RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 TEX51A0A1B0GUA7 166 aa7.57□□□□□ -1.2
PTPRD-204ENST00000397606 FAM183AA6NL82 134 aa7.57□□□□□ -1.2
PTPRD-204ENST00000397606 LOC110117498-PIK3R3F6TDL0 507 aa7.57□□□□□ -1.2
PTPRD-204ENST00000397606 E2F2Q14209 437 aa7.57□□□□□ -1.2
PTPRD-204ENST00000397606 EIF2B1Q14232 305 aaKnown RBP7.57□□□□□ -1.2
PTPRD-204ENST00000397606 RSBN1Q5VWQ0 802 aaPredicted RBP7.57□□□□□ -1.2
PTPRD-204ENST00000397606 LIPKQ5VXJ0 399 aa7.57□□□□□ -1.2
PTPRD-204ENST00000397606 TMEM53Q6P2H8 277 aa7.57□□□□□ -1.2
PTPRD-204ENST00000397606 KLHL17Q6TDP4 642 aa7.57□□□□□ -1.2
PTPRD-204ENST00000397606 JAGN1Q8N5M9 183 aa7.57□□□□□ -1.2
PTPRD-204ENST00000397606 CHST4Q8NCG5 386 aa7.57□□□□□ -1.2
PTPRD-204ENST00000397606 OR10G3Q8NGC4 313 aa7.57□□□□□ -1.2
PTPRD-204ENST00000397606 PTPMT1Q8WUK0 201 aaPredicted RBP7.57□□□□□ -1.2
PTPRD-204ENST00000397606 GIMAP5Q96F15 307 aa7.57□□□□□ -1.2
PTPRD-204ENST00000397606 ARHGDIGQ99819 225 aa7.57□□□□□ -1.2
PTPRD-204ENST00000397606 CDH20Q9HBT6 801 aa7.57□□□□□ -1.2
PTPRD-204ENST00000397606 KLHL9Q9P2J3 617 aa7.57□□□□□ -1.2
PTPRD-204ENST00000397606 SH3BGRL2Q9UJC5 107 aa7.57□□□□□ -1.2
PTPRD-204ENST00000397606 ZNF208O43345 1280 aa7.57□□□□□ -1.2
PTPRD-204ENST00000397606 CRYABP02511 175 aaKnown RBP7.57□□□□□ -1.2
PTPRD-204ENST00000397606 HCKP08631 526 aa7.57□□□□□ -1.2
PTPRD-204ENST00000397606 CEACAM1P13688 526 aa7.57□□□□□ -1.2
PTPRD-204ENST00000397606 MAP2K4P45985 399 aa7.57□□□□□ -1.2
PTPRD-204ENST00000397606 SLC37A1P57057 533 aa7.57□□□□□ -1.2
PTPRD-204ENST00000397606 FOXK2Q01167 660 aa7.57□□□□□ -1.2
PTPRD-204ENST00000397606 PIGFQ07326 219 aa7.57□□□□□ -1.2
PTPRD-204ENST00000397606 MPEG1Q2M385 716 aa7.57□□□□□ -1.2
PTPRD-204ENST00000397606 NIPAL3Q6P499 406 aa7.57□□□□□ -1.2
PTPRD-204ENST00000397606 CROCCP3Q8IVE0 287 aa7.57□□□□□ -1.2
PTPRD-204ENST00000397606 GATAD2BQ8WXI9 593 aa7.57□□□□□ -1.2
PTPRD-204ENST00000397606 ALG8Q9BVK2 526 aa7.57□□□□□ -1.2
PTPRD-204ENST00000397606 UBQLN3Q9H347 655 aa7.57□□□□□ -1.2
PTPRD-204ENST00000397606 CLEC4AQ9UMR7 237 aa7.57□□□□□ -1.2
PTPRD-204ENST00000397606 DHDHQ9UQ10 334 aa7.57□□□□□ -1.2
PTPRD-204ENST00000397606 hCG_2014768A0A024R1R8 64 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 IQCMA0A1B0GVH7 501 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 ARRDC5A6NEK1 342 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 TAF4O00268 1085 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 SLC16A6O15403 523 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 ATE1O95260 518 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 RAB40ALP0C0E4 278 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 SMIM10L1P0DMW3 83 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 LIPCP11150 499 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 BIDP55957 195 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 WNT4P56705 351 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 CHAF1BQ13112 559 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 TAB1Q15750 504 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 ZNF141Q15928 474 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 GLYR1Q49A26 553 aaPredicted RBP7.56□□□□□ -1.2
PTPRD-204ENST00000397606 SYT14P1Q58G82 188 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 MRGPREQ86SM8 312 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 ZBTB46Q86UZ6 589 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 PFN4Q8NHR9 129 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 ZNF420Q8TAQ5 688 aaPredicted RBP7.56□□□□□ -1.2
PTPRD-204ENST00000397606 STK35Q8TDR2 534 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 FGF11Q92914 225 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 SMIM10Q96HG1 83 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 TGIF2Q9GZN2 237 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 DEFB127Q9H1M4 99 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 CHST11Q9NPF2 352 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 PLEK2Q9NYT0 353 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 POU2F3Q9UKI9 436 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 HDGFL3Q9Y3E1 203 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 KLK4Q9Y5K2 254 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 TRBV5-3A0A0A0MS03 114 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 DCDC2BA2VCK2 349 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 TTLL8A6PVC2 850 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 M0R082 166 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 PRRG2O14669 202 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 PIP5K1CO60331 668 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 CD79AP11912 226 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 POLR2IP36954 125 aaKnown RBP7.56□□□□□ -1.2
PTPRD-204ENST00000397606 PSG6Q00889 435 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 IL18Q14116 193 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 ZNF791Q3KP31 576 aaPredicted RBP7.56□□□□□ -1.2
PTPRD-204ENST00000397606 SLX4IPQ5VYV7 408 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 LIX1LQ8IVB5 337 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 TMEM52Q8NDY8 209 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 OR11G2Q8NGC1 345 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 ZNF417Q8TAU3 575 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 COX4I2Q96KJ9 171 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 ZNF587Q96SQ5 575 aaPredicted RBP7.56□□□□□ -1.2
PTPRD-204ENST00000397606 PTTG2Q9NZH5 202 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 DAPK2Q9UIK4 370 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 LOC102725191A0A1B0GVB3 256 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 C7orf72A4D263 438 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 TVP23AA6NH52 213 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 M0R129 80 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 MTRF1O75570 445 aaKnown RBP7.56□□□□□ -1.2
PTPRD-204ENST00000397606 CSTBP04080 98 aaKnown RBP7.56□□□□□ -1.2
PTPRD-204ENST00000397606 GYPBP06028 91 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 GNAO1P09471 354 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 FAUP35544 74 aaKnown RBP7.56□□□□□ -1.2
PTPRD-204ENST00000397606 SOX2P48431 317 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 PRKXP51817 358 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 KIRREL2Q6UWL6 708 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 GALNTL5Q7Z4T8 443 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 APOBEC4Q8WW27 367 aaKnown RBP7.56□□□□□ -1.2
PTPRD-204ENST00000397606 DIABLOQ9NR28 239 aa7.56□□□□□ -1.2
PTPRD-204ENST00000397606 B3GALT5Q9Y2C3 310 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms