RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 MT-ATP6P00846 226 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 STSP08842 583 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 FTH1P19P0C7X4 201 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 CD53P19397 219 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 CHMP24386 653 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 IL2RGP31785 369 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 PTGS2P35354 604 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 SNRPD2P62316 118 aaKnown RBP4.63□□□□□ -1.67
SCN3A-203ENST00000409101 TUBA1BP68363 451 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 TUBA4AP68366 448 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 ILKQ13418 452 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 SQSTM1Q13501 440 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 RUNX2Q13950 521 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 FAM53BQ14153 422 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 GPR176Q14439 515 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 LTC4SQ16873 150 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 PMS2CLQ68D20 193 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 FAM199XQ6PEV8 388 aaPredicted RBP4.63□□□□□ -1.67
SCN3A-203ENST00000409101 TUBA1AQ71U36 451 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 MEX3DQ86XN8 651 aaKnown RBP4.63□□□□□ -1.67
SCN3A-203ENST00000409101 SLC35F3Q8IY50 421 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 GALNT16Q8N428 558 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 OR11G2Q8NGC1 345 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 OR9Q2Q8NGE9 314 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 NT5CQ8TCD5 201 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 LMF1Q96S06 567 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 SYT3Q9BQG1 590 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 ALG8Q9BVK2 526 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 RTL8AQ9BWD3 113 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 PFDN2Q9UHV9 154 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 TSPAN11A1L157 253 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 SMIM30A4D0T7 59 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 EME2A4GXA9 379 aaPredicted RBP4.63□□□□□ -1.67
SCN3A-203ENST00000409101 FRG2CA6NGY1 282 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 PATE3B3GLJ2 98 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 ZNF593O00488 134 aaPredicted RBP4.63□□□□□ -1.67
SCN3A-203ENST00000409101 CBR3O75828 277 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 COX6B1P14854 86 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 CD22P20273 847 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 AP2S1P53680 142 aaPredicted RBP4.63□□□□□ -1.67
SCN3A-203ENST00000409101 HBA1P69905 142 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 RNF4P78317 190 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 SCGB2A2Q13296 93 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 OR8G1Q15617 311 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 RTL6Q6ICC9 239 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 TCTN3Q6NUS6 607 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 PODNL1Q6PEZ8 512 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 FCRLAQ7L513 359 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 STEAP2Q8NFT2 490 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 CHPT1Q8WUD6 406 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 ZCCHC14Q8WYQ9 949 aaKnown RBP4.63□□□□□ -1.67
SCN3A-203ENST00000409101 FEVQ99581 238 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 KCNJ16Q9NPI9 418 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 PRDM6Q9NQX0 595 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 MYEF2Q9P2K5 600 aaKnown RBP4.63□□□□□ -1.67
SCN3A-203ENST00000409101 NME7Q9Y5B8 376 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 LINC01387J3KSC0 135 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 ZNF195O14628 629 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 ICOSLGO75144 302 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 NXPH2O95156 264 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 VAMP5O95183 116 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 CHRNB1P11230 501 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 SERPINA2P20848 420 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 ELAVL4P26378 380 aaKnown RBP4.63□□□□□ -1.67
SCN3A-203ENST00000409101 EIF2S3P41091 472 aaKnown RBP4.63□□□□□ -1.67
SCN3A-203ENST00000409101 MFAP5Q13361 173 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 PAGE3Q5JUK9 113 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 C1orf87Q8N0U7 546 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 SLC43A2Q8N370 569 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 OR1L3Q8NH93 324 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 ZNF417Q8TAU3 575 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 IL1F10Q8WWZ1 152 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 HSD17B8Q92506 261 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 FGF11Q92914 225 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 ZNF582Q96NG8 517 aaPredicted RBP4.63□□□□□ -1.67
SCN3A-203ENST00000409101 ZNF300Q96RE9 604 aaPredicted RBP4.63□□□□□ -1.67
SCN3A-203ENST00000409101 FUZQ9BT04 418 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 SEMA4CQ9C0C4 833 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 LAT2Q9GZY6 243 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 ESRP2Q9H6T0 727 aaKnown RBP4.63□□□□□ -1.67
SCN3A-203ENST00000409101 A4GALTQ9NPC4 353 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 SERGEFQ9UGK8 458 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 EBF1Q9UH73 591 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 NDRG4Q9ULP0 352 aaKnown RBP4.63□□□□□ -1.67
SCN3A-203ENST00000409101 B3GALT1Q9Y5Z6 326 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 TNS1Q9HBL0 1735 aaKnown RBP4.63□□□□□ -1.67
SCN3A-203ENST00000409101 SLC22A23A1A5C7 686 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 ATXN7O15265 892 aaPredicted RBP4.63□□□□□ -1.67
SCN3A-203ENST00000409101 DNAJB6O75190 326 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 GRPP07492 148 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 FOLR1P15328 257 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 CR2P20023 1033 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 IVDP26440 423 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 ARL3P36405 182 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 PPICP45877 212 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 ZNF92Q03936 586 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 FAPQ12884 760 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 KCNAB2Q13303 367 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 TCTN1Q2MV58 587 aa4.63□□□□□ -1.67
SCN3A-203ENST00000409101 XKRXQ6PP77 449 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms