RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 TMEM45BQ96B21 275 aa12.82□□□□□ -0.36
HDAC8-213ENST00000436675 PPP3R2Q96LZ3 170 aa12.82□□□□□ -0.36
HDAC8-213ENST00000436675 PRPF18Q99633 342 aaKnown RBP12.82□□□□□ -0.36
HDAC8-213ENST00000436675 OBP2BQ9NPH6 170 aa12.82□□□□□ -0.36
HDAC8-213ENST00000436675 EXD2Q9NVH0 621 aa12.82□□□□□ -0.36
HDAC8-213ENST00000436675 HIF1ANQ9NWT6 349 aa12.82□□□□□ -0.36
HDAC8-213ENST00000436675 PCDHGB4Q9UN71 923 aa12.82□□□□□ -0.36
HDAC8-213ENST00000436675 FAM157AC9JC47 383 aa12.81□□□□□ -0.36
HDAC8-213ENST00000436675 ZNF587BE7ETH6 402 aa12.81□□□□□ -0.36
HDAC8-213ENST00000436675 SCN2BO60939 215 aa12.81□□□□□ -0.36
HDAC8-213ENST00000436675 IGFBP1P08833 259 aaPredicted RBP12.81□□□□□ -0.36
HDAC8-213ENST00000436675 FKBP2P26885 142 aaKnown RBP12.81□□□□□ -0.36
HDAC8-213ENST00000436675 SELENOPP49908 381 aa12.81□□□□□ -0.36
HDAC8-213ENST00000436675 POLR2HP52434 150 aaKnown RBP12.81□□□□□ -0.36
HDAC8-213ENST00000436675 KCNJ10P78508 379 aa12.81□□□□□ -0.36
HDAC8-213ENST00000436675 UGT3A2Q3SY77 523 aa12.81□□□□□ -0.36
HDAC8-213ENST00000436675 ATAD3BQ5T9A4 648 aa12.81□□□□□ -0.36
HDAC8-213ENST00000436675 OR4F3Q6IEY1 312 aa12.81□□□□□ -0.36
HDAC8-213ENST00000436675 DEF8Q6ZN54 512 aa12.81□□□□□ -0.36
HDAC8-213ENST00000436675 RNF165Q6ZSG1 346 aa12.81□□□□□ -0.36
HDAC8-213ENST00000436675 ABHD12BQ7Z5M8 362 aaPredicted RBP12.81□□□□□ -0.36
HDAC8-213ENST00000436675 FNDC5Q8NAU1 212 aa12.81□□□□□ -0.36
HDAC8-213ENST00000436675 CKAP2Q8WWK9 683 aa12.81□□□□□ -0.36
HDAC8-213ENST00000436675 TMEM186Q96B77 213 aa12.81□□□□□ -0.36
HDAC8-213ENST00000436675 ROPN1LQ96C74 230 aa12.81□□□□□ -0.36
HDAC8-213ENST00000436675 C3orf30Q96M34 536 aa12.81□□□□□ -0.36
HDAC8-213ENST00000436675 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.81□□□□□ -0.36
HDAC8-213ENST00000436675 PCDHB10Q9UN67 800 aa12.81□□□□□ -0.36
HDAC8-213ENST00000436675 OR6C65A6NJZ3 312 aa12.8□□□□□ -0.36
HDAC8-213ENST00000436675 VSTM5A8MXK1 200 aa12.8□□□□□ -0.36
HDAC8-213ENST00000436675 WNT9BO14905 357 aa12.8□□□□□ -0.36
HDAC8-213ENST00000436675 LYPLA1O75608 230 aaPredicted RBP12.8□□□□□ -0.36
HDAC8-213ENST00000436675 UPK3AO75631 287 aa12.8□□□□□ -0.36
HDAC8-213ENST00000436675 TCN1P20061 433 aaPredicted RBP12.8□□□□□ -0.36
HDAC8-213ENST00000436675 CRHR1P34998 444 aa12.8□□□□□ -0.36
HDAC8-213ENST00000436675 HTR3AP46098 478 aa12.8□□□□□ -0.36
HDAC8-213ENST00000436675 CCT5P48643 541 aa12.8□□□□□ -0.36
HDAC8-213ENST00000436675 FUT5Q11128 374 aa12.8□□□□□ -0.36
HDAC8-213ENST00000436675 NPRL3Q12980 569 aa12.8□□□□□ -0.36
HDAC8-213ENST00000436675 PCLAFQ15004 111 aa12.8□□□□□ -0.36
HDAC8-213ENST00000436675 GPAT3Q53EU6 434 aa12.8□□□□□ -0.36
HDAC8-213ENST00000436675 C6orf136Q5SQH8 315 aa12.8□□□□□ -0.36
HDAC8-213ENST00000436675 C1QTNF12Q5T7M4 302 aa12.8□□□□□ -0.36
HDAC8-213ENST00000436675 UGT2A3Q6UWM9 527 aa12.8□□□□□ -0.36
HDAC8-213ENST00000436675 FRRS1Q6ZNA5 592 aa12.8□□□□□ -0.36
HDAC8-213ENST00000436675 TRMT10CQ7L0Y3 403 aaKnown RBP12.8□□□□□ -0.36
HDAC8-213ENST00000436675 NATD1Q8N6N6 113 aa12.8□□□□□ -0.36
HDAC8-213ENST00000436675 NUP37Q8NFH4 326 aa12.8□□□□□ -0.36
HDAC8-213ENST00000436675 OR4A15Q8NGL6 344 aa12.8□□□□□ -0.36
HDAC8-213ENST00000436675 CLDND2Q8NHS1 167 aa12.8□□□□□ -0.36
HDAC8-213ENST00000436675 FAM216AQ8WUB2 273 aa12.8□□□□□ -0.36
HDAC8-213ENST00000436675 PMM1Q92871 262 aa12.8□□□□□ -0.36
HDAC8-213ENST00000436675 LRRC37BQ96QE4 947 aa12.8□□□□□ -0.36
HDAC8-213ENST00000436675 SAP130Q9H0E3 1048 aa12.8□□□□□ -0.36
HDAC8-213ENST00000436675 ADPRHL2Q9NX46 363 aa12.8□□□□□ -0.36
HDAC8-213ENST00000436675 TREM2Q9NZC2 230 aa12.8□□□□□ -0.36
HDAC8-213ENST00000436675 CRNNQ9UBG3 495 aaPredicted RBP12.8□□□□□ -0.36
HDAC8-213ENST00000436675 TRRAPQ9Y4A5 3859 aa12.8□□□□□ -0.36
HDAC8-213ENST00000436675 LIPT2A6NK58 231 aa12.79□□□□□ -0.36
HDAC8-213ENST00000436675 SMIM23A6NLE4 172 aa12.79□□□□□ -0.36
HDAC8-213ENST00000436675 TRIM77I1YAP6 450 aa12.79□□□□□ -0.36
HDAC8-213ENST00000436675 COPEO14579 308 aa12.79□□□□□ -0.36
HDAC8-213ENST00000436675 ZNF208O43345 1280 aa12.79□□□□□ -0.36
HDAC8-213ENST00000436675 TRIM13O60858 407 aa12.79□□□□□ -0.36
HDAC8-213ENST00000436675 CPSF4O95639 269 aaKnown RBP12.79□□□□□ -0.36
HDAC8-213ENST00000436675 IGLV1-44P01699 117 aa12.79□□□□□ -0.36
HDAC8-213ENST00000436675 PRPS1L1P21108 318 aa12.79□□□□□ -0.36
HDAC8-213ENST00000436675 COL8A2P25067 703 aa12.79□□□□□ -0.36
HDAC8-213ENST00000436675 BNIP2Q12982 314 aa12.79□□□□□ -0.36
HDAC8-213ENST00000436675 TMEM225Q6GV28 225 aa12.79□□□□□ -0.36
HDAC8-213ENST00000436675 KRT80Q6KB66 452 aa12.79□□□□□ -0.36
HDAC8-213ENST00000436675 FAHD2BQ6P2I3 314 aaPredicted RBP12.79□□□□□ -0.36
HDAC8-213ENST00000436675 NIPAL3Q6P499 406 aa12.79□□□□□ -0.36
HDAC8-213ENST00000436675 ZCCHC23Q6ZST2 131 aa12.79□□□□□ -0.36
HDAC8-213ENST00000436675 ANKRD46Q86W74 232 aa12.79□□□□□ -0.36
HDAC8-213ENST00000436675 RIMKLAQ8IXN7 391 aa12.79□□□□□ -0.36
HDAC8-213ENST00000436675 C4orf33Q8N1A6 199 aa12.79□□□□□ -0.36
HDAC8-213ENST00000436675 FAHD2AQ96GK7 314 aa12.79□□□□□ -0.36
HDAC8-213ENST00000436675 NELFAQ9H3P2 528 aa12.79□□□□□ -0.36
HDAC8-213ENST00000436675 ZNF442Q9H7R0 627 aa12.79□□□□□ -0.36
HDAC8-213ENST00000436675 EXOSC3Q9NQT5 275 aaKnown RBP12.79□□□□□ -0.36
HDAC8-213ENST00000436675 GRIP1Q9Y3R0 1128 aa12.79□□□□□ -0.36
HDAC8-213ENST00000436675 SPEF1Q9Y4P9 236 aa12.79□□□□□ -0.36
HDAC8-213ENST00000436675 ARPC4-TTLL3A0A0A6YYG9 625 aa12.78□□□□□ -0.36
HDAC8-213ENST00000436675 IGHV2OR16-5A0A0B4J2B6 119 aa12.78□□□□□ -0.36
HDAC8-213ENST00000436675 AQP7P3A6NL99 342 aa12.78□□□□□ -0.36
HDAC8-213ENST00000436675 GPIP06744 558 aa12.78□□□□□ -0.36
HDAC8-213ENST00000436675 FAM153BP0C7A2 387 aa12.78□□□□□ -0.36
HDAC8-213ENST00000436675 G6PDP11413 515 aa12.78□□□□□ -0.36
HDAC8-213ENST00000436675 GPR6P46095 362 aaPredicted RBP12.78□□□□□ -0.36
HDAC8-213ENST00000436675 HILS1P60008 231 aa12.78□□□□□ -0.36
HDAC8-213ENST00000436675 ARF1P84077 181 aaKnown RBP12.78□□□□□ -0.36
HDAC8-213ENST00000436675 ROR2Q01974 943 aaKnown RBP12.78□□□□□ -0.36
HDAC8-213ENST00000436675 SNTB2Q13425 540 aaKnown RBP12.78□□□□□ -0.36
HDAC8-213ENST00000436675 DAG1Q14118 895 aa12.78□□□□□ -0.36
HDAC8-213ENST00000436675 XKR7Q5GH72 579 aa12.78□□□□□ -0.36
HDAC8-213ENST00000436675 BOD1Q96IK1 185 aa12.78□□□□□ -0.36
HDAC8-213ENST00000436675 ANKRD27Q96NW4 1050 aa12.78□□□□□ -0.36
HDAC8-213ENST00000436675 SF3B5Q9BWJ5 86 aaKnown RBP12.78□□□□□ -0.36
HDAC8-213ENST00000436675 FBXO9Q9UK97 447 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms