RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 NMT2O60551 498 aa2.56□□□□□ -2
HMGB1P11-201ENST00000413899 YEATS4O95619 227 aa2.56□□□□□ -2
HMGB1P11-201ENST00000413899 AK1P00568 194 aa2.56□□□□□ -2
HMGB1P11-201ENST00000413899 CALCBP10092 127 aa2.56□□□□□ -2
HMGB1P11-201ENST00000413899 CD86P42081 329 aa2.56□□□□□ -2
HMGB1P11-201ENST00000413899 MAGEA5P43359 124 aa2.56□□□□□ -2
HMGB1P11-201ENST00000413899 HMGN5P82970 282 aaKnown RBP2.56□□□□□ -2
HMGB1P11-201ENST00000413899 PSG7Q13046 419 aa2.56□□□□□ -2
HMGB1P11-201ENST00000413899 CCDC183Q5T5S1 534 aa2.56□□□□□ -2
HMGB1P11-201ENST00000413899 LIPNQ5VXI9 398 aa2.56□□□□□ -2
HMGB1P11-201ENST00000413899 ZSCAN25Q6NSZ9 544 aa2.56□□□□□ -2
HMGB1P11-201ENST00000413899 ACSM5Q6NUN0 579 aa2.56□□□□□ -2
HMGB1P11-201ENST00000413899 APTXQ7Z2E3 356 aaKnown RBP2.56□□□□□ -2
HMGB1P11-201ENST00000413899 ERI1Q8IV48 349 aaKnown RBP2.56□□□□□ -2
HMGB1P11-201ENST00000413899 CENPLQ8N0S6 344 aaPredicted RBP2.56□□□□□ -2
HMGB1P11-201ENST00000413899 FADS6Q8N9I5 356 aa2.56□□□□□ -2
HMGB1P11-201ENST00000413899 LINC00301Q8NCQ3 95 aa2.56□□□□□ -2
HMGB1P11-201ENST00000413899 CCDC110Q8TBZ0 833 aa2.56□□□□□ -2
HMGB1P11-201ENST00000413899 ANKRD49Q8WVL7 239 aa2.56□□□□□ -2
HMGB1P11-201ENST00000413899 TAF4BQ92750 862 aa2.56□□□□□ -2
HMGB1P11-201ENST00000413899 ELSPBP1Q96BH3 223 aa2.56□□□□□ -2
HMGB1P11-201ENST00000413899 CELF6Q96J87 481 aaKnown RBP2.56□□□□□ -2
HMGB1P11-201ENST00000413899 CYP2S1Q96SQ9 504 aa2.56□□□□□ -2
HMGB1P11-201ENST00000413899 RNF126Q9BV68 326 aa2.56□□□□□ -2
HMGB1P11-201ENST00000413899 SRXN1Q9BYN0 137 aa2.56□□□□□ -2
HMGB1P11-201ENST00000413899 CLSTN2Q9H4D0 955 aa2.56□□□□□ -2
HMGB1P11-201ENST00000413899 CD209Q9NNX6 404 aa2.56□□□□□ -2
HMGB1P11-201ENST00000413899 AATFQ9NY61 560 aaKnown RBP eCLIP2.56□□□□□ -2
HMGB1P11-201ENST00000413899 RPS6KB2Q9UBS0 482 aa2.56□□□□□ -2
HMGB1P11-201ENST00000413899 CTNNA3Q9UI47 895 aa2.56□□□□□ -2
HMGB1P11-201ENST00000413899 XPO7Q9UIA9 1087 aaKnown RBP2.56□□□□□ -2
HMGB1P11-201ENST00000413899 ANGPTL2Q9UKU9 493 aa2.56□□□□□ -2
HMGB1P11-201ENST00000413899 GSTK1Q9Y2Q3 226 aa2.56□□□□□ -2
HMGB1P11-201ENST00000413899 MAB21L2Q9Y586 359 aa2.56□□□□□ -2
HMGB1P11-201ENST00000413899 PLXNB2O15031 1838 aa2.56□□□□□ -2
HMGB1P11-201ENST00000413899 ANK1P16157 1881 aa2.56□□□□□ -2
HMGB1P11-201ENST00000413899 PLXNA1Q9UIW2 1896 aa2.56□□□□□ -2
HMGB1P11-201ENST00000413899 A0A1W2PNV4 684 aa2.55□□□□□ -2
HMGB1P11-201ENST00000413899 GSAPA4D1B5 854 aa2.55□□□□□ -2
HMGB1P11-201ENST00000413899 H3BMQ9 156 aa2.55□□□□□ -2
HMGB1P11-201ENST00000413899 PANO1I0J062 215 aa2.55□□□□□ -2
HMGB1P11-201ENST00000413899 ZNF861PO60384 105 aa2.55□□□□□ -2
HMGB1P11-201ENST00000413899 ATP8B3O60423 1300 aa2.55□□□□□ -2
HMGB1P11-201ENST00000413899 ECI2O75521 394 aa2.55□□□□□ -2
HMGB1P11-201ENST00000413899 MMP23AO75900 390 aa2.55□□□□□ -2
HMGB1P11-201ENST00000413899 UFL1O94874 794 aa2.55□□□□□ -2
HMGB1P11-201ENST00000413899 MFN2O95140 757 aa2.55□□□□□ -2
HMGB1P11-201ENST00000413899 F10P00742 488 aa2.55□□□□□ -2
HMGB1P11-201ENST00000413899 MMP1P03956 469 aa2.55□□□□□ -2
HMGB1P11-201ENST00000413899 CSF2P04141 144 aa2.55□□□□□ -2
HMGB1P11-201ENST00000413899 OR8U8P0C7N1 319 aa2.55□□□□□ -2
HMGB1P11-201ENST00000413899 U2AF2P26368 475 aaKnown RBP eCLIP2.55□□□□□ -2
HMGB1P11-201ENST00000413899 HOXD10P28358 340 aa2.55□□□□□ -2
HMGB1P11-201ENST00000413899 NTSP30990 170 aa2.55□□□□□ -2
HMGB1P11-201ENST00000413899 RFC4P35249 363 aa2.55□□□□□ -2
HMGB1P11-201ENST00000413899 MDH1P40925 334 aaKnown RBP2.55□□□□□ -2
HMGB1P11-201ENST00000413899 TDO2P48775 406 aa2.55□□□□□ -2
HMGB1P11-201ENST00000413899 CNTNAP1P78357 1384 aa2.55□□□□□ -2
HMGB1P11-201ENST00000413899 CCDC173Q0VFZ6 552 aa2.55□□□□□ -2
HMGB1P11-201ENST00000413899 ORC2Q13416 577 aaPredicted RBP2.55□□□□□ -2
HMGB1P11-201ENST00000413899 MAPK6Q16659 721 aa2.55□□□□□ -2
HMGB1P11-201ENST00000413899 SLC5A12Q1EHB4 618 aa2.55□□□□□ -2
HMGB1P11-201ENST00000413899 RABGAP1LQ5R372 815 aa2.55□□□□□ -2
HMGB1P11-201ENST00000413899 FAM199XQ6PEV8 388 aaPredicted RBP2.55□□□□□ -2
HMGB1P11-201ENST00000413899 WDR74Q6RFH5 385 aaPredicted RBP2.55□□□□□ -2
HMGB1P11-201ENST00000413899 AFTPHQ6ULP2 937 aa2.55□□□□□ -2
HMGB1P11-201ENST00000413899 IL34Q6ZMJ4 242 aa2.55□□□□□ -2
HMGB1P11-201ENST00000413899 DPY19L4Q7Z388 723 aa2.55□□□□□ -2
HMGB1P11-201ENST00000413899 LCA5Q86VQ0 697 aa2.55□□□□□ -2
HMGB1P11-201ENST00000413899 SLC34A3Q8N130 599 aa2.55□□□□□ -2
HMGB1P11-201ENST00000413899 LINC01555Q8NAE3 123 aa2.55□□□□□ -2
HMGB1P11-201ENST00000413899 C7orf33Q8WU49 177 aa2.55□□□□□ -2
HMGB1P11-201ENST00000413899 MYO3BQ8WXR4 1341 aa2.55□□□□□ -2
HMGB1P11-201ENST00000413899 DYNLL2Q96FJ2 89 aa2.55□□□□□ -2
HMGB1P11-201ENST00000413899 C8orf76Q96K31 380 aa2.55□□□□□ -2
HMGB1P11-201ENST00000413899 SLC35E1Q96K37 410 aa2.55□□□□□ -2
HMGB1P11-201ENST00000413899 CRNKL1Q9BZJ0 848 aaKnown RBP2.55□□□□□ -2
HMGB1P11-201ENST00000413899 OR51J1Q9H342 316 aa2.55□□□□□ -2
HMGB1P11-201ENST00000413899 ZDHHC11Q9H8X9 412 aa2.55□□□□□ -2
HMGB1P11-201ENST00000413899 DDX19AQ9NUU7 478 aaKnown RBP2.55□□□□□ -2
HMGB1P11-201ENST00000413899 ATP6V0A2Q9Y487 856 aa2.55□□□□□ -2
HMGB1P11-201ENST00000413899 MCM3APO60318 1980 aa2.54□□□□□ -2
HMGB1P11-201ENST00000413899 MYH9P35579 1960 aaKnown RBP2.54□□□□□ -2
HMGB1P11-201ENST00000413899 PDCD11Q14690 1871 aaKnown RBP2.54□□□□□ -2
HMGB1P11-201ENST00000413899 RALGAPA2Q2PPJ7 1873 aa2.54□□□□□ -2
HMGB1P11-201ENST00000413899 ZNF236Q9UL36 1845 aa2.54□□□□□ -2
HMGB1P11-201ENST00000413899 SF3B1O75533 1304 aaKnown RBP eCLIP2.54□□□□□ -2
HMGB1P11-201ENST00000413899 IGHV2-70DA0A0C4DH43 119 aa2.54□□□□□ -2
HMGB1P11-201ENST00000413899 RGSL1A5PLK6 1076 aa2.54□□□□□ -2
HMGB1P11-201ENST00000413899 K7N7A8 449 aa2.54□□□□□ -2
HMGB1P11-201ENST00000413899 MSH4O15457 936 aa2.54□□□□□ -2
HMGB1P11-201ENST00000413899 UGT2B17O75795 530 aa2.54□□□□□ -2
HMGB1P11-201ENST00000413899 BBOX1O75936 387 aa2.54□□□□□ -2
HMGB1P11-201ENST00000413899 DEXIO95424 95 aa2.54□□□□□ -2
HMGB1P11-201ENST00000413899 DIRAS3O95661 229 aa2.54□□□□□ -2
HMGB1P11-201ENST00000413899 PGCP20142 388 aa2.54□□□□□ -2
HMGB1P11-201ENST00000413899 NT5EP21589 574 aa2.54□□□□□ -2
HMGB1P11-201ENST00000413899 GABRR1P24046 479 aa2.54□□□□□ -2
HMGB1P11-201ENST00000413899 AQP1P29972 269 aa2.54□□□□□ -2
HMGB1P11-201ENST00000413899 NDUFA8P51970 172 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms