RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 IMPA2O14732 288 aa23.4■■□□□ 1.34
CPNE1-216ENST00000437340 OCM2P0CE71 109 aa23.4■■□□□ 1.34
CPNE1-216ENST00000437340 OCMP0CE72 109 aaPredicted RBP23.4■■□□□ 1.34
CPNE1-216ENST00000437340 IFITM3Q01628 133 aa23.4■■□□□ 1.34
CPNE1-216ENST00000437340 IL10RAQ13651 578 aa23.4■■□□□ 1.34
CPNE1-216ENST00000437340 TBC1D25Q3MII6 688 aa23.4■■□□□ 1.34
CPNE1-216ENST00000437340 SPANXN2Q5MJ10 180 aa23.4■■□□□ 1.34
CPNE1-216ENST00000437340 C10orf53Q8N6V4 93 aa23.4■■□□□ 1.34
CPNE1-216ENST00000437340 LRRC75AQ8NAA5 344 aa23.4■■□□□ 1.34
CPNE1-216ENST00000437340 NPEPL1Q8NDH3 523 aa23.4■■□□□ 1.34
CPNE1-216ENST00000437340 SPSB2Q99619 263 aa23.4■■□□□ 1.34
CPNE1-216ENST00000437340 KCNS3Q9BQ31 491 aa23.4■■□□□ 1.34
CPNE1-216ENST00000437340 OCIAD1Q9NX40 245 aa23.4■■□□□ 1.34
CPNE1-216ENST00000437340 POLHQ9Y253 713 aa23.4■■□□□ 1.34
CPNE1-216ENST00000437340 PCDHGB6Q9Y5F9 930 aa23.4■■□□□ 1.34
CPNE1-216ENST00000437340 CD14P08571 375 aa23.39■■□□□ 1.33
CPNE1-216ENST00000437340 GP1BBP13224 206 aa23.39■■□□□ 1.33
CPNE1-216ENST00000437340 CXCR1P25024 350 aa23.39■■□□□ 1.33
CPNE1-216ENST00000437340 SLC26A5P58743 744 aa23.39■■□□□ 1.33
CPNE1-216ENST00000437340 TAS2R43P59537 309 aa23.39■■□□□ 1.33
CPNE1-216ENST00000437340 ATP1A4Q13733 1029 aa23.39■■□□□ 1.33
CPNE1-216ENST00000437340 OXA1LQ15070 435 aa23.39■■□□□ 1.33
CPNE1-216ENST00000437340 PAPD4Q6PIY7 484 aaKnown RBP23.39■■□□□ 1.33
CPNE1-216ENST00000437340 MOSPD2Q8NHP6 518 aa23.39■■□□□ 1.33
CPNE1-216ENST00000437340 MOGAT1Q96PD6 335 aa23.39■■□□□ 1.33
CPNE1-216ENST00000437340 DEPDC7Q96QD5 511 aa23.39■■□□□ 1.33
CPNE1-216ENST00000437340 TBX5Q99593 518 aa23.39■■□□□ 1.33
CPNE1-216ENST00000437340 LPAR4Q99677 370 aa23.39■■□□□ 1.33
CPNE1-216ENST00000437340 KLHDC3Q9BQ90 382 aa23.39■■□□□ 1.33
CPNE1-216ENST00000437340 KATNB1Q9BVA0 655 aa23.39■■□□□ 1.33
CPNE1-216ENST00000437340 NMNAT2Q9BZQ4 307 aa23.39■■□□□ 1.33
CPNE1-216ENST00000437340 FKRPQ9H9S5 495 aa23.39■■□□□ 1.33
CPNE1-216ENST00000437340 APMAPQ9HDC9 416 aa23.39■■□□□ 1.33
CPNE1-216ENST00000437340 QPCTLQ9NXS2 382 aa23.39■■□□□ 1.33
CPNE1-216ENST00000437340 GALNT8Q9NY28 637 aa23.39■■□□□ 1.33
CPNE1-216ENST00000437340 UGT2A1Q9Y4X1 527 aa23.39■■□□□ 1.33
CPNE1-216ENST00000437340 PCDHGB7Q9Y5F8 929 aa23.39■■□□□ 1.33
CPNE1-216ENST00000437340 ISPDA4D126 451 aa23.38■■□□□ 1.33
CPNE1-216ENST00000437340 BLOC1S5-TXNDC5H3BN57 136 aa23.38■■□□□ 1.33
CPNE1-216ENST00000437340 CPNE3O75131 537 aaKnown RBP23.38■■□□□ 1.33
CPNE1-216ENST00000437340 UPK1BO75841 260 aa23.38■■□□□ 1.33
CPNE1-216ENST00000437340 GYPBP06028 91 aa23.38■■□□□ 1.33
CPNE1-216ENST00000437340 MRPL3P09001 348 aaKnown RBP23.38■■□□□ 1.33
CPNE1-216ENST00000437340 UQCRC1P31930 480 aa23.38■■□□□ 1.33
CPNE1-216ENST00000437340 AQP2P41181 271 aa23.38■■□□□ 1.33
CPNE1-216ENST00000437340 ERVK-25P63136 954 aa23.38■■□□□ 1.33
CPNE1-216ENST00000437340 PON3Q15166 354 aa23.38■■□□□ 1.33
CPNE1-216ENST00000437340 ZNF181Q2M3W8 571 aa23.38■■□□□ 1.33
CPNE1-216ENST00000437340 ZNF800Q2TB10 664 aaPredicted RBP eCLIP23.38■■□□□ 1.33
CPNE1-216ENST00000437340 VASNQ6EMK4 673 aa23.38■■□□□ 1.33
CPNE1-216ENST00000437340 TMEM205Q6UW68 189 aa23.38■■□□□ 1.33
CPNE1-216ENST00000437340 PRR23CQ6ZRP0 262 aa23.38■■□□□ 1.33
CPNE1-216ENST00000437340 PARP16Q8N5Y8 322 aa23.38■■□□□ 1.33
CPNE1-216ENST00000437340 KTI12Q96EK9 354 aaPredicted RBP23.38■■□□□ 1.33
CPNE1-216ENST00000437340 WDR77Q9BQA1 342 aaPredicted RBP23.38■■□□□ 1.33
CPNE1-216ENST00000437340 C19orf25Q9UFG5 118 aaPredicted RBP23.38■■□□□ 1.33
CPNE1-216ENST00000437340 AGRPO00253 132 aa23.37■■□□□ 1.33
CPNE1-216ENST00000437340 MEN1O00255 615 aa23.37■■□□□ 1.33
CPNE1-216ENST00000437340 CTDSP2O14595 271 aa23.37■■□□□ 1.33
CPNE1-216ENST00000437340 TXNDC12O95881 172 aa23.37■■□□□ 1.33
CPNE1-216ENST00000437340 ZNF883P0CG24 379 aa23.37■■□□□ 1.33
CPNE1-216ENST00000437340 NAGAP17050 411 aa23.37■■□□□ 1.33
CPNE1-216ENST00000437340 DIO1P49895 249 aa23.37■■□□□ 1.33
CPNE1-216ENST00000437340 ZNF85Q03923 595 aa23.37■■□□□ 1.33
CPNE1-216ENST00000437340 LTBQ06643 244 aa23.37■■□□□ 1.33
CPNE1-216ENST00000437340 ALG10Q5BKT4 473 aa23.37■■□□□ 1.33
CPNE1-216ENST00000437340 CPEB2Q7Z5Q1 589 aaKnown RBP23.37■■□□□ 1.33
CPNE1-216ENST00000437340 GALNT6Q8NCL4 622 aa23.37■■□□□ 1.33
CPNE1-216ENST00000437340 OR5L2Q8NGL0 311 aa23.37■■□□□ 1.33
CPNE1-216ENST00000437340 CEP19Q96LK0 163 aa23.37■■□□□ 1.33
CPNE1-216ENST00000437340 CNN2Q99439 309 aaKnown RBP23.37■■□□□ 1.33
CPNE1-216ENST00000437340 TMED9Q9BVK6 235 aa23.37■■□□□ 1.33
CPNE1-216ENST00000437340 DAPK2Q9UIK4 370 aa23.37■■□□□ 1.33
CPNE1-216ENST00000437340 SPEGQ15772 3267 aa23.37■■□□□ 1.33
CPNE1-216ENST00000437340 LOC110117498-PIK3R3F6TDL0 507 aa23.37■■□□□ 1.33
CPNE1-216ENST00000437340 MAGEB3O15480 346 aa23.37■■□□□ 1.33
CPNE1-216ENST00000437340 RNF13O43567 381 aa23.37■■□□□ 1.33
CPNE1-216ENST00000437340 PFDN1O60925 122 aa23.37■■□□□ 1.33
CPNE1-216ENST00000437340 OR2T7P0C7T2 308 aa23.37■■□□□ 1.33
CPNE1-216ENST00000437340 SDC2P34741 201 aa23.37■■□□□ 1.33
CPNE1-216ENST00000437340 TOMM34Q15785 309 aaPredicted RBP23.37■■□□□ 1.33
CPNE1-216ENST00000437340 TRIM16LQ309B1 348 aa23.37■■□□□ 1.33
CPNE1-216ENST00000437340 GXYLT1Q4G148 440 aa23.37■■□□□ 1.33
CPNE1-216ENST00000437340 EMC4Q5J8M3 183 aa23.37■■□□□ 1.33
CPNE1-216ENST00000437340 MRPL14Q6P1L8 145 aaKnown RBP23.37■■□□□ 1.33
CPNE1-216ENST00000437340 FAM122BQ7Z309 247 aa23.37■■□□□ 1.33
CPNE1-216ENST00000437340 SUMF1Q8NBK3 374 aa23.37■■□□□ 1.33
CPNE1-216ENST00000437340 OR2T27Q8NH04 317 aa23.37■■□□□ 1.33
CPNE1-216ENST00000437340 B4GALNT2Q8NHY0 566 aa23.37■■□□□ 1.33
CPNE1-216ENST00000437340 WDFY2Q96P53 400 aa23.37■■□□□ 1.33
CPNE1-216ENST00000437340 NMNAT3Q96T66 252 aa23.37■■□□□ 1.33
CPNE1-216ENST00000437340 CRB3Q9BUF7 120 aa23.37■■□□□ 1.33
CPNE1-216ENST00000437340 RERGLQ9H628 205 aa23.37■■□□□ 1.33
CPNE1-216ENST00000437340 KLHL1Q9NR64 748 aa23.37■■□□□ 1.33
CPNE1-216ENST00000437340 TRAV36DV7A0A075B6V5 113 aa23.36■■□□□ 1.33
CPNE1-216ENST00000437340 GABRPO00591 440 aa23.36■■□□□ 1.33
CPNE1-216ENST00000437340 LRRTM2O43300 516 aa23.36■■□□□ 1.33
CPNE1-216ENST00000437340 SCO2O43819 266 aa23.36■■□□□ 1.33
CPNE1-216ENST00000437340 SNX4O95219 450 aa23.36■■□□□ 1.33
CPNE1-216ENST00000437340 NUDT14O95848 222 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms