RNA–Protein interactions for RNA: ENST00000434411.5

SNHG20-202, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best) BASIC

Gene SNHG20, Length 2,143 nt, Biotype sense overlapping, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-202ENST00000434411 TMEM238C9JI98 176 aa11.19□□□□□ -0.62
SNHG20-202ENST00000434411 M0R129 80 aa11.19□□□□□ -0.62
SNHG20-202ENST00000434411 PRICKLE3O43900 615 aaPredicted RBP11.19□□□□□ -0.62
SNHG20-202ENST00000434411 ACSM4P0C7M7 580 aa11.19□□□□□ -0.62
SNHG20-202ENST00000434411 SLC35G6P0C7Q6 338 aa11.19□□□□□ -0.62
SNHG20-202ENST00000434411 RRASP10301 218 aa11.19□□□□□ -0.62
SNHG20-202ENST00000434411 ZNF10P21506 573 aaPredicted RBP11.19□□□□□ -0.62
SNHG20-202ENST00000434411 KHKP50053 298 aa11.19□□□□□ -0.62
SNHG20-202ENST00000434411 ACTBP60709 375 aa11.19□□□□□ -0.62
SNHG20-202ENST00000434411 ACTA2P62736 377 aa11.19□□□□□ -0.62
SNHG20-202ENST00000434411 ACTG1P63261 375 aa11.19□□□□□ -0.62
SNHG20-202ENST00000434411 ACTG2P63267 376 aa11.19□□□□□ -0.62
SNHG20-202ENST00000434411 ACTC1P68032 377 aa11.19□□□□□ -0.62
SNHG20-202ENST00000434411 ACTA1P68133 377 aa11.19□□□□□ -0.62
SNHG20-202ENST00000434411 E2F1Q01094 437 aa11.19□□□□□ -0.62
SNHG20-202ENST00000434411 KIR2DS3Q14952 304 aa11.19□□□□□ -0.62
SNHG20-202ENST00000434411 ZIC1Q15915 447 aa11.19□□□□□ -0.62
SNHG20-202ENST00000434411 COLEC12Q5KU26 742 aa11.19□□□□□ -0.62
SNHG20-202ENST00000434411 C1orf94Q6P1W5 598 aa11.19□□□□□ -0.62
SNHG20-202ENST00000434411 TMEM64Q6YI46 380 aa11.19□□□□□ -0.62
SNHG20-202ENST00000434411 SLC46A3Q7Z3Q1 461 aa11.19□□□□□ -0.62
SNHG20-202ENST00000434411 TRIM48Q8IWZ4 208 aa11.19□□□□□ -0.62
SNHG20-202ENST00000434411 MMP21Q8N119 569 aa11.19□□□□□ -0.62
SNHG20-202ENST00000434411 CELF2-AS1Q8N7Q2 184 aa11.19□□□□□ -0.62
SNHG20-202ENST00000434411 SFXN5Q8TD22 340 aa11.19□□□□□ -0.62
SNHG20-202ENST00000434411 MAFIPQ8WZ33 124 aa11.19□□□□□ -0.62
SNHG20-202ENST00000434411 THRSPQ92748 146 aa11.19□□□□□ -0.62
SNHG20-202ENST00000434411 GTPBP3Q969Y2 492 aaKnown RBP11.19□□□□□ -0.62
SNHG20-202ENST00000434411 MS4A6EQ96DS6 147 aa11.19□□□□□ -0.62
SNHG20-202ENST00000434411 LINC00052Q96N35 136 aa11.19□□□□□ -0.62
SNHG20-202ENST00000434411 HDHD5Q9BXW7 423 aa11.19□□□□□ -0.62
SNHG20-202ENST00000434411 ZNF768Q9H5H4 540 aaKnown RBP11.19□□□□□ -0.62
SNHG20-202ENST00000434411 ABCB10Q9NRK6 738 aa11.19□□□□□ -0.62
SNHG20-202ENST00000434411 PLEKHM1Q9Y4G2 1056 aa11.19□□□□□ -0.62
SNHG20-202ENST00000434411 CCDC88CQ9P219 2028 aa11.19□□□□□ -0.62
SNHG20-202ENST00000434411 MDC1Q14676 2089 aaKnown RBP11.19□□□□□ -0.62
SNHG20-202ENST00000434411 PRAMEF33A0A0G2JMD5 474 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 ARRDC5A6NEK1 342 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 GPRIN2O60269 458 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 PRAMEF10O60809 474 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 GADD45GO95257 159 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 IFNGP01579 166 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 RPLP0P05388 317 aaKnown RBP11.18□□□□□ -0.62
SNHG20-202ENST00000434411 ADORA3P0DMS8 318 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 GABRB1P18505 474 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 TLX1P31314 330 aaPredicted RBP11.18□□□□□ -0.62
SNHG20-202ENST00000434411 ST3GAL4Q11206 333 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 STX4Q12846 297 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 SLAMF1Q13291 335 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 TNFAIP8L2Q6P589 184 aaPredicted RBP11.18□□□□□ -0.62
SNHG20-202ENST00000434411 RBMS3Q6XE24 437 aaKnown RBP11.18□□□□□ -0.62
SNHG20-202ENST00000434411 RD3Q7Z3Z2 195 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 UBE3DQ7Z6J8 389 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 POGLUT1Q8NBL1 392 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 LMX1AQ8TE12 382 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 OR1E3Q8WZA6 343 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 GAL3ST3Q96A11 431 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 MARS2Q96GW9 593 aaKnown RBP11.18□□□□□ -0.62
SNHG20-202ENST00000434411 COL21A1Q96P44 957 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 GSX1Q9H4S2 264 aaPredicted RBP11.18□□□□□ -0.62
SNHG20-202ENST00000434411 KLHL20Q9Y2M5 609 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 ENPP4Q9Y6X5 453 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 OR2AT4A6NND4 320 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 WWP2O00308 870 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 UPK1BO75841 260 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 SPDEFO95238 335 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 PTHP01270 115 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 GUSBP08236 651 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 LINC00614P0C842 121 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 F3P13726 295 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 CTSEP14091 401 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 LCN1P31025 176 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 GRK5P34947 590 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 XCR1P46094 333 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 NCBP2P52298 156 aaKnown RBP eCLIP11.18□□□□□ -0.624e-8■■■■□ 23.9
SNHG20-202ENST00000434411 SMIM11AP58511 58 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 PRR5P85299 388 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 PCGF3Q3KNV8 242 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 PRRT3Q5FWE3 981 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 Q5PR19 223 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 TPRG1LQ5T0D9 272 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 ARHGAP40Q5TG30 622 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 RPL13AP3Q6NVV1 102 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 ABHD17CQ6PCB6 329 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 VHLLQ6RSH7 139 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 THNSL2Q86YJ6 484 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 GID4Q8IVV7 300 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 RNF113BQ8IZP6 322 aaKnown RBP11.18□□□□□ -0.62
SNHG20-202ENST00000434411 ZNF561Q8N587 486 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 HORMAD2Q8N7B1 307 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 AMER2Q8N7J2 671 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 ACOT4Q8N9L9 421 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 FAM181AQ8N9Y4 354 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 KBTBD8Q8NFY9 601 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 OR56A1Q8NGH5 318 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 DNAJA4Q8WW22 397 aaPredicted RBP11.18□□□□□ -0.62
SNHG20-202ENST00000434411 C22orf15Q8WYQ4 148 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 ABHD17AQ96GS6 310 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 TMEM19Q96HH6 336 aa11.18□□□□□ -0.62
SNHG20-202ENST00000434411 BOD1Q96IK1 185 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms