RNA–Protein interactions for RNA: ENST00000435497.1

LINC00028-201, long intergenic non-protein coding RNA 28, humanhuman

TSL 2 BASIC

Gene LINC00028, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00028-201ENST00000435497 HMGN4O00479 90 aa11.79□□□□□ -0.52
LINC00028-201ENST00000435497 PDE5AO76074 875 aa11.79□□□□□ -0.52
LINC00028-201ENST00000435497 IGLV1-44P01699 117 aa11.79□□□□□ -0.52
LINC00028-201ENST00000435497 CRYAAP02489 173 aa11.79□□□□□ -0.52
LINC00028-201ENST00000435497 CECR9P0C854 216 aa11.79□□□□□ -0.52
LINC00028-201ENST00000435497 SELENOPP49908 381 aa11.79□□□□□ -0.52
LINC00028-201ENST00000435497 PPOXP50336 477 aa11.79□□□□□ -0.52
LINC00028-201ENST00000435497 TUBA1BP68363 451 aa11.79□□□□□ -0.52
LINC00028-201ENST00000435497 TUBA4AP68366 448 aa11.79□□□□□ -0.52
LINC00028-201ENST00000435497 SYPL1Q16563 259 aa11.79□□□□□ -0.52
LINC00028-201ENST00000435497 GPAT3Q53EU6 434 aa11.79□□□□□ -0.52
LINC00028-201ENST00000435497 TUBA1AQ71U36 451 aa11.79□□□□□ -0.52
LINC00028-201ENST00000435497 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.79□□□□□ -0.52
LINC00028-201ENST00000435497 ANKFN1Q8N957 763 aa11.79□□□□□ -0.52
LINC00028-201ENST00000435497 NEURL3Q96EH8 262 aa11.79□□□□□ -0.52
LINC00028-201ENST00000435497 DOK1Q99704 481 aa11.79□□□□□ -0.52
LINC00028-201ENST00000435497 NELFAQ9H3P2 528 aa11.79□□□□□ -0.52
LINC00028-201ENST00000435497 PIF1Q9H611 641 aa11.79□□□□□ -0.52
LINC00028-201ENST00000435497 NOP53Q9NZM5 478 aaKnown RBP11.79□□□□□ -0.52
LINC00028-201ENST00000435497 ARPC4-TTLL3A0A0A6YYG9 625 aa11.78□□□□□ -0.52
LINC00028-201ENST00000435497 AGAP5A6NIR3 686 aa11.78□□□□□ -0.52
LINC00028-201ENST00000435497 AQP7P3A6NL99 342 aa11.78□□□□□ -0.52
LINC00028-201ENST00000435497 FAAHO00519 579 aa11.78□□□□□ -0.52
LINC00028-201ENST00000435497 SPAG7O75391 227 aa11.78□□□□□ -0.52
LINC00028-201ENST00000435497 UPK3AO75631 287 aa11.78□□□□□ -0.52
LINC00028-201ENST00000435497 CHRM4P08173 479 aa11.78□□□□□ -0.52
LINC00028-201ENST00000435497 DAOP14920 347 aa11.78□□□□□ -0.52
LINC00028-201ENST00000435497 CFPP27918 469 aa11.78□□□□□ -0.52
LINC00028-201ENST00000435497 THBS4P35443 961 aa11.78□□□□□ -0.52
LINC00028-201ENST00000435497 SERPINB5P36952 375 aa11.78□□□□□ -0.52
LINC00028-201ENST00000435497 MAP2K6P52564 334 aa11.78□□□□□ -0.52
LINC00028-201ENST00000435497 EPS8Q12929 822 aa11.78□□□□□ -0.52
LINC00028-201ENST00000435497 MAD2L1Q13257 205 aaPredicted RBP11.78□□□□□ -0.52
LINC00028-201ENST00000435497 CASP8Q14790 479 aa11.78□□□□□ -0.52
LINC00028-201ENST00000435497 OR7A5Q15622 319 aa11.78□□□□□ -0.52
LINC00028-201ENST00000435497 SMU1Q2TAY7 513 aa11.78□□□□□ -0.52
LINC00028-201ENST00000435497 C3orf36Q3SXR2 165 aa11.78□□□□□ -0.52
LINC00028-201ENST00000435497 CREB3L2Q70SY1 520 aa11.78□□□□□ -0.52
LINC00028-201ENST00000435497 MYPOPQ86VE0 399 aaPredicted RBP11.78□□□□□ -0.52
LINC00028-201ENST00000435497 CMIPQ8IY22 773 aa11.78□□□□□ -0.52
LINC00028-201ENST00000435497 LINC01356Q8N9X3 169 aa11.78□□□□□ -0.52
LINC00028-201ENST00000435497 TCP10LQ8TDR4 215 aa11.78□□□□□ -0.52
LINC00028-201ENST00000435497 HPS1Q92902 700 aa11.78□□□□□ -0.52
LINC00028-201ENST00000435497 KCNS3Q9BQ31 491 aa11.78□□□□□ -0.52
LINC00028-201ENST00000435497 RAB1BQ9H0U4 201 aa11.78□□□□□ -0.52
LINC00028-201ENST00000435497 AKTIPQ9H8T0 292 aa11.78□□□□□ -0.52
LINC00028-201ENST00000435497 MGAM2Q2M2H8 2515 aa11.77□□□□□ -0.53
LINC00028-201ENST00000435497 A0A096LPE4 126 aa11.77□□□□□ -0.53
LINC00028-201ENST00000435497 A0A1W2PPZ6 126 aa11.77□□□□□ -0.53
LINC00028-201ENST00000435497 TLDC2A0PJX2 215 aa11.77□□□□□ -0.53
LINC00028-201ENST00000435497 TMEM229AB2RXF0 380 aa11.77□□□□□ -0.53
LINC00028-201ENST00000435497 LYNX1G3V0Z9 82 aa11.77□□□□□ -0.53
LINC00028-201ENST00000435497 hCG_2039718K7EN88 272 aa11.77□□□□□ -0.53
LINC00028-201ENST00000435497 VENTXO95231 258 aa11.77□□□□□ -0.53
LINC00028-201ENST00000435497 GPIP06744 558 aa11.77□□□□□ -0.53
LINC00028-201ENST00000435497 CELA3BP08861 270 aa11.77□□□□□ -0.53
LINC00028-201ENST00000435497 LYNX1P0DP58 116 aa11.77□□□□□ -0.53
LINC00028-201ENST00000435497 RPS4Y1P22090 263 aaKnown RBP11.77□□□□□ -0.53
LINC00028-201ENST00000435497 APEX1P27695 318 aaKnown RBP11.77□□□□□ -0.53
LINC00028-201ENST00000435497 SRP14P37108 136 aaKnown RBP11.77□□□□□ -0.53
LINC00028-201ENST00000435497 KHKP50053 298 aa11.77□□□□□ -0.53
LINC00028-201ENST00000435497 CHN2P52757 468 aa11.77□□□□□ -0.53
LINC00028-201ENST00000435497 CDH15P55291 814 aa11.77□□□□□ -0.53
LINC00028-201ENST00000435497 BNIP2Q12982 314 aa11.77□□□□□ -0.53
LINC00028-201ENST00000435497 RIN1Q13671 783 aa11.77□□□□□ -0.53
LINC00028-201ENST00000435497 TRIP10Q15642 601 aa11.77□□□□□ -0.53
LINC00028-201ENST00000435497 MRPL2Q5T653 305 aaKnown RBP11.77□□□□□ -0.53
LINC00028-201ENST00000435497 LRRC74BQ6ZQY2 392 aa11.77□□□□□ -0.53
LINC00028-201ENST00000435497 ABHD12BQ7Z5M8 362 aaPredicted RBP11.77□□□□□ -0.53
LINC00028-201ENST00000435497 GPAT4Q86UL3 456 aa11.77□□□□□ -0.53
LINC00028-201ENST00000435497 EPHX4Q8IUS5 362 aa11.77□□□□□ -0.53
LINC00028-201ENST00000435497 ZNF786Q8N393 782 aa11.77□□□□□ -0.53
LINC00028-201ENST00000435497 FAM169BQ8N8A8 192 aa11.77□□□□□ -0.53
LINC00028-201ENST00000435497 NUP37Q8NFH4 326 aa11.77□□□□□ -0.53
LINC00028-201ENST00000435497 OR4F15Q8NGB8 312 aa11.77□□□□□ -0.53
LINC00028-201ENST00000435497 KIF18AQ8NI77 898 aa11.77□□□□□ -0.53
LINC00028-201ENST00000435497 MAGEE2Q8TD90 523 aaPredicted RBP11.77□□□□□ -0.53
LINC00028-201ENST00000435497 NEU4Q8WWR8 484 aaPredicted RBP11.77□□□□□ -0.53
LINC00028-201ENST00000435497 PPP1R36Q96LQ0 422 aa11.77□□□□□ -0.53
LINC00028-201ENST00000435497 TRNT1Q96Q11 434 aaKnown RBP11.77□□□□□ -0.53
LINC00028-201ENST00000435497 DPY30Q9C005 99 aa11.77□□□□□ -0.53
LINC00028-201ENST00000435497 MTHFD2LQ9H903 347 aaPredicted RBP11.77□□□□□ -0.53
LINC00028-201ENST00000435497 MARCOQ9UEW3 520 aaPredicted RBP11.77□□□□□ -0.53
LINC00028-201ENST00000435497 CFAP73A6NFT4 308 aa11.76□□□□□ -0.53
LINC00028-201ENST00000435497 ZNF587BE7ETH6 402 aa11.76□□□□□ -0.53
LINC00028-201ENST00000435497 ITM2AO43736 263 aa11.76□□□□□ -0.53
LINC00028-201ENST00000435497 KRT33AO76009 404 aa11.76□□□□□ -0.53
LINC00028-201ENST00000435497 IGKV3-15P01624 115 aa11.76□□□□□ -0.53
LINC00028-201ENST00000435497 BPGMP07738 259 aa11.76□□□□□ -0.53
LINC00028-201ENST00000435497 GKN3PP0CG01 181 aa11.76□□□□□ -0.53
LINC00028-201ENST00000435497 CREB1P16220 341 aa11.76□□□□□ -0.53
LINC00028-201ENST00000435497 PAX7P23759 505 aa11.76□□□□□ -0.53
LINC00028-201ENST00000435497 ACAA2P42765 397 aaKnown RBP11.76□□□□□ -0.53
LINC00028-201ENST00000435497 UBE2NP61088 152 aaKnown RBP11.76□□□□□ -0.53
LINC00028-201ENST00000435497 MAPK11Q15759 364 aa11.76□□□□□ -0.53
LINC00028-201ENST00000435497 GSTA3Q16772 222 aa11.76□□□□□ -0.53
LINC00028-201ENST00000435497 SPANXN4Q5MJ08 99 aa11.76□□□□□ -0.53
LINC00028-201ENST00000435497 ANXA8L1Q5VT79 327 aa11.76□□□□□ -0.53
LINC00028-201ENST00000435497 TMEM225Q6GV28 225 aa11.76□□□□□ -0.53
LINC00028-201ENST00000435497 C12orf54Q6X4T0 127 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms