RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 CNTNAP3Q9BZ76 1288 aa10.44□□□□□ -0.74
SCN4A-201ENST00000435607 ACKR4Q9NPB9 350 aa10.44□□□□□ -0.74
SCN4A-201ENST00000435607 PROCRQ9UNN8 238 aa10.44□□□□□ -0.74
SCN4A-201ENST00000435607 KIDINS220Q9ULH0 1771 aa10.44□□□□□ -0.74
SCN4A-201ENST00000435607 GOSR1O95249 250 aa10.44□□□□□ -0.74
SCN4A-201ENST00000435607 CPMP14384 443 aa10.44□□□□□ -0.74
SCN4A-201ENST00000435607 OR1D4P47884 311 aa10.44□□□□□ -0.74
SCN4A-201ENST00000435607 RACK1P63244 317 aaKnown RBP10.44□□□□□ -0.74
SCN4A-201ENST00000435607 SQSTM1Q13501 440 aa10.44□□□□□ -0.74
SCN4A-201ENST00000435607 MOGSQ13724 837 aa10.44□□□□□ -0.74
SCN4A-201ENST00000435607 ZNF791Q3KP31 576 aaPredicted RBP10.44□□□□□ -0.74
SCN4A-201ENST00000435607 GDPGP1Q6ZNW5 385 aa10.44□□□□□ -0.74
SCN4A-201ENST00000435607 HTR3DQ70Z44 454 aa10.44□□□□□ -0.74
SCN4A-201ENST00000435607 SLC35F3Q8IY50 421 aa10.44□□□□□ -0.74
SCN4A-201ENST00000435607 TMEM185AQ8NFB2 350 aa10.44□□□□□ -0.74
SCN4A-201ENST00000435607 ZNRF4Q8WWF5 429 aa10.44□□□□□ -0.74
SCN4A-201ENST00000435607 S1PR3Q99500 378 aa10.44□□□□□ -0.74
SCN4A-201ENST00000435607 ZDHHC5Q9C0B5 715 aa10.44□□□□□ -0.74
SCN4A-201ENST00000435607 LINC00597Q9H2U6 94 aa10.44□□□□□ -0.74
SCN4A-201ENST00000435607 COL14A1Q05707 1796 aaKnown RBP10.44□□□□□ -0.74
SCN4A-201ENST00000435607 DEGS1O15121 323 aa10.44□□□□□ -0.74
SCN4A-201ENST00000435607 FZD7O75084 574 aa10.44□□□□□ -0.74
SCN4A-201ENST00000435607 FBXO45P0C2W1 286 aa10.44□□□□□ -0.74
SCN4A-201ENST00000435607 CNR2P34972 360 aa10.44□□□□□ -0.74
SCN4A-201ENST00000435607 UNC50Q53HI1 259 aa10.44□□□□□ -0.74
SCN4A-201ENST00000435607 METAP1DQ6UB28 335 aaPredicted RBP10.44□□□□□ -0.74
SCN4A-201ENST00000435607 USP51Q70EK9 711 aa10.44□□□□□ -0.74
SCN4A-201ENST00000435607 C12orf49Q9H741 205 aa10.44□□□□□ -0.74
SCN4A-201ENST00000435607 SLC22A11Q9NSA0 550 aa10.44□□□□□ -0.74
SCN4A-201ENST00000435607 FDXRP22570 491 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 AGFG1P52594 562 aaKnown RBP10.43□□□□□ -0.74
SCN4A-201ENST00000435607 MRPS34P82930 218 aaKnown RBP10.43□□□□□ -0.74
SCN4A-201ENST00000435607 CYB561A3Q8NBI2 242 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 EMG1Q92979 244 aaKnown RBP10.43□□□□□ -0.74
SCN4A-201ENST00000435607 NUDT22Q9BRQ3 303 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 RTL8AQ9BWD3 113 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 ARV1Q9H2C2 271 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 SLC5A10A0PJK1 596 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 SLC22A23A1A5C7 686 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 OR6C65A6NJZ3 312 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 GRPP07492 148 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 RAB40ALP0C0E4 278 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 SELENOWP63302 87 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 EDDM3AQ14507 147 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 SFT2D3Q587I9 215 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 UBE2NLQ5JXB2 153 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 BLOC1S3Q6QNY0 202 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 EXD3Q8N9H8 876 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 SECTM1Q8WVN6 248 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 RAB40AQ8WXH6 277 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 ABHD6Q9BV23 337 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 NMES1Q9C002 83 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 BARX1Q9HBU1 254 aaPredicted RBP10.43□□□□□ -0.74
SCN4A-201ENST00000435607 SMOXQ9NWM0 555 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 SAGE1Q9NXZ1 904 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 UBR1Q8IWV7 1749 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 AADACP22760 399 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 PPP1R3AQ16821 1122 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 GTF2H4Q92759 462 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 KIRREL1Q96J84 757 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 TLCD2A6NGC4 264 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 CRYABP02511 175 aaKnown RBP10.43□□□□□ -0.74
SCN4A-201ENST00000435607 MAKP20794 623 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 ZNF133P52736 654 aaPredicted RBP10.43□□□□□ -0.74
SCN4A-201ENST00000435607 TATDN3Q17R31 274 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 RPS26P11Q5JNZ5 115 aaPredicted RBP10.43□□□□□ -0.74
SCN4A-201ENST00000435607 TMEM139Q8IV31 216 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 ZNF582Q96NG8 517 aaPredicted RBP10.43□□□□□ -0.74
SCN4A-201ENST00000435607 SLC46A1Q96NT5 459 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 NSUN5Q96P11 429 aaKnown RBP10.43□□□□□ -0.74
SCN4A-201ENST00000435607 TMEM212A6NML5 194 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 HLA-HP01893 362 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 STT3AP46977 705 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 CTBSQ01459 385 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 RGNQ15493 299 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 KCNJ15Q99712 375 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 METTL15A6NJ78 407 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 A8MV72 311 aaPredicted RBP10.43□□□□□ -0.74
SCN4A-201ENST00000435607 CDK2AP1O14519 115 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 TMEM236Q5W0B7 351 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 OGFOD3Q6PK18 319 aa10.43□□□□□ -0.74
SCN4A-201ENST00000435607 NDRG4Q9ULP0 352 aaKnown RBP10.43□□□□□ -0.74
SCN4A-201ENST00000435607 PROZP22891 400 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 WNT7BP56706 349 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 CXCR4P61073 352 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 UBE2G1P62253 170 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.42□□□□□ -0.74
SCN4A-201ENST00000435607 ZNF626Q68DY1 528 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 ZNF813Q6ZN06 617 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 IDO2Q6ZQW0 420 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 PRSS48Q7RTY5 328 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 SERPINA12Q8IW75 414 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 SLC39A11Q8N1S5 342 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 DEFB123Q8N688 67 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 MCOLN1Q9GZU1 580 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 COPS3Q9UNS2 423 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 CORINQ9Y5Q5 1042 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 PUS1Q9Y606 427 aaKnown RBP eCLIP10.42□□□□□ -0.74
SCN4A-201ENST00000435607 ARPC5O15511 151 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 MRPS14O60783 128 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms