RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 UQCRC1P31930 480 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 RPS5P46782 204 aaKnown RBP5.4□□□□□ -1.54
HMGB3-202ENST00000419110 NUDT6P53370 316 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 CDH11P55287 796 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 DSCR4P56555 118 aaPredicted RBP5.4□□□□□ -1.54
HMGB3-202ENST00000419110 ARG2P78540 354 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 CDK5Q00535 292 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 ZNF91Q05481 1191 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 CDK5R2Q13319 367 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 MFAP5Q13361 173 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 KRR1Q13601 381 aaKnown RBP5.4□□□□□ -1.54
HMGB3-202ENST00000419110 TOMM20Q15388 145 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 TGIF1Q15583 401 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 OR1C1Q15619 314 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 TOMM34Q15785 309 aaPredicted RBP5.4□□□□□ -1.54
HMGB3-202ENST00000419110 SGCBQ16585 318 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 SYT14P1Q58G82 188 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 ALG10Q5BKT4 473 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 SLC25A53Q5H9E4 307 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 ARMC4Q5T2S8 1044 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 AGAP7PQ5VUJ5 663 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 TMEM236Q5W0B7 351 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 OR5M10Q6IEU7 315 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 LINC00114Q6XXX2 140 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 CXXC5Q7LFL8 322 aaKnown RBP5.4□□□□□ -1.54
HMGB3-202ENST00000419110 HDDC2Q7Z4H3 204 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 JAZF1Q86VZ6 243 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 CCDC103Q8IW40 242 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 LNX2Q8N448 690 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 STX19Q8N4C7 294 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 TCEANCQ8N8B7 351 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 SCAIQ8N9R8 606 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 LSM14AQ8ND56 463 aaKnown RBP5.4□□□□□ -1.54
HMGB3-202ENST00000419110 ZNF540Q8NDQ6 660 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 ZNF248Q8NDW4 579 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 OR4Q3Q8NH05 313 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 OR6S1Q8NH40 331 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 OR51A7Q8NH64 312 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 C9orf43Q8TAL5 461 aaPredicted RBP5.4□□□□□ -1.54
HMGB3-202ENST00000419110 APH1BQ8WW43 257 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 FCGR1BQ92637 280 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 MYDGFQ969H8 173 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 ZHX1-C8orf76Q96EF9 292 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 FRMD6Q96NE9 622 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 AGAP4Q96P64 663 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 IL4I1Q96RQ9 567 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 GPA33Q99795 319 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 COPS4Q9BT78 406 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 RTN4RQ9BZR6 473 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 ADAM19Q9H013 955 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 MCCC2Q9HCC0 563 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 SH2D2AQ9NP31 389 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 CMC2Q9NRP2 79 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 ANKRD10Q9NXR5 420 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 CNOT2Q9NZN8 540 aaKnown RBP5.4□□□□□ -1.54
HMGB3-202ENST00000419110 LRFN1Q9P244 771 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 KLK13Q9UKR3 277 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.4□□□□□ -1.54
HMGB3-202ENST00000419110 HIF3AQ9Y2N7 669 aa5.4□□□□□ -1.54
HMGB3-202ENST00000419110 RPL36Q9Y3U8 105 aaKnown RBP5.4□□□□□ -1.54
HMGB3-202ENST00000419110 ARHGAP21Q5T5U3 1957 aa5.4□□□□□ -1.55
HMGB3-202ENST00000419110 ACACAQ13085 2346 aa5.4□□□□□ -1.55
HMGB3-202ENST00000419110 SPTBN2O15020 2390 aa5.4□□□□□ -1.55
HMGB3-202ENST00000419110 A0A0G2JMM0 328 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 SMIM31A0A1B0GVY4 71 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 A0A1W2PPB8 328 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 A0A1W2PRS3 328 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 DCDC2BA2VCK2 349 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 TRIM64A6NGJ6 449 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 LRRC3CA6NJW4 275 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 SLC22A31A6NKX4 558 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 KIR3DP1A8MWS1 328 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 KDM4EB2RXH2 506 aaPredicted RBP5.39□□□□□ -1.55
HMGB3-202ENST00000419110 MCIDASD6RGH6 385 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 PRR23D1E9PI22 279 aaPredicted RBP5.39□□□□□ -1.55
HMGB3-202ENST00000419110 H3BML4 177 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 BHLHE40O14503 412 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 XKRYO14609 159 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 MYL12BO14950 172 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 XPNPEP2O43895 674 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 PRKYO43930 277 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 FADS2O95864 444 aaKnown RBP5.39□□□□□ -1.55
HMGB3-202ENST00000419110 BGLAPP02818 100 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 MT-ND2P03891 347 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 CD14P08571 375 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 ASAH2BP0C7U1 165 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 PRR23D2P0DMB1 279 aaPredicted RBP5.39□□□□□ -1.55
HMGB3-202ENST00000419110 DBTP11182 482 aaKnown RBP5.39□□□□□ -1.55
HMGB3-202ENST00000419110 APEHP13798 732 aaKnown RBP5.39□□□□□ -1.55
HMGB3-202ENST00000419110 GABRB1P18505 474 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 MYL12AP19105 171 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 FUT1P19526 365 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 FKBP2P26885 142 aaKnown RBP5.39□□□□□ -1.55
HMGB3-202ENST00000419110 GDF1P27539 372 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 GRPRP30550 384 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 TTKP33981 857 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 RPL5P46777 297 aaKnown RBP5.39□□□□□ -1.55
HMGB3-202ENST00000419110 GIPRP48546 466 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 DNASE1L1P49184 302 aa5.39□□□□□ -1.55
HMGB3-202ENST00000419110 DAP3P51398 398 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms