RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 OR6C68A6NDL8 312 aa12.35□□□□□ -0.43
GTF2F1-201ENST00000394456 PIN1P1O15428 100 aa12.35□□□□□ -0.43
GTF2F1-201ENST00000394456 ZNF10P21506 573 aaPredicted RBP12.35□□□□□ -0.43
GTF2F1-201ENST00000394456 ATP12AP54707 1039 aa12.35□□□□□ -0.43
GTF2F1-201ENST00000394456 ZNF267Q14586 743 aaPredicted RBP12.35□□□□□ -0.43
GTF2F1-201ENST00000394456 MOSPD2Q8NHP6 518 aa12.35□□□□□ -0.43
GTF2F1-201ENST00000394456 ACOT12Q8WYK0 555 aa12.35□□□□□ -0.43
GTF2F1-201ENST00000394456 IRF2BPLQ9H1B7 796 aa12.35□□□□□ -0.43
GTF2F1-201ENST00000394456 ING3Q9NXR8 418 aa12.35□□□□□ -0.43
GTF2F1-201ENST00000394456 NKIRAS2Q9NYR9 191 aa12.35□□□□□ -0.43
GTF2F1-201ENST00000394456 ZNF222Q9UK12 451 aa12.35□□□□□ -0.43
GTF2F1-201ENST00000394456 FLVCR2Q9UPI3 526 aa12.35□□□□□ -0.43
GTF2F1-201ENST00000394456 CACNA1CQ13936 2221 aa12.35□□□□□ -0.43
GTF2F1-201ENST00000394456 DMDP11532 3685 aa12.35□□□□□ -0.43
GTF2F1-201ENST00000394456 MEN1O00255 615 aa12.35□□□□□ -0.43
GTF2F1-201ENST00000394456 FOXS1O43638 330 aa12.35□□□□□ -0.43
GTF2F1-201ENST00000394456 ALX3O95076 343 aa12.35□□□□□ -0.43
GTF2F1-201ENST00000394456 EPXP11678 715 aa12.35□□□□□ -0.43
GTF2F1-201ENST00000394456 POU3F3P20264 500 aaPredicted RBP12.35□□□□□ -0.43
GTF2F1-201ENST00000394456 RPL4P36578 427 aaKnown RBP12.35□□□□□ -0.43
GTF2F1-201ENST00000394456 NRG3P56975 720 aa12.35□□□□□ -0.43
GTF2F1-201ENST00000394456 ZNF613Q6PF04 617 aa12.35□□□□□ -0.43
GTF2F1-201ENST00000394456 ZNF511Q8NB15 262 aa12.35□□□□□ -0.43
GTF2F1-201ENST00000394456 LGALS14Q8TCE9 139 aa12.35□□□□□ -0.43
GTF2F1-201ENST00000394456 PIGKQ92643 395 aa12.35□□□□□ -0.43
GTF2F1-201ENST00000394456 ZNF426Q9BUY5 554 aa12.35□□□□□ -0.43
GTF2F1-201ENST00000394456 CEP192Q8TEP8 1941 aa12.35□□□□□ -0.43
GTF2F1-201ENST00000394456 SEC16AO15027 2179 aa12.35□□□□□ -0.43
GTF2F1-201ENST00000394456 TP53BP1Q12888 1972 aaPredicted RBP12.35□□□□□ -0.43
GTF2F1-201ENST00000394456 FAM221BA6H8Z2 402 aa12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 H7C1C5 153 aa12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 CFL1P23528 166 aaKnown RBP12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 RBMS1P29558 406 aaKnown RBP12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 BLKP51451 505 aa12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 NANOS3P60323 173 aaKnown RBP12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 LCN6P62502 163 aa12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 RPS15P62841 145 aaKnown RBP12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 MAB21L1Q13394 359 aa12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 TNK1Q13470 666 aa12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 COL13A1Q5TAT6 717 aaPredicted RBP12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 RTL4Q6ZR62 310 aa12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 C9orf62Q8N4C0 152 aa12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 ZNF655Q8N720 491 aaPredicted RBP12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 OR6C4Q8NGE1 309 aa12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 CREB3L1Q96BA8 519 aa12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 CLIP3Q96DZ5 547 aa12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 MSANTD3Q96H12 275 aa12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 NKX3-1Q99801 234 aaPredicted RBP12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 TSPAN10Q9H1Z9 355 aaPredicted RBP12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 POMT2Q9UKY4 750 aa12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 TMEM131Q92545 1883 aa12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 TRBV2A0A0J9YWF9 115 aa12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 NOTOA8MTQ0 251 aa12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 CENPBD1B2RD01 187 aa12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 WISP1O95388 367 aa12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 GPANK1O95872 356 aa12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 EDNRAP25101 427 aa12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 CDK5R1Q15078 307 aa12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 FAAP20Q6NZ36 180 aa12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 SLC35F2Q8IXU6 374 aa12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 ZNF321PQ8N8H1 164 aa12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 LMX1AQ8TE12 382 aa12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 GHITMQ9H3K2 345 aa12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 NOX4Q9NPH5 578 aa12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 TMEM5Q9Y2B1 443 aa12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 KLHDC2Q9Y2U9 406 aa12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 TMEM184BQ9Y519 407 aaPredicted RBP12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 FRYLO94915 3013 aa12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 EML5Q05BV3 1969 aa12.34□□□□□ -0.43
GTF2F1-201ENST00000394456 GMDSO60547 372 aa12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 RPP14O95059 124 aaKnown RBP12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 TCRBP04435 133 aa12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 GALP22466 123 aa12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 PTBP1P26599 531 aaKnown RBP eCLIP12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 SLC6A6P31641 620 aa12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 PLA2G7Q13093 441 aa12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 SFRP4Q6FHJ7 346 aaPredicted RBP12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 ZNF433Q8N7K0 673 aaPredicted RBP12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 NPEPL1Q8NDH3 523 aa12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 SNX33Q8WV41 574 aa12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 RGP1Q92546 391 aaPredicted RBP12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 MED28Q9H204 178 aa12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 ZFP64Q9NPA5 681 aa12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 NCDNQ9UBB6 729 aa12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 SPACA6W5XKT8 324 aa12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 UNC13CQ8NB66 2214 aa12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 ARID1BQ8NFD5 2236 aaPredicted RBP12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 MPDZO75970 2070 aa12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 TEX13CA0A0J9YWL9 993 aa12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 FMO6PO60774 539 aa12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 SDC3O75056 442 aa12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 SIRPAP78324 504 aa12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 MRPL28Q13084 256 aaKnown RBP12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 ST3GAL2Q16842 350 aa12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 KANSL1Q7Z3B3 1105 aa12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 LIX1LQ8IVB5 337 aa12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 GPALPP1Q8IXQ4 340 aa12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 CMTM4Q8IZR5 234 aa12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 C19orf47Q8N9M1 422 aaKnown RBP12.33□□□□□ -0.44
GTF2F1-201ENST00000394456 RIT1Q92963 219 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms