 2034 aa9.06□□□□□ -0.96
CBX5-202ENST00000439541 A0A087WUJ7 227 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms