RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 VASH1Q7L8A9 365 aaPredicted RBP11.05□□□□□ -0.64
PTPRF-205ENST00000414879 TMPRSS9Q7Z410 1059 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 MRPL41Q8IXM3 137 aaKnown RBP11.05□□□□□ -0.64
PTPRF-205ENST00000414879 SLC15A4Q8N697 577 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 OR5H2Q8NGV7 314 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 GAB3Q8WWW8 586 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 NECAB3Q96P71 396 aaPredicted RBP11.05□□□□□ -0.64
PTPRF-205ENST00000414879 TAAR9Q96RI9 348 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 MICU1Q9BPX6 476 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 SIRT5Q9NXA8 310 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 H3BMQ9 156 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 DPM1O60762 260 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 TMEM127O75204 238 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 CHRM4P08173 479 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 CD79AP11912 226 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 HOXC5Q00444 222 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 FOXK2Q01167 660 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 GAB1Q13480 694 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 GPR50Q13585 617 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 C4orf36Q96KX1 117 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 DNTTIP1Q9H147 329 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 LIN28AQ9H9Z2 209 aaKnown RBP11.05□□□□□ -0.64
PTPRF-205ENST00000414879 IL20RAQ9UHF4 553 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 KCNG2Q9UJ96 466 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 CAMK2AQ9UQM7 478 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 RASD1Q9Y272 281 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 AGAP5A6NIR3 686 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 FGF17O60258 216 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 CDK2P24941 298 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 ADH7P40394 386 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 EIF4EBP2Q13542 120 aaPredicted RBP11.05□□□□□ -0.64
PTPRF-205ENST00000414879 ZNF169Q14929 603 aaPredicted RBP11.05□□□□□ -0.64
PTPRF-205ENST00000414879 AGERQ15109 404 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 MPEG1Q2M385 716 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 LEXMQ3ZCV2 418 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 PLK5Q496M5 336 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 PGBD2Q6P3X8 592 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 SLC16A14Q7RTX9 510 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 WDR53Q7Z5U6 358 aaPredicted RBP11.05□□□□□ -0.64
PTPRF-205ENST00000414879 SMRP1Q8NCR6 262 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 CHPT1Q8WUD6 406 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 PLA2G2FQ9BZM2 168 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 FKRPQ9H9S5 495 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 A0A1W2PQL4 384 aaPredicted RBP11.05□□□□□ -0.64
PTPRF-205ENST00000414879 UBCP0CG48 685 aaKnown RBP11.05□□□□□ -0.64
PTPRF-205ENST00000414879 IL32P24001 234 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 C21orf58P58505 322 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 NCS1P62166 190 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 GRB2P62993 217 aaKnown RBP11.05□□□□□ -0.64
PTPRF-205ENST00000414879 MADCAM1Q13477 382 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 ACTBL2Q562R1 376 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 MKXQ8IYA7 352 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 CLDN22Q8N7P3 220 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 TNFRSF13CQ96RJ3 184 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 SPIN2AQ99865 258 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 SPIN2BQ9BPZ2 258 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 CACNG6Q9BXT2 260 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 PLCXD1Q9NUJ7 323 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 LOXL2Q9Y4K0 774 aa11.05□□□□□ -0.64
PTPRF-205ENST00000414879 A6NL46 340 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 ZNF850A8MQ14 1090 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 GLCEO94923 617 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 JUNBP17275 347 aaPredicted RBP11.04□□□□□ -0.64
PTPRF-205ENST00000414879 NXPH1P58417 271 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 NLGN4XQ8N0W4 816 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 SLC35A4Q96G79 324 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 TEX37Q96LM6 180 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 CHIAQ9BZP6 476 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 NOSIPQ9Y314 301 aaKnown RBP11.04□□□□□ -0.64
PTPRF-205ENST00000414879 ZNF175Q9Y473 711 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 F5H5K5 113 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 LCMT2O60294 686 aaKnown RBP11.04□□□□□ -0.64
PTPRF-205ENST00000414879 SCG5P05408 212 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 NHSL2Q5HYW2 709 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 ATAD3CQ5T2N8 411 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 ABI3BPQ7Z7G0 1075 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 OR51L1Q8NGJ5 315 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 ZNF582Q96NG8 517 aaPredicted RBP11.04□□□□□ -0.64
PTPRF-205ENST00000414879 ELOVL3Q9HB03 270 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 CHRNA9Q9UGM1 479 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 EBF1Q9UH73 591 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 MUTYHQ9UIF7 546 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 WDR37Q9Y2I8 494 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 PARP14Q460N5 1801 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 IGHV1OR15-9A0A0B4J2B8 117 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 hCG_1807616A0A1W2PRN6 198 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 J3KTA2 159 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 ZNF254O75437 659 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 KCNK2O95069 426 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 POU3F3P20264 500 aaPredicted RBP11.04□□□□□ -0.64
PTPRF-205ENST00000414879 PUDPQ08623 228 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 SF3A2Q15428 464 aaKnown RBP11.04□□□□□ -0.64
PTPRF-205ENST00000414879 LANCL3Q6ZV70 420 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 SLC35D2Q76EJ3 337 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 MRGPRX4Q96LA9 322 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 ALG5Q9Y673 324 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 PLSCR5A0PG75 271 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 WNT11O96014 354 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 ATP1B1P05026 303 aa11.04□□□□□ -0.64
PTPRF-205ENST00000414879 MTNR1BP49286 362 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms