RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 SPC24Q8NBT2 197 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 NCOA7Q8NI08 942 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 C8orf46Q8TAG6 207 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 MGARPQ8TDB4 240 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 PTP4A1Q93096 173 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 SLC35C1Q96A29 364 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 TMIGD2Q96BF3 282 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 CCDC114Q96M63 670 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 TSSK2Q96PF2 358 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 GSDMAQ96QA5 445 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 ATP6V0BQ99437 205 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 SLC6A7Q99884 636 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 OMDQ99983 421 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 API5Q9BZZ5 524 aaKnown RBP1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 RWDD1Q9H446 243 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 GRPEL1Q9HAV7 217 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 BEX1Q9HBH7 125 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 POPDC2Q9HBU9 364 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 KCNMB3Q9NPA1 279 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 LHX9Q9NQ69 397 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 PRSS16Q9NQE7 514 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 FBXO8Q9NRD0 319 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 ZNF446Q9NWS9 450 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 SENP1Q9P0U3 644 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 EXTL2Q9UBQ6 330 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 BLOC1S6Q9UL45 172 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 NAP1L2Q9ULW6 460 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 DDX19BQ9UMR2 479 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 RNF24Q9Y225 148 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 LIPT1Q9Y234 373 aa1.78□□□□□ -2.12
HMGB1P18-201ENST00000438801 SCN1AP35498 2009 aa1.78□□□□□ -2.13
HMGB1P18-201ENST00000438801 DSTQ03001 7570 aaKnown RBP1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 A0A0B4J203 849 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 C2orf92A0A1B0GVN3 265 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 ILVBLA1L0T0 632 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 PINLYPA6NC86 204 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 FRG2CA6NGY1 282 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 C5orf52A6NGY3 159 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 GOLGA6L10A6NI86 522 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 SDR42E2A6NKP2 422 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 USP27XA6NNY8 438 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 NPIPA5E9PKD4 350 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 KRTAP4-16G5E9R7 235 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 GOLGA6L19H0YKK7 550 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 LATO43561 262 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 ANGPTL7O43827 346 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 ZBTB14O43829 449 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 HCN1O60741 890 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 FMO6PO60774 539 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 B3GAT3O94766 335 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 ACTL6AO96019 429 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 RLN1P04808 185 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 ZFYP08048 801 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 HOXB7P09629 217 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 THRAP10827 490 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 NR2C1P13056 603 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 SLC25A16P16260 332 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 HLA-DPA1P20036 260 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 USF1P22415 310 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 CCND2P30279 289 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 TIA1P31483 386 aaKnown RBP eCLIP1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 GPC3P51654 580 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 MTTPP55157 894 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 ARG2P78540 354 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 AP1B1Q10567 949 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 LASP1Q14847 261 aaKnown RBP1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 CNPY1Q3B7I2 92 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 OR6B2Q6IFH4 312 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 KLHL10Q6JEL2 608 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 ALKBH5Q6P6C2 394 aaKnown RBP1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 FAM199XQ6PEV8 388 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 TRAT1Q6PIZ9 186 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 CLEC2AQ6UVW9 174 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 TMEM150AQ86TG1 271 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 NLRP14Q86W24 1093 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 PARGQ86W56 976 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 KLHL7Q8IXQ5 586 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 CCDC170Q8IYT3 715 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 BPIFB2Q8N4F0 458 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 RPRMLQ8N4K4 120 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 ZNF491Q8N8L2 437 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 Q8N9L7 120 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 CNNM3Q8NE01 707 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 SDR9C7Q8NEX9 313 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 OR13C5Q8NGS8 318 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 PSMA8Q8TAA3 256 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 HEXDCQ8WVB3 486 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 UBLCP1Q8WVY7 318 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 CKAP2Q8WWK9 683 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 TCP11Q8WWU5 503 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 ZNF606Q8WXB4 792 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 TAF4BQ92750 862 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 RNASE6Q93091 150 aaKnown RBP1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 SLCO4A1Q96BD0 722 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 BPIFA2Q96DR5 249 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 TRIM44Q96DX7 344 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 CCDC43Q96MW1 224 aaKnown RBP1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 ANP32EQ9BTT0 268 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 ANGPTL4Q9BY76 406 aa1.77□□□□□ -2.13
HMGB1P18-201ENST00000438801 GCOM2Q9BZD3 368 aaPredicted RBP1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms