RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 INSM2Q96T92 566 aaPredicted RBP7.83□□□□□ -1.16
SCN9A-203ENST00000409672 IER2Q9BTL4 223 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 PREBQ9HCU5 417 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 CLEC1BQ9P126 229 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 OR2T1O43869 369 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 ELAVL4P26378 380 aaKnown RBP7.83□□□□□ -1.16
SCN9A-203ENST00000409672 ZNF404Q494X3 552 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 PHLDA2Q53GA4 152 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 ZNF529Q6P280 563 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 NPSR1Q6W5P4 371 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 AQP12AQ8IXF9 295 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 SLC35B2Q8TB61 432 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 OCSTAMPQ9BR26 566 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 EGLN3Q9H6Z9 239 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 OR6C2Q9NZP2 312 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 INMT-MINDY4F8WBC2 141 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 H3BMQ9 156 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 HNRNPFP52597 415 aaKnown RBP7.83□□□□□ -1.16
SCN9A-203ENST00000409672 PCBD1P61457 104 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 KIR2DS3Q14952 304 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 C18orf63Q68DL7 685 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 ZNF439Q8NDP4 499 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 MIB2Q96AX9 1013 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 TMEM45AQ9NWC5 275 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 MAB21L2Q9Y586 359 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 C10orf71Q711Q0 1435 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 COL2A1P02458 1487 aaPredicted RBP7.83□□□□□ -1.16
SCN9A-203ENST00000409672 ARPC5O15511 151 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 SPRY3O43610 288 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 SOX15O60248 233 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 APOC3P02656 99 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 PMP2P02689 132 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 HMGN2P05204 90 aaKnown RBP7.83□□□□□ -1.16
SCN9A-203ENST00000409672 GLYR1Q49A26 553 aaPredicted RBP7.83□□□□□ -1.16
SCN9A-203ENST00000409672 ZNF789Q5FWF6 425 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 CST9Q5W186 159 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 GAREM2Q75VX8 874 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 ANKLE1Q8NAG6 615 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 POTEKPQ9BYX7 375 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 NMNAT1Q9HAN9 279 aaPredicted RBP7.83□□□□□ -1.16
SCN9A-203ENST00000409672 FBXO24O75426 580 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 IL2RAP01589 272 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 TRAM1Q15629 374 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 OR8G2PQ6IF36 304 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 BRICD5Q6PL45 260 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 CMTM2Q8TAZ6 248 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 ROBO4Q8WZ75 1007 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 MAF1Q9H063 256 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 DDX31Q9H8H2 851 aaKnown RBP7.83□□□□□ -1.16
SCN9A-203ENST00000409672 LPAR2Q9HBW0 351 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 THSD1Q9NS62 852 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 UBR2Q8IWV8 1755 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 GOSR1O95249 250 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 UTS2O95399 124 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 MT-ND4P03905 459 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 CD63P08962 238 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 PRKACAP17612 351 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 PRDX3P30048 256 aaKnown RBP7.83□□□□□ -1.16
SCN9A-203ENST00000409672 MEDAGQ5VYS4 303 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 OR13C2Q8NGS9 318 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 PFDN5Q99471 154 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 C6orf106Q9H6K1 298 aaPredicted RBP7.83□□□□□ -1.16
SCN9A-203ENST00000409672 SPHK1Q9NYA1 384 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 LGALS13Q9UHV8 139 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 RP1P56715 2156 aa7.83□□□□□ -1.16
SCN9A-203ENST00000409672 C5orf49A4QMS7 147 aa7.82□□□□□ -1.16
SCN9A-203ENST00000409672 P2RY10O00398 339 aa7.82□□□□□ -1.16
SCN9A-203ENST00000409672 PHYHO14832 338 aa7.82□□□□□ -1.16
SCN9A-203ENST00000409672 HPGDSO60760 199 aa7.82□□□□□ -1.16
SCN9A-203ENST00000409672 ARHGEF15O94989 841 aa7.82□□□□□ -1.16
SCN9A-203ENST00000409672 AKR7A3O95154 331 aa7.82□□□□□ -1.16
SCN9A-203ENST00000409672 OR8U8P0C7N1 319 aa7.82□□□□□ -1.16
SCN9A-203ENST00000409672 CLDN6P56747 220 aa7.82□□□□□ -1.16
SCN9A-203ENST00000409672 RING1Q06587 406 aa7.82□□□□□ -1.16
SCN9A-203ENST00000409672 MGAT3Q09327 533 aa7.82□□□□□ -1.16
SCN9A-203ENST00000409672 ACSM3Q53FZ2 586 aa7.82□□□□□ -1.16
SCN9A-203ENST00000409672 SPNS3Q6ZMD2 512 aa7.82□□□□□ -1.16
SCN9A-203ENST00000409672 CPEB2Q7Z5Q1 589 aaKnown RBP7.82□□□□□ -1.16
SCN9A-203ENST00000409672 MYADMQ96S97 322 aa7.82□□□□□ -1.16
SCN9A-203ENST00000409672 LMF2Q9BU23 707 aaKnown RBP7.82□□□□□ -1.16
SCN9A-203ENST00000409672 SLC35A3Q9Y2D2 325 aa7.82□□□□□ -1.16
SCN9A-203ENST00000409672 RAB3DO95716 219 aa7.82□□□□□ -1.16
SCN9A-203ENST00000409672 ATP1B3P54709 279 aa7.82□□□□□ -1.16
SCN9A-203ENST00000409672 ZBED5Q49AG3 693 aa7.82□□□□□ -1.16
SCN9A-203ENST00000409672 BPIFA2Q96DR5 249 aa7.82□□□□□ -1.16
SCN9A-203ENST00000409672 UBQLN4Q9NRR5 601 aa7.82□□□□□ -1.16
SCN9A-203ENST00000409672 DEGS1O15121 323 aa7.82□□□□□ -1.16
SCN9A-203ENST00000409672 PPIHO43447 177 aaKnown RBP7.82□□□□□ -1.16
SCN9A-203ENST00000409672 SERPINF1P36955 418 aa7.82□□□□□ -1.16
SCN9A-203ENST00000409672 TPMTP51580 245 aa7.82□□□□□ -1.16
SCN9A-203ENST00000409672 CLDN12P56749 244 aa7.82□□□□□ -1.16
SCN9A-203ENST00000409672 GPLD1P80108 840 aa7.82□□□□□ -1.16
SCN9A-203ENST00000409672 WDTC1Q8N5D0 677 aa7.82□□□□□ -1.16
SCN9A-203ENST00000409672 OR6F1Q8NGZ6 308 aa7.82□□□□□ -1.16
SCN9A-203ENST00000409672 PRR14Q9BWN1 585 aa7.82□□□□□ -1.16
SCN9A-203ENST00000409672 KLF16Q9BXK1 252 aaPredicted RBP7.82□□□□□ -1.16
SCN9A-203ENST00000409672 TSPAN11A1L157 253 aa7.82□□□□□ -1.16
SCN9A-203ENST00000409672 ANTXRLA6NF34 631 aa7.82□□□□□ -1.16
SCN9A-203ENST00000409672 FOXA1P55317 472 aa7.82□□□□□ -1.16
SCN9A-203ENST00000409672 NCS1P62166 190 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms