RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 TUBA1AQ71U36 451 aa18.36■□□□□ 0.53
TRAF4-203ENST00000394925 CMIPQ8IY22 773 aa18.36■□□□□ 0.53
TRAF4-203ENST00000394925 RFLNBQ8N5W9 214 aa18.36■□□□□ 0.53
TRAF4-203ENST00000394925 ANKFN1Q8N957 763 aa18.36■□□□□ 0.53
TRAF4-203ENST00000394925 KIF18AQ8NI77 898 aa18.36■□□□□ 0.53
TRAF4-203ENST00000394925 SLC35A5Q9BS91 424 aa18.36■□□□□ 0.53
TRAF4-203ENST00000394925 RAB1BQ9H0U4 201 aa18.36■□□□□ 0.53
TRAF4-203ENST00000394925 SLC38A1Q9H2H9 487 aa18.36■□□□□ 0.53
TRAF4-203ENST00000394925 PLK3Q9H4B4 646 aa18.36■□□□□ 0.53
TRAF4-203ENST00000394925 AKTIPQ9H8T0 292 aa18.36■□□□□ 0.53
TRAF4-203ENST00000394925 TENM1Q9UKZ4 2725 aa18.35■□□□□ 0.53
TRAF4-203ENST00000394925 CFAP73A6NFT4 308 aa18.35■□□□□ 0.53
TRAF4-203ENST00000394925 AGAP5A6NIR3 686 aa18.35■□□□□ 0.53
TRAF4-203ENST00000394925 AQP7P3A6NL99 342 aa18.35■□□□□ 0.53
TRAF4-203ENST00000394925 ZNF587BE7ETH6 402 aa18.35■□□□□ 0.53
TRAF4-203ENST00000394925 NR5A2O00482 541 aa18.35■□□□□ 0.53
TRAF4-203ENST00000394925 PDE5AO76074 875 aa18.35■□□□□ 0.53
TRAF4-203ENST00000394925 IL2RGP31785 369 aa18.35■□□□□ 0.53
TRAF4-203ENST00000394925 SRP14P37108 136 aaKnown RBP18.35■□□□□ 0.53
TRAF4-203ENST00000394925 PPOXP50336 477 aa18.35■□□□□ 0.53
TRAF4-203ENST00000394925 IDH3GP51553 393 aaPredicted RBP18.35■□□□□ 0.53
TRAF4-203ENST00000394925 NAAAQ02083 359 aa18.35■□□□□ 0.53
TRAF4-203ENST00000394925 EFNB3Q15768 340 aa18.35■□□□□ 0.53
TRAF4-203ENST00000394925 SMU1Q2TAY7 513 aa18.35■□□□□ 0.53
TRAF4-203ENST00000394925 TMEM225Q6GV28 225 aa18.35■□□□□ 0.53
TRAF4-203ENST00000394925 WDR60Q8WVS4 1066 aa18.35■□□□□ 0.53
TRAF4-203ENST00000394925 ALKBH3Q96Q83 286 aaPredicted RBP18.35■□□□□ 0.53
TRAF4-203ENST00000394925 A0A096LPE4 126 aa18.34■□□□□ 0.53
TRAF4-203ENST00000394925 A0A1W2PPZ6 126 aa18.34■□□□□ 0.53
TRAF4-203ENST00000394925 FAAHO00519 579 aa18.34■□□□□ 0.53
TRAF4-203ENST00000394925 BPGMP07738 259 aa18.34■□□□□ 0.53
TRAF4-203ENST00000394925 CHRM4P08173 479 aa18.34■□□□□ 0.53
TRAF4-203ENST00000394925 CECR9P0C854 216 aa18.34■□□□□ 0.53
TRAF4-203ENST00000394925 DAOP14920 347 aa18.34■□□□□ 0.53
TRAF4-203ENST00000394925 UQCRBP14927 111 aa18.34■□□□□ 0.53
TRAF4-203ENST00000394925 IL7RP16871 459 aa18.34■□□□□ 0.53
TRAF4-203ENST00000394925 CXCR1P25024 350 aa18.34■□□□□ 0.53
TRAF4-203ENST00000394925 CALCRP30988 508 aa18.34■□□□□ 0.53
TRAF4-203ENST00000394925 SELENOPP49908 381 aa18.34■□□□□ 0.53
TRAF4-203ENST00000394925 EPS8Q12929 822 aa18.34■□□□□ 0.53
TRAF4-203ENST00000394925 CASP8Q14790 479 aa18.34■□□□□ 0.53
TRAF4-203ENST00000394925 MRPL2Q5T653 305 aaKnown RBP18.34■□□□□ 0.53
TRAF4-203ENST00000394925 RNF130Q86XS8 419 aa18.34■□□□□ 0.53
TRAF4-203ENST00000394925 EIF1ADQ8N9N8 165 aaKnown RBP18.34■□□□□ 0.53
TRAF4-203ENST00000394925 BCL2L2Q92843 193 aaPredicted RBP18.34■□□□□ 0.53
TRAF4-203ENST00000394925 TRNT1Q96Q11 434 aaKnown RBP18.34■□□□□ 0.53
TRAF4-203ENST00000394925 ADAM19Q9H013 955 aa18.34■□□□□ 0.53
TRAF4-203ENST00000394925 PIF1Q9H611 641 aa18.34■□□□□ 0.53
TRAF4-203ENST00000394925 SEC61A2Q9H9S3 476 aa18.34■□□□□ 0.53
TRAF4-203ENST00000394925 ADPRHL2Q9NX46 363 aa18.34■□□□□ 0.53
TRAF4-203ENST00000394925 TMEFF2Q9UIK5 374 aaPredicted RBP18.34■□□□□ 0.53
TRAF4-203ENST00000394925 NUDT17P0C025 328 aa18.33■□□□□ 0.52
TRAF4-203ENST00000394925 ITGA2P17301 1181 aa18.33■□□□□ 0.52
TRAF4-203ENST00000394925 GIFP27352 417 aa18.33■□□□□ 0.52
TRAF4-203ENST00000394925 APEX1P27695 318 aaKnown RBP18.33■□□□□ 0.52
TRAF4-203ENST00000394925 CHN2P52757 468 aa18.33■□□□□ 0.52
TRAF4-203ENST00000394925 BNIP2Q12982 314 aa18.33■□□□□ 0.52
TRAF4-203ENST00000394925 GNA13Q14344 377 aa18.33■□□□□ 0.52
TRAF4-203ENST00000394925 ZSWIM7Q19AV6 140 aa18.33■□□□□ 0.52
TRAF4-203ENST00000394925 SPANXN4Q5MJ08 99 aa18.33■□□□□ 0.52
TRAF4-203ENST00000394925 LRRC74BQ6ZQY2 392 aa18.33■□□□□ 0.52
TRAF4-203ENST00000394925 LINGO2Q7L985 606 aa18.33■□□□□ 0.52
TRAF4-203ENST00000394925 ZCCHC24Q8N2G6 241 aaKnown RBP18.33■□□□□ 0.52
TRAF4-203ENST00000394925 TESCQ96BS2 214 aa18.33■□□□□ 0.52
TRAF4-203ENST00000394925 ZIM3Q96PE6 472 aa18.33■□□□□ 0.52
TRAF4-203ENST00000394925 CRNNQ9UBG3 495 aaPredicted RBP18.33■□□□□ 0.52
TRAF4-203ENST00000394925 ARPC4-TTLL3A0A0A6YYG9 625 aa18.32■□□□□ 0.52
TRAF4-203ENST00000394925 hCG_2039718K7EN88 272 aa18.32■□□□□ 0.52
TRAF4-203ENST00000394925 ITM2AO43736 263 aa18.32■□□□□ 0.52
TRAF4-203ENST00000394925 LILRA1O75019 489 aa18.32■□□□□ 0.52
TRAF4-203ENST00000394925 UPK3AO75631 287 aa18.32■□□□□ 0.52
TRAF4-203ENST00000394925 SNUPNO95149 360 aaKnown RBP18.32■□□□□ 0.52
TRAF4-203ENST00000394925 PAX7P23759 505 aa18.32■□□□□ 0.52
TRAF4-203ENST00000394925 RUNX1T1Q06455 604 aa18.32■□□□□ 0.52
TRAF4-203ENST00000394925 GSTA3Q16772 222 aa18.32■□□□□ 0.52
TRAF4-203ENST00000394925 NIPAL3Q6P499 406 aa18.32■□□□□ 0.52
TRAF4-203ENST00000394925 CREB3L2Q70SY1 520 aa18.32■□□□□ 0.52
TRAF4-203ENST00000394925 RIBC1Q8N443 379 aaPredicted RBP18.32■□□□□ 0.52
TRAF4-203ENST00000394925 LINC01356Q8N9X3 169 aa18.32■□□□□ 0.52
TRAF4-203ENST00000394925 OR4F15Q8NGB8 312 aa18.32■□□□□ 0.52
TRAF4-203ENST00000394925 NEU4Q8WWR8 484 aaPredicted RBP18.32■□□□□ 0.52
TRAF4-203ENST00000394925 SNX18Q96RF0 628 aa18.32■□□□□ 0.52
TRAF4-203ENST00000394925 TAPBPLQ9BX59 468 aa18.32■□□□□ 0.52
TRAF4-203ENST00000394925 MTHFD2LQ9H903 347 aaPredicted RBP18.32■□□□□ 0.52
TRAF4-203ENST00000394925 RLIMQ9NVW2 624 aa18.32■□□□□ 0.52
TRAF4-203ENST00000394925 IGLV1-44P01699 117 aa18.31■□□□□ 0.52
TRAF4-203ENST00000394925 DBIP07108 87 aaKnown RBP18.31■□□□□ 0.52
TRAF4-203ENST00000394925 ERCC1P07992 297 aaPredicted RBP18.31■□□□□ 0.52
TRAF4-203ENST00000394925 TACSTD2P09758 323 aa18.31■□□□□ 0.52
TRAF4-203ENST00000394925 GKN3PP0CG01 181 aa18.31■□□□□ 0.52
TRAF4-203ENST00000394925 CREB1P16220 341 aa18.31■□□□□ 0.52
TRAF4-203ENST00000394925 RPS4Y1P22090 263 aaKnown RBP18.31■□□□□ 0.52
TRAF4-203ENST00000394925 THBS4P35443 961 aa18.31■□□□□ 0.52
TRAF4-203ENST00000394925 P2RY4P51582 365 aa18.31■□□□□ 0.52
TRAF4-203ENST00000394925 HGFACQ04756 655 aa18.31■□□□□ 0.52
TRAF4-203ENST00000394925 C3orf36Q3SXR2 165 aa18.31■□□□□ 0.52
TRAF4-203ENST00000394925 FAM174BQ3ZCQ3 159 aa18.31■□□□□ 0.52
TRAF4-203ENST00000394925 MEX3DQ86XN8 651 aaKnown RBP18.31■□□□□ 0.52
TRAF4-203ENST00000394925 NUDCD3Q8IVD9 361 aa18.31■□□□□ 0.52
TRAF4-203ENST00000394925 CADM2Q8N3J6 435 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms