RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 TACR1P25103 407 aa10.5□□□□□ -0.73
CECR3-201ENST00000428828 ATP5A1P25705 553 aaKnown RBP10.5□□□□□ -0.73
CECR3-201ENST00000428828 OR1D4P47884 311 aa10.5□□□□□ -0.73
CECR3-201ENST00000428828 RFX3P48380 749 aa10.5□□□□□ -0.73
CECR3-201ENST00000428828 MAT1AQ00266 395 aaKnown RBP10.5□□□□□ -0.73
CECR3-201ENST00000428828 STX4Q12846 297 aa10.5□□□□□ -0.73
CECR3-201ENST00000428828 IL11RAQ14626 422 aa10.5□□□□□ -0.73
CECR3-201ENST00000428828 PTGES3Q15185 160 aaKnown RBP10.5□□□□□ -0.73
CECR3-201ENST00000428828 ZNF124Q15973 351 aa10.5□□□□□ -0.73
CECR3-201ENST00000428828 NTRK2Q16620 822 aa10.5□□□□□ -0.73
CECR3-201ENST00000428828 OCLNQ16625 522 aa10.5□□□□□ -0.73
CECR3-201ENST00000428828 GSG1Q2KHT4 349 aa10.5□□□□□ -0.73
CECR3-201ENST00000428828 SLC25A30Q5SVS4 291 aa10.5□□□□□ -0.73
CECR3-201ENST00000428828 C22orf42Q6IC83 251 aa10.5□□□□□ -0.73
CECR3-201ENST00000428828 LAPTM4BQ86VI4 370 aa10.5□□□□□ -0.73
CECR3-201ENST00000428828 ACOT4Q8N9L9 421 aa10.5□□□□□ -0.73
CECR3-201ENST00000428828 OR10Q1Q8NGQ4 319 aa10.5□□□□□ -0.73
CECR3-201ENST00000428828 OR2T35Q8NGX2 323 aa10.5□□□□□ -0.73
CECR3-201ENST00000428828 MOSPD2Q8NHP6 518 aa10.5□□□□□ -0.73
CECR3-201ENST00000428828 TM9SF4Q92544 642 aa10.5□□□□□ -0.73
CECR3-201ENST00000428828 LRRC46Q96FV0 321 aa10.5□□□□□ -0.73
CECR3-201ENST00000428828 PIP5K1AQ99755 562 aa10.5□□□□□ -0.73
CECR3-201ENST00000428828 TREX2Q9BQ50 279 aaPredicted RBP10.5□□□□□ -0.73
CECR3-201ENST00000428828 TCEAL7Q9BRU2 100 aa10.5□□□□□ -0.73
CECR3-201ENST00000428828 DOHHQ9BU89 302 aa10.5□□□□□ -0.73
CECR3-201ENST00000428828 PTDSS2Q9BVG9 487 aa10.5□□□□□ -0.73
CECR3-201ENST00000428828 C1QTNF6Q9BXI9 259 aa10.5□□□□□ -0.73
CECR3-201ENST00000428828 ULBP3Q9BZM4 244 aa10.5□□□□□ -0.73
CECR3-201ENST00000428828 PRDM9Q9NQV7 894 aa10.5□□□□□ -0.73
CECR3-201ENST00000428828 THSD1Q9NS62 852 aa10.5□□□□□ -0.73
CECR3-201ENST00000428828 CYSLTR2Q9NS75 346 aa10.5□□□□□ -0.73
CECR3-201ENST00000428828 COMMD3Q9UBI1 195 aa10.5□□□□□ -0.73
CECR3-201ENST00000428828 EDARQ9UNE0 448 aa10.5□□□□□ -0.73
CECR3-201ENST00000428828 SLC22A7Q9Y694 548 aa10.5□□□□□ -0.73
CECR3-201ENST00000428828 SPTBN2O15020 2390 aa10.5□□□□□ -0.73
CECR3-201ENST00000428828 PIEZO1Q92508 2521 aa10.49□□□□□ -0.73
CECR3-201ENST00000428828 IRGMA1A4Y4 181 aa10.49□□□□□ -0.73
CECR3-201ENST00000428828 FAM74A7A6NL05 159 aa10.49□□□□□ -0.73
CECR3-201ENST00000428828 B4E171 279 aa10.49□□□□□ -0.73
CECR3-201ENST00000428828 SUV39H1O43463 412 aa10.49□□□□□ -0.73
CECR3-201ENST00000428828 FOXS1O43638 330 aa10.49□□□□□ -0.73
CECR3-201ENST00000428828 GALR3O60755 368 aaPredicted RBP10.49□□□□□ -0.73
CECR3-201ENST00000428828 SC5DO75845 299 aa10.49□□□□□ -0.73
CECR3-201ENST00000428828 HTR3BO95264 441 aa10.49□□□□□ -0.73
CECR3-201ENST00000428828 S100A9P06702 114 aaKnown RBP10.49□□□□□ -0.73
CECR3-201ENST00000428828 SMIM10L1P0DMW3 83 aa10.49□□□□□ -0.73
CECR3-201ENST00000428828 BCKDHAP12694 445 aa10.49□□□□□ -0.73
CECR3-201ENST00000428828 TSPAN7P41732 249 aa10.49□□□□□ -0.73
CECR3-201ENST00000428828 AVPR1BP47901 424 aa10.49□□□□□ -0.73
CECR3-201ENST00000428828 LIMS1P48059 325 aa10.49□□□□□ -0.73
CECR3-201ENST00000428828 VEGFCP49767 419 aa10.49□□□□□ -0.73
CECR3-201ENST00000428828 GABREP78334 506 aa10.49□□□□□ -0.73
CECR3-201ENST00000428828 RELQ04864 619 aaPredicted RBP10.49□□□□□ -0.73
CECR3-201ENST00000428828 FOXC1Q12948 553 aa10.49□□□□□ -0.73
CECR3-201ENST00000428828 FAM74A3Q4VXF1 159 aa10.49□□□□□ -0.73
CECR3-201ENST00000428828 DCAF12Q5T6F0 453 aa10.49□□□□□ -0.73
CECR3-201ENST00000428828 LIPKQ5VXJ0 399 aa10.49□□□□□ -0.73
CECR3-201ENST00000428828 CEACAM20Q6UY09 585 aa10.49□□□□□ -0.73
CECR3-201ENST00000428828 BTN2A1Q7KYR7 527 aa10.49□□□□□ -0.73
CECR3-201ENST00000428828 PTOV1Q86YD1 416 aa10.49□□□□□ -0.73
CECR3-201ENST00000428828 LGI4Q8N135 537 aa10.49□□□□□ -0.73
CECR3-201ENST00000428828 SLC38A9Q8NBW4 561 aa10.49□□□□□ -0.73
CECR3-201ENST00000428828 KCTD12Q96CX2 325 aaKnown RBP10.49□□□□□ -0.73
CECR3-201ENST00000428828 ORAI1Q96D31 301 aa10.49□□□□□ -0.73
CECR3-201ENST00000428828 SMIM10Q96HG1 83 aa10.49□□□□□ -0.73
CECR3-201ENST00000428828 RBM14Q96PK6 669 aaKnown RBP10.49□□□□□ -0.73
CECR3-201ENST00000428828 GAL3ST1Q99999 423 aa10.49□□□□□ -0.73
CECR3-201ENST00000428828 SEMA4CQ9C0C4 833 aa10.49□□□□□ -0.73
CECR3-201ENST00000428828 DDX31Q9H8H2 851 aaKnown RBP10.49□□□□□ -0.73
CECR3-201ENST00000428828 EVA1AQ9H8M9 152 aa10.49□□□□□ -0.73
CECR3-201ENST00000428828 NUDT15Q9NV35 164 aa10.49□□□□□ -0.73
CECR3-201ENST00000428828 NDUFAF4Q9P032 175 aa10.49□□□□□ -0.73
CECR3-201ENST00000428828 CBLCQ9ULV8 474 aa10.49□□□□□ -0.73
CECR3-201ENST00000428828 SRPK3Q9UPE1 567 aa10.49□□□□□ -0.73
CECR3-201ENST00000428828 DSPPQ9NZW4 1301 aa10.49□□□□□ -0.73
CECR3-201ENST00000428828 A0A0A6YYD5 115 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 A0A1B0GX78 115 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 TMEM129A0AVI4 362 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 NPIPB8E9PQR5 432 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 SGCEO43556 437 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 PRKRAO75569 313 aaKnown RBP10.48□□□□□ -0.73
CECR3-201ENST00000428828 AQP8O94778 261 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 TNFSF15O95150 251 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 APOC3P02656 99 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 MAPK3P27361 379 aaPredicted RBP10.48□□□□□ -0.73
CECR3-201ENST00000428828 RBMS1P29558 406 aaKnown RBP10.48□□□□□ -0.73
CECR3-201ENST00000428828 CAPZA2P47755 286 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 GDI2P50395 445 aaKnown RBP10.48□□□□□ -0.73
CECR3-201ENST00000428828 NR0B1P51843 470 aaKnown RBP10.48□□□□□ -0.73
CECR3-201ENST00000428828 CRISP1P54107 249 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 TAS2R50P59544 299 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 ZNF763Q0D2J5 394 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 EIF3IQ13347 325 aaKnown RBP10.48□□□□□ -0.73
CECR3-201ENST00000428828 PUM1Q14671 1186 aaKnown RBP eCLIP10.48□□□□□ -0.73
CECR3-201ENST00000428828 SLC25A25Q6KCM7 469 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 TMEM17Q86X19 198 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 LRRC28Q86X40 367 aaPredicted RBP10.48□□□□□ -0.73
CECR3-201ENST00000428828 STX12Q86Y82 276 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 MMP21Q8N119 569 aa10.48□□□□□ -0.73
CECR3-201ENST00000428828 C12orf45Q8N5I9 185 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms