RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 SCARB2Q14108 478 aa12.12□□□□□ -0.47
CXCL12-205ENST00000395794 TMEM108Q6UXF1 575 aa12.12□□□□□ -0.47
CXCL12-205ENST00000395794 AAED1Q7RTV5 226 aa12.12□□□□□ -0.47
CXCL12-205ENST00000395794 ABHD12BQ7Z5M8 362 aaPredicted RBP12.12□□□□□ -0.47
CXCL12-205ENST00000395794 MSRB3Q8IXL7 192 aa12.12□□□□□ -0.47
CXCL12-205ENST00000395794 DEPDC4Q8N2C3 294 aa12.12□□□□□ -0.47
CXCL12-205ENST00000395794 TMEM99Q8N816 258 aa12.12□□□□□ -0.47
CXCL12-205ENST00000395794 BHLHE22Q8NFJ8 381 aaPredicted RBP12.12□□□□□ -0.47
CXCL12-205ENST00000395794 OR52N5Q8NH56 324 aa12.12□□□□□ -0.47
CXCL12-205ENST00000395794 STK35Q8TDR2 534 aa12.12□□□□□ -0.47
CXCL12-205ENST00000395794 SMAP2Q8WU79 429 aaPredicted RBP12.12□□□□□ -0.47
CXCL12-205ENST00000395794 GTPBP3Q969Y2 492 aaKnown RBP12.12□□□□□ -0.47
CXCL12-205ENST00000395794 C3orf49Q96BT1 292 aa12.12□□□□□ -0.47
CXCL12-205ENST00000395794 TRMT61AQ96FX7 289 aaKnown RBP12.12□□□□□ -0.47
CXCL12-205ENST00000395794 Q96MF0 132 aa12.12□□□□□ -0.47
CXCL12-205ENST00000395794 PIF1Q9H611 641 aa12.12□□□□□ -0.47
CXCL12-205ENST00000395794 TMEM38AQ9H6F2 299 aa12.12□□□□□ -0.47
CXCL12-205ENST00000395794 NPHS2Q9NP85 383 aa12.12□□□□□ -0.47
CXCL12-205ENST00000395794 FAIMQ9NVQ4 179 aa12.12□□□□□ -0.47
CXCL12-205ENST00000395794 NDUFAF1Q9Y375 327 aa12.12□□□□□ -0.47
CXCL12-205ENST00000395794 GMEB1Q9Y692 573 aa12.12□□□□□ -0.47
CXCL12-205ENST00000395794 MED13LQ71F56 2210 aa12.12□□□□□ -0.47
CXCL12-205ENST00000395794 A0A0G2JND7 137 aa12.11□□□□□ -0.47
CXCL12-205ENST00000395794 DPRXA6NFQ7 191 aa12.11□□□□□ -0.47
CXCL12-205ENST00000395794 FRS3O43559 492 aa12.11□□□□□ -0.47
CXCL12-205ENST00000395794 PNMTP11086 282 aa12.11□□□□□ -0.47
CXCL12-205ENST00000395794 GPX2P18283 190 aa12.11□□□□□ -0.47
CXCL12-205ENST00000395794 ATP5J2P56134 94 aa12.11□□□□□ -0.47
CXCL12-205ENST00000395794 HOXC5Q00444 222 aa12.11□□□□□ -0.47
CXCL12-205ENST00000395794 ZNF672Q499Z4 452 aaPredicted RBP12.11□□□□□ -0.47
CXCL12-205ENST00000395794 KLHL24Q6TFL4 600 aa12.11□□□□□ -0.47
CXCL12-205ENST00000395794 C5orf46Q6UWT4 87 aa12.11□□□□□ -0.47
CXCL12-205ENST00000395794 ATG4DQ86TL0 474 aaPredicted RBP12.11□□□□□ -0.47
CXCL12-205ENST00000395794 KRTAP1-3Q8IUG1 177 aa12.11□□□□□ -0.47
CXCL12-205ENST00000395794 POMGNT2Q8NAT1 580 aa12.11□□□□□ -0.47
CXCL12-205ENST00000395794 OR52E4Q8NGH9 312 aa12.11□□□□□ -0.47
CXCL12-205ENST00000395794 RNF217Q8TC41 542 aa12.11□□□□□ -0.47
CXCL12-205ENST00000395794 DNAJA4Q8WW22 397 aaPredicted RBP12.11□□□□□ -0.47
CXCL12-205ENST00000395794 TMEM45BQ96B21 275 aa12.11□□□□□ -0.47
CXCL12-205ENST00000395794 SLC25A36Q96CQ1 311 aa12.11□□□□□ -0.47
CXCL12-205ENST00000395794 MUS81Q96NY9 551 aa12.11□□□□□ -0.47
CXCL12-205ENST00000395794 TRIM2Q9C040 744 aa12.11□□□□□ -0.47
CXCL12-205ENST00000395794 ALG2Q9H553 416 aa12.11□□□□□ -0.47
CXCL12-205ENST00000395794 SLC52A3Q9NQ40 469 aa12.11□□□□□ -0.47
CXCL12-205ENST00000395794 MGAT4BQ9UQ53 548 aa12.11□□□□□ -0.47
CXCL12-205ENST00000395794 ANGPT4Q9Y264 503 aa12.11□□□□□ -0.47
CXCL12-205ENST00000395794 RASD1Q9Y272 281 aa12.11□□□□□ -0.47
CXCL12-205ENST00000395794 CHST2Q9Y4C5 530 aa12.11□□□□□ -0.47
CXCL12-205ENST00000395794 TRBV5-3A0A0A0MS03 114 aa12.1□□□□□ -0.47
CXCL12-205ENST00000395794 OR6C65A6NJZ3 312 aa12.1□□□□□ -0.47
CXCL12-205ENST00000395794 ABCD4O14678 606 aa12.1□□□□□ -0.47
CXCL12-205ENST00000395794 OR2T1O43869 369 aa12.1□□□□□ -0.47
CXCL12-205ENST00000395794 EDF1O60869 148 aaKnown RBP12.1□□□□□ -0.47
CXCL12-205ENST00000395794 PAX1P15863 534 aa12.1□□□□□ -0.47
CXCL12-205ENST00000395794 PTAFRP25105 342 aa12.1□□□□□ -0.47
CXCL12-205ENST00000395794 AQP1P29972 269 aa12.1□□□□□ -0.47
CXCL12-205ENST00000395794 NTF4P34130 210 aa12.1□□□□□ -0.47
CXCL12-205ENST00000395794 ZNF83P51522 516 aa12.1□□□□□ -0.47
CXCL12-205ENST00000395794 GABRA6Q16445 453 aa12.1□□□□□ -0.47
CXCL12-205ENST00000395794 CYP51A1Q16850 503 aa12.1□□□□□ -0.47
CXCL12-205ENST00000395794 C1QTNF12Q5T7M4 302 aa12.1□□□□□ -0.47
CXCL12-205ENST00000395794 TSPO2Q5TGU0 170 aa12.1□□□□□ -0.47
CXCL12-205ENST00000395794 C9orf135Q5VTT2 229 aa12.1□□□□□ -0.47
CXCL12-205ENST00000395794 METTL21CQ5VZV1 264 aa12.1□□□□□ -0.47
CXCL12-205ENST00000395794 DHRS4L2Q6PKH6 230 aa12.1□□□□□ -0.47
CXCL12-205ENST00000395794 DHDDSQ86SQ9 333 aa12.1□□□□□ -0.47
CXCL12-205ENST00000395794 ARMC8Q8IUR7 673 aa12.1□□□□□ -0.47
CXCL12-205ENST00000395794 C17orf78Q8N4C9 275 aa12.1□□□□□ -0.47
CXCL12-205ENST00000395794 LSMEM1Q8N8F7 131 aa12.1□□□□□ -0.47
CXCL12-205ENST00000395794 C11orf65Q8NCR3 313 aa12.1□□□□□ -0.47
CXCL12-205ENST00000395794 HIPK4Q8NE63 616 aa12.1□□□□□ -0.47
CXCL12-205ENST00000395794 C1orf162Q8NEQ5 155 aaPredicted RBP12.1□□□□□ -0.47
CXCL12-205ENST00000395794 KBTBD8Q8NFY9 601 aa12.1□□□□□ -0.47
CXCL12-205ENST00000395794 MFSD8Q8NHS3 518 aa12.1□□□□□ -0.47
CXCL12-205ENST00000395794 TSPEARQ8WU66 669 aa12.1□□□□□ -0.47
CXCL12-205ENST00000395794 SLCO5A1Q9H2Y9 848 aa12.1□□□□□ -0.47
CXCL12-205ENST00000395794 GSX1Q9H4S2 264 aaPredicted RBP12.1□□□□□ -0.47
CXCL12-205ENST00000395794 EVA1AQ9H8M9 152 aa12.1□□□□□ -0.47
CXCL12-205ENST00000395794 C12orf10Q9HB07 376 aa12.1□□□□□ -0.47
CXCL12-205ENST00000395794 TMEM27Q9HBJ8 222 aa12.1□□□□□ -0.47
CXCL12-205ENST00000395794 SLC7A10Q9NS82 523 aa12.1□□□□□ -0.47
CXCL12-205ENST00000395794 MRGBPQ9NV56 204 aa12.1□□□□□ -0.47
CXCL12-205ENST00000395794 ZNF701Q9NV72 531 aaPredicted RBP12.1□□□□□ -0.47
CXCL12-205ENST00000395794 CISD1Q9NZ45 108 aaKnown RBP12.1□□□□□ -0.47
CXCL12-205ENST00000395794 POU2F3Q9UKI9 436 aa12.1□□□□□ -0.47
CXCL12-205ENST00000395794 AMDHD2Q9Y303 409 aa12.1□□□□□ -0.47
CXCL12-205ENST00000395794 MAGED1Q9Y5V3 778 aaPredicted RBP12.1□□□□□ -0.47
CXCL12-205ENST00000395794 TMEM229AB2RXF0 380 aa12.09□□□□□ -0.47
CXCL12-205ENST00000395794 H7C1Q1 480 aa12.09□□□□□ -0.47
CXCL12-205ENST00000395794 M0R1B8 84 aa12.09□□□□□ -0.47
CXCL12-205ENST00000395794 ITGA5P08648 1049 aa12.09□□□□□ -0.47
CXCL12-205ENST00000395794 TROVE2P10155 538 aaKnown RBP eCLIP12.09□□□□□ -0.47
CXCL12-205ENST00000395794 CDH2P19022 906 aaPredicted RBP12.09□□□□□ -0.47
CXCL12-205ENST00000395794 MPGP29372 298 aa12.09□□□□□ -0.47
CXCL12-205ENST00000395794 RPS5P46782 204 aaKnown RBP12.09□□□□□ -0.47
CXCL12-205ENST00000395794 CDH11P55287 796 aa12.09□□□□□ -0.47
CXCL12-205ENST00000395794 RGS8P57771 180 aaPredicted RBP12.09□□□□□ -0.47
CXCL12-205ENST00000395794 IL1RL1Q01638 556 aa12.09□□□□□ -0.47
CXCL12-205ENST00000395794 RBBP4Q09028 425 aa12.09□□□□□ -0.47
CXCL12-205ENST00000395794 NFYCQ13952 458 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms